Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 SNORA16B-201ENST00000364674 135 ntBASIC2.04□□□□□ -2.08
HDAC3O15379 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
HDAC3O15379 RNU6-434P-201ENST00000384376 107 ntBASIC2.04□□□□□ -2.08
HDAC3O15379 MIR10A-201ENST00000385043 110 ntBASIC2.04□□□□□ -2.08
HDAC3O15379 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.04□□□□□ -2.08
HDAC3O15379 RNU2-40P-201ENST00000410833 196 ntBASIC2.04□□□□□ -2.08
HDAC3O15379 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.04□□□□□ -2.08
HDAC3O15379 AC092001.1-201ENST00000453012 261 ntBASIC2.04□□□□□ -2.08
HDAC3O15379 AC007547.1-201ENST00000462177 490 ntBASIC2.04□□□□□ -2.08
HDAC3O15379 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.04□□□□□ -2.08
HDAC3O15379 TRBV1-201ENST00000476502 284 ntBASIC2.04□□□□□ -2.08
HDAC3O15379 RPL7P43-201ENST00000478876 753 ntBASIC2.04□□□□□ -2.08
HDAC3O15379 MTND4P12-201ENST00000498999 1377 ntBASIC2.04□□□□□ -2.08
HDAC3O15379 AC091885.1-201ENST00000506658 268 ntBASIC2.04□□□□□ -2.08
HDAC3O15379 RPL23AP94-201ENST00000512518 302 ntBASIC2.04□□□□□ -2.08
HDAC3O15379 AC104136.1-201ENST00000512969 394 ntBASIC2.04□□□□□ -2.08
HDAC3O15379 LRRC34P2-201ENST00000514850 553 ntBASIC2.04□□□□□ -2.08
HDAC3O15379 RNU6-189P-201ENST00000516120 101 ntBASIC2.04□□□□□ -2.08
HDAC3O15379 RAB11AP2-201ENST00000545905 639 ntBASIC2.04□□□□□ -2.08
HDAC3O15379 PSMA3P-201ENST00000555485 635 ntBASIC2.04□□□□□ -2.08
HDAC3O15379 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.04□□□□□ -2.08
HDAC3O15379 MIR4742-201ENST00000581069 85 ntBASIC2.04□□□□□ -2.08
HDAC3O15379 AL109918.3-201ENST00000603072 338 ntBASIC2.04□□□□□ -2.08
HDAC3O15379 AL670379.10-201ENST00000604330 253 ntBASIC2.04□□□□□ -2.08
HDAC3O15379 AL670379.9-201ENST00000605428 253 ntBASIC2.04□□□□□ -2.08
HDAC3O15379 AC103705.1-201ENST00000619013 241 ntBASIC2.04□□□□□ -2.08
HDAC3O15379 AC010378.1-201ENST00000619270 362 ntBASIC2.04□□□□□ -2.08
HDAC3O15379 uc_338.20-201ENST00000621563 178 ntBASIC2.04□□□□□ -2.08
HDAC3O15379 AC121333.1-201ENST00000567488 2709 ntBASIC2.03□□□□□ -2.08
HDAC3O15379 RNU6-898P-201ENST00000365627 104 ntBASIC2.03□□□□□ -2.08
HDAC3O15379 RNU6-1083P-201ENST00000384022 107 ntBASIC2.03□□□□□ -2.08
HDAC3O15379 AL356432.1-201ENST00000405809 419 ntBASIC2.03□□□□□ -2.08
HDAC3O15379 RNU2-49P-201ENST00000410666 184 ntBASIC2.03□□□□□ -2.08
HDAC3O15379 NDUFS5P4-201ENST00000412983 318 ntBASIC2.03□□□□□ -2.08
HDAC3O15379 PGBD4P6-201ENST00000421501 610 ntBASIC2.03□□□□□ -2.08
HDAC3O15379 AIMP1P2-201ENST00000425294 312 ntBASIC2.03□□□□□ -2.08
HDAC3O15379 MTCO3P46-201ENST00000425787 232 ntBASIC2.03□□□□□ -2.08
HDAC3O15379 HMGB1P9-201ENST00000429856 646 ntBASIC2.03□□□□□ -2.08
HDAC3O15379 RPL7P12-201ENST00000446719 750 ntBASIC2.03□□□□□ -2.08
HDAC3O15379 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.03□□□□□ -2.08
HDAC3O15379 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.03□□□□□ -2.08
HDAC3O15379 AC046134.1-201ENST00000514454 666 ntBASIC2.03□□□□□ -2.08
HDAC3O15379 MIR892C-201ENST00000516410 77 ntBASIC2.03□□□□□ -2.08
HDAC3O15379 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.03□□□□□ -2.08
HDAC3O15379 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.03□□□□□ -2.08
HDAC3O15379 AC026464.5-201ENST00000562497 722 ntBASIC2.03□□□□□ -2.08
HDAC3O15379 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.03□□□□□ -2.08
HDAC3O15379 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.03□□□□□ -2.08
HDAC3O15379 MIR5692A1-201ENST00000580523 69 ntBASIC2.03□□□□□ -2.08
HDAC3O15379 AL355598.1-201ENST00000604169 202 ntBASIC2.03□□□□□ -2.08
HDAC3O15379 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
HDAC3O15379 U2.17-201ENST00000611454 95 ntBASIC2.03□□□□□ -2.08
HDAC3O15379 FAM157A-202ENST00000615155 405 ntBASIC2.03□□□□□ -2.08
HDAC3O15379 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
HDAC3O15379 AC138393.1-203ENST00000327086 343 ntBASIC2.02□□□□□ -2.09
HDAC3O15379 CYCSP48-201ENST00000417124 323 ntBASIC2.02□□□□□ -2.09
HDAC3O15379 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.02□□□□□ -2.09
HDAC3O15379 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.02□□□□□ -2.09
HDAC3O15379 AL627311.1-201ENST00000431514 115 ntBASIC2.02□□□□□ -2.09
HDAC3O15379 MICF-203ENST00000432679 129 ntBASIC2.02□□□□□ -2.09
HDAC3O15379 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.02□□□□□ -2.09
HDAC3O15379 RPS15AP5-201ENST00000436276 388 ntBASIC2.02□□□□□ -2.09
HDAC3O15379 IFNA20P-201ENST00000436840 528 ntBASIC2.02□□□□□ -2.09
HDAC3O15379 AC004383.1-201ENST00000438135 289 ntBASIC2.02□□□□□ -2.09
HDAC3O15379 NDUFB1P2-201ENST00000449477 176 ntBASIC2.02□□□□□ -2.09
HDAC3O15379 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.02□□□□□ -2.09
HDAC3O15379 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.02□□□□□ -2.09
HDAC3O15379 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.02□□□□□ -2.09
HDAC3O15379 snoU109.2-201ENST00000459316 135 ntBASIC2.02□□□□□ -2.09
HDAC3O15379 RNU6-329P-201ENST00000459618 107 ntBASIC2.02□□□□□ -2.09
HDAC3O15379 AC055731.1-201ENST00000474387 401 ntBASIC2.02□□□□□ -2.09
HDAC3O15379 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.02□□□□□ -2.09
HDAC3O15379 AC103851.1-201ENST00000506833 274 ntBASIC2.02□□□□□ -2.09
HDAC3O15379 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.02□□□□□ -2.09
HDAC3O15379 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.02□□□□□ -2.09
HDAC3O15379 AC008549.1-201ENST00000512900 643 ntBASIC2.02□□□□□ -2.09
HDAC3O15379 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.02□□□□□ -2.09
HDAC3O15379 SCARNA17.1-201ENST00000516211 143 ntBASIC2.02□□□□□ -2.09
HDAC3O15379 SCARNA17.2-201ENST00000516334 143 ntBASIC2.02□□□□□ -2.09
HDAC3O15379 RNU2-44P-201ENST00000516795 194 ntBASIC2.02□□□□□ -2.09
HDAC3O15379 RNU7-30P-201ENST00000516835 62 ntBASIC2.02□□□□□ -2.09
HDAC3O15379 RNU6-1088P-201ENST00000516850 104 ntBASIC2.02□□□□□ -2.09
HDAC3O15379 RNU6-273P-201ENST00000516937 96 ntBASIC2.02□□□□□ -2.09
HDAC3O15379 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.02□□□□□ -2.09
HDAC3O15379 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.02□□□□□ -2.09
HDAC3O15379 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.02□□□□□ -2.09
HDAC3O15379 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.02□□□□□ -2.09
HDAC3O15379 MIR3935-201ENST00000583472 104 ntBASIC2.02□□□□□ -2.09
HDAC3O15379 MIR5692C1-201ENST00000585309 91 ntBASIC2.02□□□□□ -2.09
HDAC3O15379 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.02□□□□□ -2.09
HDAC3O15379 AL117336.2-201ENST00000602435 335 ntBASIC2.02□□□□□ -2.09
HDAC3O15379 C8orf59P2-201ENST00000603441 271 ntBASIC2.02□□□□□ -2.09
HDAC3O15379 AL357078.3-201ENST00000607528 618 ntBASIC2.02□□□□□ -2.09
HDAC3O15379 SCARNA17.4-201ENST00000614296 143 ntBASIC2.02□□□□□ -2.09
HDAC3O15379 AC005296.1-201ENST00000616145 209 ntBASIC2.02□□□□□ -2.09
HDAC3O15379 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.02□□□□□ -2.09
HDAC3O15379 AC104985.2-201ENST00000620598 500 ntBASIC2.02□□□□□ -2.09
HDAC3O15379 AC112487.2-201ENST00000637950 304 ntBASIC2.02□□□□□ -2.09
HDAC3O15379 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.02□□□□□ -2.09
HDAC3O15379 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms