Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 INTS6P1-201ENST00000504674 2530 ntBASIC2.56□□□□□ -2
KRTAP3-1Q9BYR8 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 RNA5SP319-201ENST00000362768 119 ntBASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 RNU6-414P-201ENST00000363705 104 ntBASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 Y_RNA.219-201ENST00000364232 113 ntBASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 RNU6-438P-201ENST00000365561 103 ntBASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 RNU6-573P-201ENST00000383938 106 ntBASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 SNORD61-201ENST00000384252 73 ntBASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 AL117342.1-201ENST00000404861 406 ntBASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 Y_RNA.621-201ENST00000411065 96 ntBASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 AC016909.1-201ENST00000415916 166 ntBASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 MTATP8P2-201ENST00000435212 202 ntBASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 AC064862.4-201ENST00000442180 334 ntBASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 HMGN2P16-201ENST00000456802 261 ntBASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 AC108751.2-201ENST00000469993 231 ntBASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 RN7SL807P-201ENST00000470923 297 ntBASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 RN7SKP260-201ENST00000516907 149 ntBASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 RNU6-1096P-201ENST00000517089 102 ntBASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 AC068339.1-201ENST00000526965 141 ntBASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 AC141557.1-201ENST00000540982 400 ntBASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 AC103810.1-201ENST00000579873 453 ntBASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 AL138895.2-201ENST00000603019 178 ntBASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 MIR6889-201ENST00000613185 59 ntBASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 AC134878.1-201ENST00000619901 243 ntBASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
KRTAP3-1Q9BYR8 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 AP003122.5-201ENST00000527668 3766 ntBASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 RNU6-418P-201ENST00000384035 107 ntBASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 RNU1-77P-201ENST00000390868 162 ntBASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 Z98742.2-201ENST00000431564 187 ntBASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 RN7SL443P-201ENST00000464331 290 ntBASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 RN7SL51P-201ENST00000468230 285 ntBASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 RN7SL170P-201ENST00000487098 295 ntBASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 NDUFA4P2-201ENST00000489989 244 ntBASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 RN7SL346P-201ENST00000491561 294 ntBASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 SNORD46.2-201ENST00000516021 102 ntBASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 RNU6-240P-201ENST00000516098 97 ntBASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 RNY4P20-201ENST00000516678 93 ntBASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 RN7SKP282-201ENST00000516824 299 ntBASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 AP003730.1-201ENST00000524605 285 ntBASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 AP001880.2-201ENST00000538233 448 ntBASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 AL390726.5-202ENST00000564800 256 ntBASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 DHX9P1-201ENST00000436565 3076 ntBASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP3-1Q9BYR8 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
KRTAP3-1Q9BYR8 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
KRTAP3-1Q9BYR8 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.53□□□□□ -2
KRTAP3-1Q9BYR8 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
KRTAP3-1Q9BYR8 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
KRTAP3-1Q9BYR8 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 210.3 ms