Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 AL157398.1-201ENST00000452981 186 ntBASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 TRMT112P2-201ENST00000512910 132 ntBASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 SNORA31.2-201ENST00000516019 134 ntBASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 SNORA31.4-201ENST00000516049 129 ntBASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 DEFB108E-201ENST00000524692 240 ntBASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 AL590705.4-201ENST00000532209 134 ntBASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 AC004812.1-201ENST00000540773 146 ntBASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 AC025423.5-201ENST00000550230 219 ntBASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 AL121579.1-201ENST00000555129 305 ntBASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 AL136520.1-202ENST00000555494 763 ntBASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 AC009229.3-201ENST00000608056 282 ntBASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 AC104465.1-201ENST00000611365 139 ntBASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 AC083806.3-201ENST00000614016 455 ntBASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 MIR6715A-201ENST00000615929 79 ntBASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 AC093875.1-201ENST00000623688 504 ntBASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 SCARNA4-202ENST00000625402 129 ntBASIC0.39□□□□□ -2.35
TRAV13-1A0A0B4J241 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
TRAV13-1A0A0B4J241 MTCO1P17-201ENST00000411522 491 ntBASIC0.38□□□□□ -2.35
TRAV13-1A0A0B4J241 MTCO3P41-201ENST00000414801 328 ntBASIC0.38□□□□□ -2.35
TRAV13-1A0A0B4J241 COX6CP10-201ENST00000416832 224 ntBASIC0.38□□□□□ -2.35
TRAV13-1A0A0B4J241 ARL5AP1-201ENST00000418991 388 ntBASIC0.38□□□□□ -2.35
TRAV13-1A0A0B4J241 RAB28P5-201ENST00000427490 651 ntBASIC0.38□□□□□ -2.35
TRAV13-1A0A0B4J241 AC108059.3-201ENST00000456388 214 ntBASIC0.38□□□□□ -2.35
TRAV13-1A0A0B4J241 AL122001.1-201ENST00000457027 370 ntBASIC0.38□□□□□ -2.35
TRAV13-1A0A0B4J241 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.38□□□□□ -2.35
TRAV13-1A0A0B4J241 AL139824.2-201ENST00000458731 1095 ntBASIC0.38□□□□□ -2.35
TRAV13-1A0A0B4J241 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
TRAV13-1A0A0B4J241 RNU4-54P-201ENST00000516428 129 ntBASIC0.38□□□□□ -2.35
TRAV13-1A0A0B4J241 RNA5SP121-201ENST00000516537 101 ntBASIC0.38□□□□□ -2.35
TRAV13-1A0A0B4J241 SNORA43.2-201ENST00000516652 128 ntBASIC0.38□□□□□ -2.35
TRAV13-1A0A0B4J241 RNU6-677P-201ENST00000516914 101 ntBASIC0.38□□□□□ -2.35
TRAV13-1A0A0B4J241 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.38□□□□□ -2.35
TRAV13-1A0A0B4J241 AP003484.1-201ENST00000530974 250 ntBASIC0.38□□□□□ -2.35
TRAV13-1A0A0B4J241 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.38□□□□□ -2.35
TRAV13-1A0A0B4J241 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.38□□□□□ -2.35
TRAV13-1A0A0B4J241 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
TRAV13-1A0A0B4J241 MIR412-201ENST00000362142 91 ntBASIC0.37□□□□□ -2.35
TRAV13-1A0A0B4J241 SNORD56.1-201ENST00000362913 68 ntBASIC0.37□□□□□ -2.35
TRAV13-1A0A0B4J241 RNU5A-8P-201ENST00000364102 114 ntBASIC0.37□□□□□ -2.35
TRAV13-1A0A0B4J241 RNU6-110P-201ENST00000384508 104 ntBASIC0.37□□□□□ -2.35
TRAV13-1A0A0B4J241 SNORA12-201ENST00000391162 147 ntBASIC0.37□□□□□ -2.35
TRAV13-1A0A0B4J241 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.37□□□□□ -2.35
TRAV13-1A0A0B4J241 CETN4P-201ENST00000432407 469 ntBASIC0.37□□□□□ -2.35
TRAV13-1A0A0B4J241 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.37□□□□□ -2.35
TRAV13-1A0A0B4J241 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.37□□□□□ -2.35
TRAV13-1A0A0B4J241 AC005840.1-201ENST00000498412 377 ntBASIC0.37□□□□□ -2.35
TRAV13-1A0A0B4J241 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.37□□□□□ -2.35
TRAV13-1A0A0B4J241 MTCO3P28-201ENST00000513351 515 ntBASIC0.37□□□□□ -2.35
TRAV13-1A0A0B4J241 AC108729.3-201ENST00000513484 108 ntBASIC0.37□□□□□ -2.35
TRAV13-1A0A0B4J241 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.37□□□□□ -2.35
TRAV13-1A0A0B4J241 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.37□□□□□ -2.35
TRAV13-1A0A0B4J241 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.37□□□□□ -2.35
TRAV13-1A0A0B4J241 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC0.37□□□□□ -2.35
TRAV13-1A0A0B4J241 BNIP3P6-201ENST00000549284 499 ntBASIC0.37□□□□□ -2.35
TRAV13-1A0A0B4J241 HSPE1P4-201ENST00000550617 308 ntBASIC0.37□□□□□ -2.35
TRAV13-1A0A0B4J241 AC008015.1-201ENST00000555505 465 ntBASIC0.37□□□□□ -2.35
TRAV13-1A0A0B4J241 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.37□□□□□ -2.35
TRAV13-1A0A0B4J241 AC109446.2-201ENST00000567872 497 ntBASIC0.37□□□□□ -2.35
TRAV13-1A0A0B4J241 MIR4709-201ENST00000577272 72 ntBASIC0.37□□□□□ -2.35
TRAV13-1A0A0B4J241 AP001004.1-201ENST00000582468 324 ntBASIC0.37□□□□□ -2.35
TRAV13-1A0A0B4J241 AC105148.1-201ENST00000604961 409 ntBASIC0.37□□□□□ -2.35
TRAV13-1A0A0B4J241 AC018889.1-201ENST00000605372 397 ntBASIC0.37□□□□□ -2.35
TRAV13-1A0A0B4J241 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.37□□□□□ -2.35
TRAV13-1A0A0B4J241 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.37□□□□□ -2.35
TRAV13-1A0A0B4J241 AC078880.5-201ENST00000617845 421 ntBASIC0.37□□□□□ -2.35
TRAV13-1A0A0B4J241 MIR6767-201ENST00000637302 66 ntBASIC0.37□□□□□ -2.35
TRAV13-1A0A0B4J241 AL159152.1-201ENST00000635019 2587 ntBASIC0.37□□□□□ -2.35
TRAV13-1A0A0B4J241 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
TRAV13-1A0A0B4J241 AL391994.1-201ENST00000254724 282 ntBASIC0.36□□□□□ -2.35
TRAV13-1A0A0B4J241 SNORD18A-201ENST00000363753 72 ntBASIC0.36□□□□□ -2.35
TRAV13-1A0A0B4J241 RNU1-96P-201ENST00000364163 162 ntBASIC0.36□□□□□ -2.35
TRAV13-1A0A0B4J241 MIR10A-201ENST00000385043 110 ntBASIC0.36□□□□□ -2.35
TRAV13-1A0A0B4J241 MTCO1P21-201ENST00000416634 589 ntBASIC0.36□□□□□ -2.35
TRAV13-1A0A0B4J241 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.36□□□□□ -2.35
TRAV13-1A0A0B4J241 ELOCP9-201ENST00000418624 239 ntBASIC0.36□□□□□ -2.35
TRAV13-1A0A0B4J241 USP9YP14-201ENST00000430663 563 ntBASIC0.36□□□□□ -2.35
TRAV13-1A0A0B4J241 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.36□□□□□ -2.35
TRAV13-1A0A0B4J241 NDUFB1P2-201ENST00000449477 176 ntBASIC0.36□□□□□ -2.35
TRAV13-1A0A0B4J241 AC006026.2-201ENST00000457376 180 ntBASIC0.36□□□□□ -2.35
TRAV13-1A0A0B4J241 RPL39P38-201ENST00000467018 153 ntBASIC0.36□□□□□ -2.35
TRAV13-1A0A0B4J241 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.36□□□□□ -2.35
TRAV13-1A0A0B4J241 AC034244.1-201ENST00000507687 207 ntBASIC0.36□□□□□ -2.35
TRAV13-1A0A0B4J241 AC108078.2-201ENST00000510750 236 ntBASIC0.36□□□□□ -2.35
TRAV13-1A0A0B4J241 AC011604.1-201ENST00000545978 196 ntBASIC0.36□□□□□ -2.35
TRAV13-1A0A0B4J241 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.36□□□□□ -2.35
TRAV13-1A0A0B4J241 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.36□□□□□ -2.35
TRAV13-1A0A0B4J241 AL138889.2-201ENST00000603883 242 ntBASIC0.36□□□□□ -2.35
TRAV13-1A0A0B4J241 AL022154.1-201ENST00000604698 785 ntBASIC0.36□□□□□ -2.35
TRAV13-1A0A0B4J241 BNIP3P10-201ENST00000605360 577 ntBASIC0.36□□□□□ -2.35
TRAV13-1A0A0B4J241 AC016727.1-205ENST00000605437 569 ntBASIC0.36□□□□□ -2.35
TRAV13-1A0A0B4J241 MIR15A-201ENST00000607334 83 ntBASIC0.36□□□□□ -2.35
TRAV13-1A0A0B4J241 AC124016.2-201ENST00000610058 665 ntBASIC0.36□□□□□ -2.35
TRAV13-1A0A0B4J241 AL138955.1-201ENST00000622881 1040 ntBASIC0.36□□□□□ -2.35
TRAV13-1A0A0B4J241 RNU6-1123P-201ENST00000362347 106 ntBASIC0.35□□□□□ -2.35
TRAV13-1A0A0B4J241 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms