Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 SNRPGP17-201ENST00000603780 214 ntBASIC2.02□□□□□ -2.09
ATG4BQ9Y4P1 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
ATG4BQ9Y4P1 AL357078.3-201ENST00000607528 618 ntBASIC2.02□□□□□ -2.09
ATG4BQ9Y4P1 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.01□□□□□ -2.09
ATG4BQ9Y4P1 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
ATG4BQ9Y4P1 RNU1-23P-201ENST00000363361 144 ntBASIC2.01□□□□□ -2.09
ATG4BQ9Y4P1 RNU6-82P-201ENST00000363970 107 ntBASIC2.01□□□□□ -2.09
ATG4BQ9Y4P1 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
ATG4BQ9Y4P1 AL355497.1-201ENST00000406262 551 ntBASIC2.01□□□□□ -2.09
ATG4BQ9Y4P1 MIR1261-201ENST00000408659 82 ntBASIC2.01□□□□□ -2.09
ATG4BQ9Y4P1 C8orf59P1-201ENST00000429930 303 ntBASIC2.01□□□□□ -2.09
ATG4BQ9Y4P1 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.01□□□□□ -2.09
ATG4BQ9Y4P1 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.01□□□□□ -2.09
ATG4BQ9Y4P1 AC090255.1-201ENST00000495779 349 ntBASIC2.01□□□□□ -2.09
ATG4BQ9Y4P1 Y_RNA.654-201ENST00000497848 106 ntBASIC2.01□□□□□ -2.09
ATG4BQ9Y4P1 AC022447.4-201ENST00000504053 364 ntBASIC2.01□□□□□ -2.09
ATG4BQ9Y4P1 SNORA19.2-201ENST00000516013 114 ntBASIC2.01□□□□□ -2.09
ATG4BQ9Y4P1 RNU2-19P-201ENST00000517288 84 ntBASIC2.01□□□□□ -2.09
ATG4BQ9Y4P1 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.01□□□□□ -2.09
ATG4BQ9Y4P1 AC025423.5-201ENST00000550230 219 ntBASIC2.01□□□□□ -2.09
ATG4BQ9Y4P1 ELOCP5-201ENST00000604924 333 ntBASIC2.01□□□□□ -2.09
ATG4BQ9Y4P1 AL356157.2-201ENST00000605122 111 ntBASIC2.01□□□□□ -2.09
ATG4BQ9Y4P1 AC103705.1-201ENST00000619013 241 ntBASIC2.01□□□□□ -2.09
ATG4BQ9Y4P1 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
ATG4BQ9Y4P1 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
ATG4BQ9Y4P1 AP000560.1-201ENST00000624150 1937 ntBASIC2□□□□□ -2.09
ATG4BQ9Y4P1 Y_RNA.38-201ENST00000362617 102 ntBASIC2□□□□□ -2.09
ATG4BQ9Y4P1 Y_RNA.231-201ENST00000364358 102 ntBASIC2□□□□□ -2.09
ATG4BQ9Y4P1 RNU6-611P-201ENST00000384276 104 ntBASIC2□□□□□ -2.09
ATG4BQ9Y4P1 RNU6-1215P-201ENST00000384441 102 ntBASIC2□□□□□ -2.09
ATG4BQ9Y4P1 Y_RNA.516-201ENST00000384541 124 ntBASIC2□□□□□ -2.09
ATG4BQ9Y4P1 Y_RNA.554-201ENST00000384672 102 ntBASIC2□□□□□ -2.09
ATG4BQ9Y4P1 RPS29P13-201ENST00000402041 169 ntBASIC2□□□□□ -2.09
ATG4BQ9Y4P1 HMGB3P2-201ENST00000411913 584 ntBASIC2□□□□□ -2.09
ATG4BQ9Y4P1 HMGN2P38-201ENST00000423806 265 ntBASIC2□□□□□ -2.09
ATG4BQ9Y4P1 MTCO1P20-201ENST00000425366 358 ntBASIC2□□□□□ -2.09
ATG4BQ9Y4P1 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2□□□□□ -2.09
ATG4BQ9Y4P1 AL353752.1-201ENST00000454946 260 ntBASIC2□□□□□ -2.09
ATG4BQ9Y4P1 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2□□□□□ -2.09
ATG4BQ9Y4P1 RNU6-1208P-201ENST00000459588 107 ntBASIC2□□□□□ -2.09
ATG4BQ9Y4P1 AC083904.1-201ENST00000487828 231 ntBASIC2□□□□□ -2.09
ATG4BQ9Y4P1 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2□□□□□ -2.09
ATG4BQ9Y4P1 AC091885.1-201ENST00000506658 268 ntBASIC2□□□□□ -2.09
ATG4BQ9Y4P1 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2□□□□□ -2.09
ATG4BQ9Y4P1 SNORD60.2-201ENST00000516883 86 ntBASIC2□□□□□ -2.09
ATG4BQ9Y4P1 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2□□□□□ -2.09
ATG4BQ9Y4P1 AC104576.1-201ENST00000524225 88 ntBASIC2□□□□□ -2.09
ATG4BQ9Y4P1 EIF1P4-201ENST00000572664 335 ntBASIC2□□□□□ -2.09
ATG4BQ9Y4P1 RPS3AP23-202ENST00000574601 686 ntBASIC2□□□□□ -2.09
ATG4BQ9Y4P1 AC139792.2-201ENST00000624218 587 ntBASIC2□□□□□ -2.09
ATG4BQ9Y4P1 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2□□□□□ -2.09
ATG4BQ9Y4P1 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2□□□□□ -2.09
ATG4BQ9Y4P1 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2□□□□□ -2.09
ATG4BQ9Y4P1 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.99□□□□□ -2.09
ATG4BQ9Y4P1 AL596028.1-201ENST00000326971 197 ntBASIC1.99□□□□□ -2.09
ATG4BQ9Y4P1 RNU6-1285P-201ENST00000363480 105 ntBASIC1.99□□□□□ -2.09
ATG4BQ9Y4P1 RNU6-1274P-201ENST00000384557 107 ntBASIC1.99□□□□□ -2.09
ATG4BQ9Y4P1 SNORA64-201ENST00000384674 134 ntBASIC1.99□□□□□ -2.09
ATG4BQ9Y4P1 MIR181A1-201ENST00000385026 110 ntBASIC1.99□□□□□ -2.09
ATG4BQ9Y4P1 MIR514A2-201ENST00000385131 88 ntBASIC1.99□□□□□ -2.09
ATG4BQ9Y4P1 MIR514A3-201ENST00000385132 88 ntBASIC1.99□□□□□ -2.09
ATG4BQ9Y4P1 RNU6-1106P-201ENST00000390845 107 ntBASIC1.99□□□□□ -2.09
ATG4BQ9Y4P1 HMGN2P39-201ENST00000398005 273 ntBASIC1.99□□□□□ -2.09
ATG4BQ9Y4P1 AL023284.1-201ENST00000403956 276 ntBASIC1.99□□□□□ -2.09
ATG4BQ9Y4P1 RNU2-48P-201ENST00000410694 191 ntBASIC1.99□□□□□ -2.09
ATG4BQ9Y4P1 CBX3P6-201ENST00000430257 527 ntBASIC1.99□□□□□ -2.09
ATG4BQ9Y4P1 MTND3P21-201ENST00000433774 331 ntBASIC1.99□□□□□ -2.09
ATG4BQ9Y4P1 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.99□□□□□ -2.09
ATG4BQ9Y4P1 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.99□□□□□ -2.09
ATG4BQ9Y4P1 AC055731.1-201ENST00000474387 401 ntBASIC1.99□□□□□ -2.09
ATG4BQ9Y4P1 RPL39P5-202ENST00000512505 151 ntBASIC1.99□□□□□ -2.09
ATG4BQ9Y4P1 SNORA4.4-201ENST00000515921 135 ntBASIC1.99□□□□□ -2.09
ATG4BQ9Y4P1 IGKV3-31-201ENST00000523109 329 ntBASIC1.99□□□□□ -2.09
ATG4BQ9Y4P1 AC022616.8-201ENST00000533569 253 ntBASIC1.99□□□□□ -2.09
ATG4BQ9Y4P1 AP000763.2-201ENST00000540641 163 ntBASIC1.99□□□□□ -2.09
ATG4BQ9Y4P1 RNU6-89P-201ENST00000606519 100 ntBASIC1.99□□□□□ -2.09
ATG4BQ9Y4P1 DISC2.1-201ENST00000612827 205 ntBASIC1.99□□□□□ -2.09
ATG4BQ9Y4P1 AC063943.3-201ENST00000615562 356 ntBASIC1.99□□□□□ -2.09
ATG4BQ9Y4P1 FER-210ENST00000628534 558 ntTSL 5 BASIC1.99□□□□□ -2.09
ATG4BQ9Y4P1 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.99□□□□□ -2.09
ATG4BQ9Y4P1 MIR1321-201ENST00000637766 79 ntBASIC1.99□□□□□ -2.09
ATG4BQ9Y4P1 AC068137.3-201ENST00000639191 341 ntBASIC1.99□□□□□ -2.09
ATG4BQ9Y4P1 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
ATG4BQ9Y4P1 AC008555.8-201ENST00000623602 2168 ntBASIC1.99□□□□□ -2.09
ATG4BQ9Y4P1 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
ATG4BQ9Y4P1 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
ATG4BQ9Y4P1 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
ATG4BQ9Y4P1 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
ATG4BQ9Y4P1 RNU4-12P-201ENST00000365233 139 ntBASIC1.98□□□□□ -2.09
ATG4BQ9Y4P1 Y_RNA.373-201ENST00000365600 103 ntBASIC1.98□□□□□ -2.09
ATG4BQ9Y4P1 RNU6-546P-201ENST00000383991 107 ntBASIC1.98□□□□□ -2.09
ATG4BQ9Y4P1 RNU6-43P-201ENST00000384302 107 ntBASIC1.98□□□□□ -2.09
ATG4BQ9Y4P1 SNORA67.3-201ENST00000384366 140 ntBASIC1.98□□□□□ -2.09
ATG4BQ9Y4P1 RNU6-908P-201ENST00000410160 94 ntBASIC1.98□□□□□ -2.09
ATG4BQ9Y4P1 RN7SKP32-201ENST00000410167 303 ntBASIC1.98□□□□□ -2.09
ATG4BQ9Y4P1 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
ATG4BQ9Y4P1 ARL5AP1-201ENST00000418991 388 ntBASIC1.98□□□□□ -2.09
ATG4BQ9Y4P1 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.98□□□□□ -2.09
ATG4BQ9Y4P1 RPS15AP10-201ENST00000432472 382 ntBASIC1.98□□□□□ -2.09
ATG4BQ9Y4P1 ERLEC1P1-201ENST00000433806 578 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 179.3 ms