Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHB9Q9Y5E1 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
PCDHB9Q9Y5E1 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
PCDHB9Q9Y5E1 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PCDHB9Q9Y5E1 RNA5SP28-201ENST00000363841 119 ntBASIC4.59□□□□□ -1.67
PCDHB9Q9Y5E1 MIR659-201ENST00000384963 97 ntBASIC4.59□□□□□ -1.67
PCDHB9Q9Y5E1 RNU6-578P-201ENST00000390980 103 ntBASIC4.59□□□□□ -1.67
PCDHB9Q9Y5E1 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.59□□□□□ -1.67
PCDHB9Q9Y5E1 AL356387.2-201ENST00000422272 243 ntBASIC4.59□□□□□ -1.67
PCDHB9Q9Y5E1 AL161651.1-201ENST00000440882 223 ntBASIC4.59□□□□□ -1.67
PCDHB9Q9Y5E1 AL591473.1-201ENST00000464297 313 ntBASIC4.59□□□□□ -1.67
PCDHB9Q9Y5E1 AC108751.2-201ENST00000469993 231 ntBASIC4.59□□□□□ -1.67
PCDHB9Q9Y5E1 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.59□□□□□ -1.67
PCDHB9Q9Y5E1 RN7SKP46-201ENST00000515942 234 ntBASIC4.59□□□□□ -1.67
PCDHB9Q9Y5E1 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
PCDHB9Q9Y5E1 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDHB9Q9Y5E1 AC021269.2-201ENST00000532318 330 ntBASIC4.59□□□□□ -1.67
PCDHB9Q9Y5E1 HIGD1AP1-201ENST00000550979 275 ntBASIC4.59□□□□□ -1.67
PCDHB9Q9Y5E1 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC4.59□□□□□ -1.67
PCDHB9Q9Y5E1 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.59□□□□□ -1.67
PCDHB9Q9Y5E1 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDHB9Q9Y5E1 AC069294.1-201ENST00000608397 350 ntBASIC4.59□□□□□ -1.67
PCDHB9Q9Y5E1 AL110115.1-201ENST00000614396 364 ntBASIC4.59□□□□□ -1.67
PCDHB9Q9Y5E1 AC013791.1-201ENST00000616619 62 ntBASIC4.59□□□□□ -1.67
PCDHB9Q9Y5E1 LINC00901.1-201ENST00000617252 152 ntBASIC4.59□□□□□ -1.67
PCDHB9Q9Y5E1 AC073308.1-201ENST00000623696 305 ntBASIC4.59□□□□□ -1.67
PCDHB9Q9Y5E1 MIR3199-2-201ENST00000636243 86 ntBASIC4.59□□□□□ -1.67
PCDHB9Q9Y5E1 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
PCDHB9Q9Y5E1 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.59□□□□□ -1.68
PCDHB9Q9Y5E1 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PCDHB9Q9Y5E1 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
PCDHB9Q9Y5E1 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
PCDHB9Q9Y5E1 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.58□□□□□ -1.68
PCDHB9Q9Y5E1 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHB9Q9Y5E1 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHB9Q9Y5E1 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDHB9Q9Y5E1 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHB9Q9Y5E1 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDHB9Q9Y5E1 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
PCDHB9Q9Y5E1 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHB9Q9Y5E1 SNORD20-201ENST00000384550 80 ntBASIC4.58□□□□□ -1.68
PCDHB9Q9Y5E1 SNORA26.5-201ENST00000391215 123 ntBASIC4.58□□□□□ -1.68
PCDHB9Q9Y5E1 SDHCP2-201ENST00000398565 501 ntBASIC4.58□□□□□ -1.68
PCDHB9Q9Y5E1 Z74021.1-201ENST00000423610 407 ntBASIC4.58□□□□□ -1.68
PCDHB9Q9Y5E1 AC108022.1-201ENST00000493466 478 ntBASIC4.58□□□□□ -1.68
PCDHB9Q9Y5E1 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHB9Q9Y5E1 IGKV2D-19-201ENST00000523346 262 ntBASIC4.58□□□□□ -1.68
PCDHB9Q9Y5E1 DEFB131C-201ENST00000528817 165 ntBASIC4.58□□□□□ -1.68
PCDHB9Q9Y5E1 AC011471.1-201ENST00000585766 187 ntBASIC4.58□□□□□ -1.68
PCDHB9Q9Y5E1 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDHB9Q9Y5E1 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDHB9Q9Y5E1 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDHB9Q9Y5E1 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHB9Q9Y5E1 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHB9Q9Y5E1 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHB9Q9Y5E1 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHB9Q9Y5E1 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHB9Q9Y5E1 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHB9Q9Y5E1 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PCDHB9Q9Y5E1 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
PCDHB9Q9Y5E1 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHB9Q9Y5E1 RNU6-899P-201ENST00000363947 107 ntBASIC4.57□□□□□ -1.68
PCDHB9Q9Y5E1 Y_RNA.273-201ENST00000364703 102 ntBASIC4.57□□□□□ -1.68
PCDHB9Q9Y5E1 SNORA84-201ENST00000459229 133 ntBASIC4.57□□□□□ -1.68
PCDHB9Q9Y5E1 RPL21P126-201ENST00000470049 478 ntBASIC4.57□□□□□ -1.68
PCDHB9Q9Y5E1 RPS4XP13-201ENST00000483219 789 ntBASIC4.57□□□□□ -1.68
PCDHB9Q9Y5E1 RNU6-107P-201ENST00000516643 102 ntBASIC4.57□□□□□ -1.68
PCDHB9Q9Y5E1 MRPL49P2-201ENST00000521066 465 ntBASIC4.57□□□□□ -1.68
PCDHB9Q9Y5E1 AC105137.2-201ENST00000569073 466 ntBASIC4.57□□□□□ -1.68
PCDHB9Q9Y5E1 AC091178.1-203ENST00000584586 279 ntBASIC4.57□□□□□ -1.68
PCDHB9Q9Y5E1 AL034555.1-201ENST00000604816 211 ntBASIC4.57□□□□□ -1.68
PCDHB9Q9Y5E1 AC068700.1-201ENST00000565862 3754 ntBASIC4.57□□□□□ -1.68
PCDHB9Q9Y5E1 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHB9Q9Y5E1 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
PCDHB9Q9Y5E1 AC004944.1-201ENST00000517807 3059 ntBASIC4.57□□□□□ -1.68
PCDHB9Q9Y5E1 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHB9Q9Y5E1 CUL1P1-201ENST00000509510 2425 ntBASIC4.57□□□□□ -1.68
PCDHB9Q9Y5E1 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHB9Q9Y5E1 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHB9Q9Y5E1 MAPK10-303ENST00000641324 3959 ntBASIC4.57□□□□□ -1.68
PCDHB9Q9Y5E1 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHB9Q9Y5E1 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHB9Q9Y5E1 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDHB9Q9Y5E1 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDHB9Q9Y5E1 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHB9Q9Y5E1 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHB9Q9Y5E1 AC010329.5-201ENST00000623497 2174 ntBASIC4.56□□□□□ -1.68
PCDHB9Q9Y5E1 SNORD115-30-201ENST00000364117 82 ntBASIC4.56□□□□□ -1.68
PCDHB9Q9Y5E1 RNU6-215P-201ENST00000365169 102 ntBASIC4.56□□□□□ -1.68
PCDHB9Q9Y5E1 RNU4-11P-201ENST00000365287 132 ntBASIC4.56□□□□□ -1.68
PCDHB9Q9Y5E1 RNA5SP167-201ENST00000365461 116 ntBASIC4.56□□□□□ -1.68
PCDHB9Q9Y5E1 SNORA1.3-201ENST00000384676 136 ntBASIC4.56□□□□□ -1.68
PCDHB9Q9Y5E1 RNA5SP201-201ENST00000410316 124 ntBASIC4.56□□□□□ -1.68
PCDHB9Q9Y5E1 RNU6-628P-201ENST00000410675 107 ntBASIC4.56□□□□□ -1.68
PCDHB9Q9Y5E1 RPL30P13-201ENST00000418873 348 ntBASIC4.56□□□□□ -1.68
PCDHB9Q9Y5E1 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHB9Q9Y5E1 MTND4LP9-201ENST00000427694 174 ntBASIC4.56□□□□□ -1.68
PCDHB9Q9Y5E1 RPS29P17-201ENST00000430795 166 ntBASIC4.56□□□□□ -1.68
PCDHB9Q9Y5E1 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PCDHB9Q9Y5E1 AC146507.2-201ENST00000460608 476 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 197.5 ms