Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.35□□□□□ -1.87
PTX3P26022 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.35□□□□□ -1.87
PTX3P26022 Y_RNA.772-201ENST00000606692 102 ntBASIC3.35□□□□□ -1.87
PTX3P26022 U4.6-201ENST00000621618 127 ntBASIC3.35□□□□□ -1.87
PTX3P26022 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
PTX3P26022 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PTX3P26022 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.35□□□□□ -1.87
PTX3P26022 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.35□□□□□ -1.87
PTX3P26022 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PTX3P26022 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.34□□□□□ -1.87
PTX3P26022 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PTX3P26022 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PTX3P26022 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
PTX3P26022 Y_RNA.512-201ENST00000384518 102 ntBASIC3.34□□□□□ -1.87
PTX3P26022 RNU6-159P-201ENST00000391080 106 ntBASIC3.34□□□□□ -1.87
PTX3P26022 RNA5SP354-201ENST00000391247 136 ntBASIC3.34□□□□□ -1.87
PTX3P26022 MIR1302-6-201ENST00000408466 90 ntBASIC3.34□□□□□ -1.87
PTX3P26022 RNU6-130P-201ENST00000411112 103 ntBASIC3.34□□□□□ -1.87
PTX3P26022 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.34□□□□□ -1.87
PTX3P26022 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.34□□□□□ -1.87
PTX3P26022 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.34□□□□□ -1.87
PTX3P26022 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.34□□□□□ -1.87
PTX3P26022 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.34□□□□□ -1.87
PTX3P26022 RPS15AP7-201ENST00000439294 405 ntBASIC3.34□□□□□ -1.87
PTX3P26022 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.34□□□□□ -1.87
PTX3P26022 RPL23AP67-201ENST00000465341 474 ntBASIC3.34□□□□□ -1.87
PTX3P26022 AC090525.1-201ENST00000479116 478 ntBASIC3.34□□□□□ -1.87
PTX3P26022 AC025465.3-201ENST00000510570 311 ntBASIC3.34□□□□□ -1.87
PTX3P26022 RNU6-408P-201ENST00000515910 100 ntBASIC3.34□□□□□ -1.87
PTX3P26022 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.34□□□□□ -1.87
PTX3P26022 RNU6-58P-201ENST00000517143 103 ntBASIC3.34□□□□□ -1.87
PTX3P26022 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.34□□□□□ -1.87
PTX3P26022 AC093023.1-201ENST00000547375 507 ntBASIC3.34□□□□□ -1.87
PTX3P26022 CYP4A27P-201ENST00000567218 190 ntBASIC3.34□□□□□ -1.87
PTX3P26022 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.34□□□□□ -1.87
PTX3P26022 AC062037.2-201ENST00000610137 73 ntBASIC3.34□□□□□ -1.87
PTX3P26022 SNORD98-201ENST00000636377 67 ntBASIC3.34□□□□□ -1.87
PTX3P26022 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PTX3P26022 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.34□□□□□ -1.88
PTX3P26022 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
PTX3P26022 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.34□□□□□ -1.88
PTX3P26022 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.33□□□□□ -1.88
PTX3P26022 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PTX3P26022 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTX3P26022 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PTX3P26022 Y_RNA.288-201ENST00000364854 92 ntBASIC3.33□□□□□ -1.88
PTX3P26022 SNORA5A-201ENST00000384111 134 ntBASIC3.33□□□□□ -1.88
PTX3P26022 U3.19-201ENST00000390893 196 ntBASIC3.33□□□□□ -1.88
PTX3P26022 AL133475.1-201ENST00000404414 305 ntBASIC3.33□□□□□ -1.88
PTX3P26022 RNA5SP293-201ENST00000410527 113 ntBASIC3.33□□□□□ -1.88
PTX3P26022 DBIP2-201ENST00000419076 262 ntBASIC3.33□□□□□ -1.88
PTX3P26022 AC091286.1-201ENST00000431233 461 ntBASIC3.33□□□□□ -1.88
PTX3P26022 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.33□□□□□ -1.88
PTX3P26022 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.33□□□□□ -1.88
PTX3P26022 LINC01399-202ENST00000458450 244 ntBASIC3.33□□□□□ -1.88
PTX3P26022 AC021205.2-201ENST00000480069 347 ntBASIC3.33□□□□□ -1.88
PTX3P26022 AC106707.2-201ENST00000484182 374 ntBASIC3.33□□□□□ -1.88
PTX3P26022 SNORA70.18-201ENST00000516696 98 ntBASIC3.33□□□□□ -1.88
PTX3P26022 SNORA31.16-201ENST00000516773 139 ntBASIC3.33□□□□□ -1.88
PTX3P26022 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.33□□□□□ -1.88
PTX3P26022 AL078605.1-201ENST00000603529 500 ntBASIC3.33□□□□□ -1.88
PTX3P26022 AC005520.5-201ENST00000613926 164 ntBASIC3.33□□□□□ -1.88
PTX3P26022 AC005296.1-201ENST00000616145 209 ntBASIC3.33□□□□□ -1.88
PTX3P26022 AC009093.8-201ENST00000641769 292 ntBASIC3.33□□□□□ -1.88
PTX3P26022 AL079305.1-201ENST00000623159 3008 ntBASIC3.33□□□□□ -1.88
PTX3P26022 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.33□□□□□ -1.88
PTX3P26022 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PTX3P26022 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PTX3P26022 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.32□□□□□ -1.88
PTX3P26022 RNU6-212P-201ENST00000362642 104 ntBASIC3.32□□□□□ -1.88
PTX3P26022 Y_RNA.64-201ENST00000362845 102 ntBASIC3.32□□□□□ -1.88
PTX3P26022 RNU6-280P-201ENST00000364145 104 ntBASIC3.32□□□□□ -1.88
PTX3P26022 Y_RNA.222-201ENST00000364264 102 ntBASIC3.32□□□□□ -1.88
PTX3P26022 RNU6-879P-201ENST00000364328 108 ntBASIC3.32□□□□□ -1.88
PTX3P26022 Y_RNA.396-201ENST00000383949 103 ntBASIC3.32□□□□□ -1.88
PTX3P26022 Y_RNA.461-201ENST00000384263 103 ntBASIC3.32□□□□□ -1.88
PTX3P26022 RNU6-472P-201ENST00000384299 107 ntBASIC3.32□□□□□ -1.88
PTX3P26022 MIR10B-201ENST00000385011 110 ntBASIC3.32□□□□□ -1.88
PTX3P26022 U3.26-201ENST00000391236 204 ntBASIC3.32□□□□□ -1.88
PTX3P26022 MRPL35P1-201ENST00000404272 572 ntBASIC3.32□□□□□ -1.88
PTX3P26022 RNU6-1140P-201ENST00000410517 106 ntBASIC3.32□□□□□ -1.88
PTX3P26022 TRIAP1P1-201ENST00000427062 225 ntBASIC3.32□□□□□ -1.88
PTX3P26022 CBX3P6-201ENST00000430257 527 ntBASIC3.32□□□□□ -1.88
PTX3P26022 AP000705.1-201ENST00000454567 350 ntBASIC3.32□□□□□ -1.88
PTX3P26022 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.32□□□□□ -1.88
PTX3P26022 RPS4XP2-201ENST00000458402 793 ntBASIC3.32□□□□□ -1.88
PTX3P26022 snoU13.6-201ENST00000458785 104 ntBASIC3.32□□□□□ -1.88
PTX3P26022 HMGB1P35-201ENST00000503360 598 ntBASIC3.32□□□□□ -1.88
PTX3P26022 AC110768.1-201ENST00000509222 400 ntBASIC3.32□□□□□ -1.88
PTX3P26022 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.32□□□□□ -1.88
PTX3P26022 AC104619.4-201ENST00000510773 249 ntBASIC3.32□□□□□ -1.88
PTX3P26022 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.32□□□□□ -1.88
PTX3P26022 RNU5F-2P-201ENST00000516066 82 ntBASIC3.32□□□□□ -1.88
PTX3P26022 RN7SKP49-201ENST00000516675 260 ntBASIC3.32□□□□□ -1.88
PTX3P26022 NDUFB9P3-201ENST00000521269 501 ntBASIC3.32□□□□□ -1.88
PTX3P26022 AP003733.2-201ENST00000529409 171 ntBASIC3.32□□□□□ -1.88
PTX3P26022 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.32□□□□□ -1.88
PTX3P26022 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.32□□□□□ -1.88
PTX3P26022 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.32□□□□□ -1.88
PTX3P26022 MIR3923-201ENST00000579521 83 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms