Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.92□□□□□ -1.94
SNHG28P0DPA3 RPL39P38-201ENST00000467018 153 ntBASIC2.92□□□□□ -1.94
SNHG28P0DPA3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.92□□□□□ -1.94
SNHG28P0DPA3 AC010469.2-201ENST00000496412 480 ntBASIC2.92□□□□□ -1.94
SNHG28P0DPA3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.92□□□□□ -1.94
SNHG28P0DPA3 AC130289.1-201ENST00000577321 73 ntBASIC2.92□□□□□ -1.94
SNHG28P0DPA3 MIR548AC-201ENST00000585049 88 ntBASIC2.92□□□□□ -1.94
SNHG28P0DPA3 VN1R91P-201ENST00000594377 169 ntBASIC2.92□□□□□ -1.94
SNHG28P0DPA3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.92□□□□□ -1.94
SNHG28P0DPA3 CTSLP2-204ENST00000629029 392 ntBASIC2.92□□□□□ -1.94
SNHG28P0DPA3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
SNHG28P0DPA3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.92□□□□□ -1.94
SNHG28P0DPA3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
SNHG28P0DPA3 UBE2L2-201ENST00000254302 429 ntBASIC2.91□□□□□ -1.94
SNHG28P0DPA3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
SNHG28P0DPA3 RNU6-212P-201ENST00000362642 104 ntBASIC2.91□□□□□ -1.94
SNHG28P0DPA3 RNU5A-1-201ENST00000362698 116 ntBASIC2.91□□□□□ -1.94
SNHG28P0DPA3 SNORD50.1-201ENST00000362987 71 ntBASIC2.91□□□□□ -1.94
SNHG28P0DPA3 Y_RNA.84-201ENST00000363011 104 ntBASIC2.91□□□□□ -1.94
SNHG28P0DPA3 RNU6-774P-201ENST00000363238 107 ntBASIC2.91□□□□□ -1.94
SNHG28P0DPA3 SNORA7.2-201ENST00000364446 145 ntBASIC2.91□□□□□ -1.94
SNHG28P0DPA3 Y_RNA.274-201ENST00000364714 101 ntBASIC2.91□□□□□ -1.94
SNHG28P0DPA3 RNU6-200P-201ENST00000364743 107 ntBASIC2.91□□□□□ -1.94
SNHG28P0DPA3 RNA5SP210-201ENST00000391034 120 ntBASIC2.91□□□□□ -1.94
SNHG28P0DPA3 RNU6-1203P-201ENST00000410703 110 ntBASIC2.91□□□□□ -1.94
SNHG28P0DPA3 DAP3P1-201ENST00000441522 278 ntBASIC2.91□□□□□ -1.94
SNHG28P0DPA3 RNU6-953P-201ENST00000459154 107 ntBASIC2.91□□□□□ -1.94
SNHG28P0DPA3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.91□□□□□ -1.94
SNHG28P0DPA3 MIR5696-201ENST00000578474 85 ntBASIC2.91□□□□□ -1.94
SNHG28P0DPA3 MIR3690-201ENST00000580266 75 ntBASIC2.91□□□□□ -1.94
SNHG28P0DPA3 MIR4273-201ENST00000582824 84 ntBASIC2.91□□□□□ -1.94
SNHG28P0DPA3 MIR5092-201ENST00000583139 88 ntBASIC2.91□□□□□ -1.94
SNHG28P0DPA3 AC010620.2-201ENST00000600135 313 ntBASIC2.91□□□□□ -1.94
SNHG28P0DPA3 RMST_4.1-201ENST00000616886 107 ntBASIC2.91□□□□□ -1.94
SNHG28P0DPA3 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.91□□□□□ -1.94
SNHG28P0DPA3 AC130454.1-201ENST00000622948 401 ntBASIC2.91□□□□□ -1.94
SNHG28P0DPA3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.91□□□□□ -1.94
SNHG28P0DPA3 AC116096.1-201ENST00000566804 2314 ntBASIC2.91□□□□□ -1.94
SNHG28P0DPA3 AC009487.2-201ENST00000420969 6821 ntBASIC2.9□□□□□ -1.94
SNHG28P0DPA3 AC016717.2-201ENST00000609089 5141 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SNHG28P0DPA3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SNHG28P0DPA3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SNHG28P0DPA3 OR56A5-201ENST00000340110 738 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
SNHG28P0DPA3 Y_RNA.20-201ENST00000362479 113 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 RNU6-37P-201ENST00000362692 107 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 Y_RNA.150-201ENST00000363562 102 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 SNORD27-201ENST00000363981 72 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 RNU6-11P-201ENST00000364234 107 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 DYNLT3P1-201ENST00000378574 347 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 RNU6-25P-201ENST00000383873 107 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 RNU6-1-201ENST00000383898 107 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 RNU6-48P-201ENST00000384161 107 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 RNU6-36P-201ENST00000384172 107 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 RNU6-4P-201ENST00000384205 107 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 RNU6-5P-201ENST00000384238 107 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 RNU6-611P-201ENST00000384276 104 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 Y_RNA.471-201ENST00000384312 102 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 RNU6-3P-201ENST00000384314 107 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 RNU6-16P-201ENST00000384385 107 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 RNU6-15P-201ENST00000384534 107 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 RNU6-2-201ENST00000384627 107 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 RNU6-29P-201ENST00000384637 107 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 RNU6-9-201ENST00000384776 107 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 RNU6-33P-201ENST00000384793 107 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 MIR592-201ENST00000384959 97 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 AL359511.1-201ENST00000402970 211 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 AL513475.1-201ENST00000406602 315 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 RNA5SP494-201ENST00000410653 129 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 MYL8P-204ENST00000431574 518 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 CKS1BP5-201ENST00000434172 273 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.9□□□□□ -1.95
SNHG28P0DPA3 HMGN2P16-201ENST00000456802 261 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 U8.22-201ENST00000459141 133 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 RPL37P6-201ENST00000460682 294 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 TRBVB-201ENST00000477100 408 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 RPL31P60-201ENST00000478450 367 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 HSPE1P6-201ENST00000479457 291 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.9□□□□□ -1.95
SNHG28P0DPA3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.9□□□□□ -1.95
SNHG28P0DPA3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.9□□□□□ -1.95
SNHG28P0DPA3 AC004584.2-201ENST00000570407 410 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 AC136932.1-201ENST00000574771 208 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 MIR4643-201ENST00000577473 78 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 MIR5692A1-201ENST00000580523 69 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 AL133393.1-201ENST00000603277 287 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 RNU6-6P-201ENST00000606623 107 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 AC034102.8-201ENST00000615146 484 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.9□□□□□ -1.95
SNHG28P0DPA3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.9□□□□□ -1.95
SNHG28P0DPA3 AC090617.7-201ENST00000623952 126 ntBASIC2.9□□□□□ -1.95
SNHG28P0DPA3 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SNHG28P0DPA3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SNHG28P0DPA3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SNHG28P0DPA3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SNHG28P0DPA3 Y_RNA.16-201ENST00000362421 102 ntBASIC2.89□□□□□ -1.95
SNHG28P0DPA3 Y_RNA.117-201ENST00000363294 101 ntBASIC2.89□□□□□ -1.95
SNHG28P0DPA3 RNU6-595P-201ENST00000363944 107 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms