Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.1□□□□□ -2.23
LRRC39Q96DD0 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.1□□□□□ -2.23
LRRC39Q96DD0 RNA5SP404-201ENST00000517118 132 ntBASIC1.1□□□□□ -2.23
LRRC39Q96DD0 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.1□□□□□ -2.23
LRRC39Q96DD0 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.1□□□□□ -2.23
LRRC39Q96DD0 AC008521.1-201ENST00000587471 187 ntBASIC1.1□□□□□ -2.23
LRRC39Q96DD0 AC105148.1-201ENST00000604961 409 ntBASIC1.1□□□□□ -2.23
LRRC39Q96DD0 AC016727.1-205ENST00000605437 569 ntBASIC1.1□□□□□ -2.23
LRRC39Q96DD0 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.1□□□□□ -2.23
LRRC39Q96DD0 AC097372.5-201ENST00000623665 376 ntBASIC1.1□□□□□ -2.23
LRRC39Q96DD0 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.09□□□□□ -2.23
LRRC39Q96DD0 RNU6-105P-201ENST00000363909 104 ntBASIC1.09□□□□□ -2.23
LRRC39Q96DD0 SNORA24.1-201ENST00000384401 135 ntBASIC1.09□□□□□ -2.23
LRRC39Q96DD0 MIR513A1-201ENST00000385138 129 ntBASIC1.09□□□□□ -2.23
LRRC39Q96DD0 RNU6-1176P-201ENST00000390955 107 ntBASIC1.09□□□□□ -2.23
LRRC39Q96DD0 AC078809.1-201ENST00000427601 140 ntBASIC1.09□□□□□ -2.23
LRRC39Q96DD0 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.09□□□□□ -2.23
LRRC39Q96DD0 AC099677.2-201ENST00000436385 175 ntBASIC1.09□□□□□ -2.23
LRRC39Q96DD0 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.09□□□□□ -2.23
LRRC39Q96DD0 AC132479.1-201ENST00000449160 144 ntBASIC1.09□□□□□ -2.23
LRRC39Q96DD0 USP9YP25-201ENST00000457708 443 ntBASIC1.09□□□□□ -2.23
LRRC39Q96DD0 snoU13.30-201ENST00000458951 104 ntBASIC1.09□□□□□ -2.23
LRRC39Q96DD0 Y_RNA.638-201ENST00000459374 113 ntBASIC1.09□□□□□ -2.23
LRRC39Q96DD0 AL049829.1-201ENST00000465411 156 ntBASIC1.09□□□□□ -2.23
LRRC39Q96DD0 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.09□□□□□ -2.23
LRRC39Q96DD0 RNU6-685P-201ENST00000517088 95 ntBASIC1.09□□□□□ -2.23
LRRC39Q96DD0 AC109479.2-201ENST00000517842 174 ntBASIC1.09□□□□□ -2.23
LRRC39Q96DD0 AC087883.1-201ENST00000551882 391 ntBASIC1.09□□□□□ -2.23
LRRC39Q96DD0 MIR4498-201ENST00000577599 66 ntBASIC1.09□□□□□ -2.23
LRRC39Q96DD0 BNIP3P16-201ENST00000589779 534 ntBASIC1.09□□□□□ -2.23
LRRC39Q96DD0 AC110760.3-201ENST00000598794 467 ntBASIC1.09□□□□□ -2.23
LRRC39Q96DD0 VN1R107P-201ENST00000601784 209 ntBASIC1.09□□□□□ -2.23
LRRC39Q96DD0 AC083806.3-201ENST00000614016 455 ntBASIC1.09□□□□□ -2.23
LRRC39Q96DD0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.09□□□□□ -2.23
LRRC39Q96DD0 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.09□□□□□ -2.24
LRRC39Q96DD0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.08□□□□□ -2.24
LRRC39Q96DD0 SNORA63D-201ENST00000364359 132 ntBASIC1.08□□□□□ -2.24
LRRC39Q96DD0 RNU6-809P-201ENST00000384461 107 ntBASIC1.08□□□□□ -2.24
LRRC39Q96DD0 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.08□□□□□ -2.24
LRRC39Q96DD0 SNX2P2-201ENST00000424553 323 ntBASIC1.08□□□□□ -2.24
LRRC39Q96DD0 RPS6P15-201ENST00000431996 751 ntBASIC1.08□□□□□ -2.24
LRRC39Q96DD0 ATP5J2P3-201ENST00000451550 258 ntBASIC1.08□□□□□ -2.24
LRRC39Q96DD0 ATP5EP1-201ENST00000510257 156 ntBASIC1.08□□□□□ -2.24
LRRC39Q96DD0 MTND4LP18-201ENST00000526864 291 ntBASIC1.08□□□□□ -2.24
LRRC39Q96DD0 AP001893.2-201ENST00000526949 202 ntBASIC1.08□□□□□ -2.24
LRRC39Q96DD0 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.08□□□□□ -2.24
LRRC39Q96DD0 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.08□□□□□ -2.24
LRRC39Q96DD0 MIR4509-3-201ENST00000578671 94 ntBASIC1.08□□□□□ -2.24
LRRC39Q96DD0 MIR4509-2-201ENST00000583920 94 ntBASIC1.08□□□□□ -2.24
LRRC39Q96DD0 AC103810.9-201ENST00000606688 112 ntBASIC1.08□□□□□ -2.24
LRRC39Q96DD0 AC004492.1-201ENST00000607036 742 ntBASIC1.08□□□□□ -2.24
LRRC39Q96DD0 MIR4509-1-201ENST00000618224 94 ntBASIC1.08□□□□□ -2.24
LRRC39Q96DD0 AL031667.3-201ENST00000620124 655 ntBASIC1.08□□□□□ -2.24
LRRC39Q96DD0 AC009033.1-201ENST00000624279 431 ntBASIC1.08□□□□□ -2.24
LRRC39Q96DD0 AL159152.1-201ENST00000635019 2587 ntBASIC1.07□□□□□ -2.24
LRRC39Q96DD0 RNU6-862P-201ENST00000362804 105 ntBASIC1.07□□□□□ -2.24
LRRC39Q96DD0 Y_RNA.327-201ENST00000365201 102 ntBASIC1.07□□□□□ -2.24
LRRC39Q96DD0 SNORA22-201ENST00000383907 134 ntBASIC1.07□□□□□ -2.24
LRRC39Q96DD0 SNORA32.2-201ENST00000384049 122 ntBASIC1.07□□□□□ -2.24
LRRC39Q96DD0 SNORA22C-201ENST00000384614 134 ntBASIC1.07□□□□□ -2.24
LRRC39Q96DD0 MRPL42P2-201ENST00000403169 426 ntBASIC1.07□□□□□ -2.24
LRRC39Q96DD0 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.07□□□□□ -2.24
LRRC39Q96DD0 DYNLT3P2-201ENST00000442517 295 ntBASIC1.07□□□□□ -2.24
LRRC39Q96DD0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.07□□□□□ -2.24
LRRC39Q96DD0 AC007395.1-201ENST00000451333 677 ntBASIC1.07□□□□□ -2.24
LRRC39Q96DD0 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.07□□□□□ -2.24
LRRC39Q96DD0 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.07□□□□□ -2.24
LRRC39Q96DD0 AC010587.1-201ENST00000505809 469 ntBASIC1.07□□□□□ -2.24
LRRC39Q96DD0 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.07□□□□□ -2.24
LRRC39Q96DD0 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.07□□□□□ -2.24
LRRC39Q96DD0 AL512310.8-201ENST00000550183 120 ntBASIC1.07□□□□□ -2.24
LRRC39Q96DD0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.07□□□□□ -2.24
LRRC39Q96DD0 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.07□□□□□ -2.24
LRRC39Q96DD0 AC109446.1-201ENST00000566172 220 ntBASIC1.07□□□□□ -2.24
LRRC39Q96DD0 MIR4295-201ENST00000585286 85 ntBASIC1.07□□□□□ -2.24
LRRC39Q96DD0 AL359821.1-201ENST00000605519 182 ntBASIC1.07□□□□□ -2.24
LRRC39Q96DD0 RNU4-5P-201ENST00000607255 135 ntBASIC1.07□□□□□ -2.24
LRRC39Q96DD0 AC092140.2-201ENST00000618027 521 ntBASIC1.07□□□□□ -2.24
LRRC39Q96DD0 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
LRRC39Q96DD0 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
LRRC39Q96DD0 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.06□□□□□ -2.24
LRRC39Q96DD0 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
LRRC39Q96DD0 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
LRRC39Q96DD0 RNU1-22P-201ENST00000363334 158 ntBASIC1.06□□□□□ -2.24
LRRC39Q96DD0 SNORD31B-201ENST00000364977 69 ntBASIC1.06□□□□□ -2.24
LRRC39Q96DD0 RNU6-61P-201ENST00000365528 109 ntBASIC1.06□□□□□ -2.24
LRRC39Q96DD0 RNU6-83P-201ENST00000384568 112 ntBASIC1.06□□□□□ -2.24
LRRC39Q96DD0 RNU6-1242P-201ENST00000391052 103 ntBASIC1.06□□□□□ -2.24
LRRC39Q96DD0 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
LRRC39Q96DD0 RNU2-3P-201ENST00000410144 191 ntBASIC1.06□□□□□ -2.24
LRRC39Q96DD0 ARL5AP1-201ENST00000418991 388 ntBASIC1.06□□□□□ -2.24
LRRC39Q96DD0 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.06□□□□□ -2.24
LRRC39Q96DD0 Z82205.1-201ENST00000428456 297 ntBASIC1.06□□□□□ -2.24
LRRC39Q96DD0 MTCO3P29-201ENST00000432119 779 ntBASIC1.06□□□□□ -2.24
LRRC39Q96DD0 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.06□□□□□ -2.24
LRRC39Q96DD0 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.06□□□□□ -2.24
LRRC39Q96DD0 HMGN2P9-201ENST00000476875 229 ntBASIC1.06□□□□□ -2.24
LRRC39Q96DD0 RPS23P4-201ENST00000487908 423 ntBASIC1.06□□□□□ -2.24
LRRC39Q96DD0 AC093852.1-201ENST00000503587 266 ntBASIC1.06□□□□□ -2.24
LRRC39Q96DD0 MTCO3P28-201ENST00000513351 515 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms