Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AL096840.1-201ENST00000603287 93 ntBASIC2.1□□□□□ -2.07
HDAC3O15379 CTHRC1P1-201ENST00000605383 469 ntBASIC2.1□□□□□ -2.07
HDAC3O15379 AC021646.1-201ENST00000605469 484 ntBASIC2.1□□□□□ -2.07
HDAC3O15379 MIR6132-201ENST00000622083 109 ntBASIC2.1□□□□□ -2.07
HDAC3O15379 AC005858.4-201ENST00000623191 700 ntBASIC2.1□□□□□ -2.07
HDAC3O15379 CTSLP2-204ENST00000629029 392 ntBASIC2.1□□□□□ -2.07
HDAC3O15379 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
HDAC3O15379 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
HDAC3O15379 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.09□□□□□ -2.07
HDAC3O15379 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
HDAC3O15379 U3.12-201ENST00000364498 214 ntBASIC2.09□□□□□ -2.07
HDAC3O15379 RNU6-384P-201ENST00000364900 104 ntBASIC2.09□□□□□ -2.07
HDAC3O15379 RNU6-166P-201ENST00000384371 107 ntBASIC2.09□□□□□ -2.07
HDAC3O15379 Y_RNA.500-201ENST00000384466 111 ntBASIC2.09□□□□□ -2.07
HDAC3O15379 RNU6-45P-201ENST00000384471 107 ntBASIC2.09□□□□□ -2.07
HDAC3O15379 RNA5SP338-201ENST00000410495 85 ntBASIC2.09□□□□□ -2.07
HDAC3O15379 CYCSP33-201ENST00000414485 327 ntBASIC2.09□□□□□ -2.07
HDAC3O15379 PDCL2P1-201ENST00000419302 352 ntBASIC2.09□□□□□ -2.07
HDAC3O15379 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.09□□□□□ -2.07
HDAC3O15379 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
HDAC3O15379 ERLEC1P1-201ENST00000433806 578 ntBASIC2.09□□□□□ -2.07
HDAC3O15379 SNRPEP8-201ENST00000442866 260 ntBASIC2.09□□□□□ -2.07
HDAC3O15379 MTND5P20-201ENST00000448677 143 ntBASIC2.09□□□□□ -2.07
HDAC3O15379 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.09□□□□□ -2.07
HDAC3O15379 PMCHL2-203ENST00000457791 237 ntBASIC2.09□□□□□ -2.07
HDAC3O15379 DYNLL1P5-201ENST00000467158 270 ntBASIC2.09□□□□□ -2.07
HDAC3O15379 AC083904.1-201ENST00000487828 231 ntBASIC2.09□□□□□ -2.07
HDAC3O15379 AC026801.1-201ENST00000497178 464 ntBASIC2.09□□□□□ -2.07
HDAC3O15379 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.09□□□□□ -2.07
HDAC3O15379 AC114781.4-201ENST00000513707 639 ntBASIC2.09□□□□□ -2.07
HDAC3O15379 RNU7-193P-201ENST00000516723 65 ntBASIC2.09□□□□□ -2.07
HDAC3O15379 RNU6-572P-201ENST00000516724 80 ntBASIC2.09□□□□□ -2.07
HDAC3O15379 Y_RNA.702-201ENST00000516843 96 ntBASIC2.09□□□□□ -2.07
HDAC3O15379 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.07
HDAC3O15379 BNIP3P25-201ENST00000596023 559 ntBASIC2.09□□□□□ -2.07
HDAC3O15379 AC092807.2-201ENST00000609367 243 ntBASIC2.09□□□□□ -2.07
HDAC3O15379 uc_338.11-201ENST00000619132 160 ntBASIC2.09□□□□□ -2.07
HDAC3O15379 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.09□□□□□ -2.07
HDAC3O15379 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
HDAC3O15379 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
HDAC3O15379 OR56A5-201ENST00000340110 738 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 Y_RNA.157-201ENST00000363638 102 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 SNORD14B-201ENST00000364533 90 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 RNA5SP160-201ENST00000364866 120 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 RNA5SP138-201ENST00000365098 114 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 RNU6-395P-201ENST00000365662 106 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HDAC3O15379 RNU1-73P-201ENST00000383971 164 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 SNORA32.2-201ENST00000384049 122 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 RNU6-1179P-201ENST00000384667 107 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 MIR301A-201ENST00000385261 86 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 SNORA40C-201ENST00000391285 128 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 RNU2-3P-201ENST00000410144 191 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 RNA5SP118-201ENST00000410385 109 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.08□□□□□ -2.08
HDAC3O15379 AC009963.1-201ENST00000417265 157 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.08□□□□□ -2.08
HDAC3O15379 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.08□□□□□ -2.08
HDAC3O15379 PRPS1P1-201ENST00000445305 876 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 MTND3P10-201ENST00000450967 341 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.08□□□□□ -2.08
HDAC3O15379 RPL23AP49-201ENST00000492925 468 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 AC010486.1-201ENST00000511793 424 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 AC008413.1-201ENST00000511864 177 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 RNU6-875P-201ENST00000516488 106 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 RNU6-143P-201ENST00000516942 93 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 RNU6-703P-201ENST00000516946 107 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 RNU6-1314P-201ENST00000517139 104 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 MTND4P7-201ENST00000523876 130 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HDAC3O15379 AC090115.3-201ENST00000553218 849 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 OR11H5P-201ENST00000554039 926 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 SCOCP1-201ENST00000554676 349 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 MTCO3P23-201ENST00000561363 289 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.08□□□□□ -2.08
HDAC3O15379 AC007229.1-201ENST00000590455 412 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 AL627230.6-201ENST00000611129 280 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 AC104260.1-201ENST00000616660 539 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 U6.42-201ENST00000618440 107 ntBASIC2.08□□□□□ -2.08
HDAC3O15379 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
HDAC3O15379 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
HDAC3O15379 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HDAC3O15379 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.08□□□□□ -2.08
HDAC3O15379 AC080128.1-201ENST00000474389 1917 ntBASIC2.07□□□□□ -2.08
HDAC3O15379 MIR449A-201ENST00000362113 91 ntBASIC2.07□□□□□ -2.08
HDAC3O15379 Y_RNA.373-201ENST00000365600 103 ntBASIC2.07□□□□□ -2.08
HDAC3O15379 RNU6-393P-201ENST00000384475 107 ntBASIC2.07□□□□□ -2.08
HDAC3O15379 RNU6-658P-201ENST00000384606 106 ntBASIC2.07□□□□□ -2.08
HDAC3O15379 MIR888-201ENST00000401186 77 ntBASIC2.07□□□□□ -2.08
HDAC3O15379 RNU6-373P-201ENST00000411247 98 ntBASIC2.07□□□□□ -2.08
HDAC3O15379 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.07□□□□□ -2.08
HDAC3O15379 AL353621.1-201ENST00000418219 243 ntBASIC2.07□□□□□ -2.08
HDAC3O15379 AL353729.1-201ENST00000425044 720 ntBASIC2.07□□□□□ -2.08
HDAC3O15379 AL513185.2-201ENST00000425543 193 ntBASIC2.07□□□□□ -2.08
HDAC3O15379 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.07□□□□□ -2.08
HDAC3O15379 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.07□□□□□ -2.08
HDAC3O15379 AC098614.3-201ENST00000438957 440 ntBASIC2.07□□□□□ -2.08
HDAC3O15379 RNU7-66P-201ENST00000459469 62 ntBASIC2.07□□□□□ -2.08
HDAC3O15379 RNU6-1208P-201ENST00000459588 107 ntBASIC2.07□□□□□ -2.08
HDAC3O15379 AC117503.1-201ENST00000472241 394 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 283.8 ms