Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AL590664.1-201ENST00000448065 339 ntBASIC3.22□□□□□ -1.89
CPEB3Q8NE35 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.22□□□□□ -1.89
CPEB3Q8NE35 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.22□□□□□ -1.89
CPEB3Q8NE35 RN7SL93P-201ENST00000463035 293 ntBASIC3.22□□□□□ -1.89
CPEB3Q8NE35 RPL23AP49-201ENST00000492925 468 ntBASIC3.22□□□□□ -1.89
CPEB3Q8NE35 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.22□□□□□ -1.89
CPEB3Q8NE35 RNU1-45P-201ENST00000517191 141 ntBASIC3.22□□□□□ -1.89
CPEB3Q8NE35 SYF2P1-201ENST00000550658 413 ntBASIC3.22□□□□□ -1.89
CPEB3Q8NE35 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.22□□□□□ -1.89
CPEB3Q8NE35 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.22□□□□□ -1.89
CPEB3Q8NE35 AC073410.2-201ENST00000603240 332 ntBASIC3.22□□□□□ -1.89
CPEB3Q8NE35 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.22□□□□□ -1.89
CPEB3Q8NE35 AP001282.2-201ENST00000616149 309 ntBASIC3.22□□□□□ -1.89
CPEB3Q8NE35 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CPEB3Q8NE35 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.22□□□□□ -1.89
CPEB3Q8NE35 AC110774.1-201ENST00000623567 2018 ntBASIC3.22□□□□□ -1.89
CPEB3Q8NE35 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
CPEB3Q8NE35 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CPEB3Q8NE35 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CPEB3Q8NE35 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CPEB3Q8NE35 SRP72P2-201ENST00000344851 1979 ntBASIC3.21□□□□□ -1.89
CPEB3Q8NE35 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
CPEB3Q8NE35 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CPEB3Q8NE35 snoU2_19.2-201ENST00000363024 80 ntBASIC3.21□□□□□ -1.9
CPEB3Q8NE35 RNU6-527P-201ENST00000363425 104 ntBASIC3.21□□□□□ -1.9
CPEB3Q8NE35 RNU4-9P-201ENST00000364951 139 ntBASIC3.21□□□□□ -1.9
CPEB3Q8NE35 MIR215-201ENST00000384858 110 ntBASIC3.21□□□□□ -1.9
CPEB3Q8NE35 SNORD115-46-201ENST00000390982 71 ntBASIC3.21□□□□□ -1.9
CPEB3Q8NE35 SNORA48.8-201ENST00000391324 134 ntBASIC3.21□□□□□ -1.9
CPEB3Q8NE35 PTMAP2-201ENST00000397627 327 ntBASIC3.21□□□□□ -1.9
CPEB3Q8NE35 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.21□□□□□ -1.9
CPEB3Q8NE35 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.21□□□□□ -1.9
CPEB3Q8NE35 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.21□□□□□ -1.9
CPEB3Q8NE35 AC243964.1-201ENST00000441814 261 ntBASIC3.21□□□□□ -1.9
CPEB3Q8NE35 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.21□□□□□ -1.9
CPEB3Q8NE35 snoU13.30-201ENST00000458951 104 ntBASIC3.21□□□□□ -1.9
CPEB3Q8NE35 TOMM22P6-201ENST00000465035 409 ntBASIC3.21□□□□□ -1.9
CPEB3Q8NE35 RPL23AP75-201ENST00000491601 451 ntBASIC3.21□□□□□ -1.9
CPEB3Q8NE35 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.21□□□□□ -1.9
CPEB3Q8NE35 MIR2355-201ENST00000517199 87 ntBASIC3.21□□□□□ -1.9
CPEB3Q8NE35 AC023632.4-201ENST00000517783 191 ntBASIC3.21□□□□□ -1.9
CPEB3Q8NE35 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.21□□□□□ -1.9
CPEB3Q8NE35 AC136932.1-201ENST00000574771 208 ntBASIC3.21□□□□□ -1.9
CPEB3Q8NE35 AC012468.1-201ENST00000604888 430 ntBASIC3.21□□□□□ -1.9
CPEB3Q8NE35 AL110115.1-201ENST00000614396 364 ntBASIC3.21□□□□□ -1.9
CPEB3Q8NE35 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CPEB3Q8NE35 AL136164.4-201ENST00000625013 2135 ntBASIC3.21□□□□□ -1.9
CPEB3Q8NE35 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.21□□□□□ -1.9
CPEB3Q8NE35 SCARNA4-201ENST00000629045 128 ntBASIC3.21□□□□□ -1.9
CPEB3Q8NE35 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CPEB3Q8NE35 AC233981.2-201ENST00000611524 1614 ntBASIC3.21□□□□□ -1.9
CPEB3Q8NE35 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CPEB3Q8NE35 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CPEB3Q8NE35 AC007256.1-201ENST00000392253 2765 ntBASIC3.21□□□□□ -1.9
CPEB3Q8NE35 AC022336.2-201ENST00000568966 2538 ntBASIC3.21□□□□□ -1.9
CPEB3Q8NE35 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.21□□□□□ -1.9
CPEB3Q8NE35 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.2□□□□□ -1.9
CPEB3Q8NE35 RNU1-18P-201ENST00000363062 164 ntBASIC3.2□□□□□ -1.9
CPEB3Q8NE35 RNU6-968P-201ENST00000384076 107 ntBASIC3.2□□□□□ -1.9
CPEB3Q8NE35 Y_RNA.478-201ENST00000384358 107 ntBASIC3.2□□□□□ -1.9
CPEB3Q8NE35 HMGN2P30-201ENST00000423237 256 ntBASIC3.2□□□□□ -1.9
CPEB3Q8NE35 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.2□□□□□ -1.9
CPEB3Q8NE35 AP000907.1-201ENST00000428428 510 ntBASIC3.2□□□□□ -1.9
CPEB3Q8NE35 RPL21P40-201ENST00000428586 483 ntBASIC3.2□□□□□ -1.9
CPEB3Q8NE35 AC091286.1-201ENST00000431233 461 ntBASIC3.2□□□□□ -1.9
CPEB3Q8NE35 HMGN2P20-201ENST00000437531 273 ntBASIC3.2□□□□□ -1.9
CPEB3Q8NE35 AC124916.1-201ENST00000444020 547 ntBASIC3.2□□□□□ -1.9
CPEB3Q8NE35 AL031659.1-201ENST00000447075 539 ntBASIC3.2□□□□□ -1.9
CPEB3Q8NE35 AL133547.1-201ENST00000448546 220 ntBASIC3.2□□□□□ -1.9
CPEB3Q8NE35 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.2□□□□□ -1.9
CPEB3Q8NE35 AC006026.2-201ENST00000457376 180 ntBASIC3.2□□□□□ -1.9
CPEB3Q8NE35 AP002884.2-201ENST00000471647 395 ntBASIC3.2□□□□□ -1.9
CPEB3Q8NE35 RN7SKP83-201ENST00000516512 178 ntBASIC3.2□□□□□ -1.9
CPEB3Q8NE35 RNU6-111P-201ENST00000517179 105 ntBASIC3.2□□□□□ -1.9
CPEB3Q8NE35 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.2□□□□□ -1.9
CPEB3Q8NE35 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.2□□□□□ -1.9
CPEB3Q8NE35 AC090617.3-201ENST00000573670 475 ntBASIC3.2□□□□□ -1.9
CPEB3Q8NE35 MIR4300-201ENST00000581016 96 ntBASIC3.2□□□□□ -1.9
CPEB3Q8NE35 AC020895.1-201ENST00000595362 272 ntBASIC3.2□□□□□ -1.9
CPEB3Q8NE35 RPL23AP88-201ENST00000605759 454 ntBASIC3.2□□□□□ -1.9
CPEB3Q8NE35 MIR6134-201ENST00000617606 109 ntBASIC3.2□□□□□ -1.9
CPEB3Q8NE35 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CPEB3Q8NE35 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.2□□□□□ -1.9
CPEB3Q8NE35 AP000553.6-201ENST00000641242 118 ntBASIC3.2□□□□□ -1.9
CPEB3Q8NE35 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CPEB3Q8NE35 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CPEB3Q8NE35 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CPEB3Q8NE35 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CPEB3Q8NE35 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CPEB3Q8NE35 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CPEB3Q8NE35 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.19□□□□□ -1.9
CPEB3Q8NE35 AC002546.1-201ENST00000588041 2504 ntBASIC3.19□□□□□ -1.9
CPEB3Q8NE35 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CPEB3Q8NE35 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CPEB3Q8NE35 RNU6-222P-201ENST00000362438 107 ntBASIC3.19□□□□□ -1.9
CPEB3Q8NE35 Y_RNA.20-201ENST00000362479 113 ntBASIC3.19□□□□□ -1.9
CPEB3Q8NE35 RNU6-884P-201ENST00000363889 107 ntBASIC3.19□□□□□ -1.9
CPEB3Q8NE35 RNU1-100P-201ENST00000365255 165 ntBASIC3.19□□□□□ -1.9
CPEB3Q8NE35 AL359837.1-201ENST00000381357 287 ntBASIC3.19□□□□□ -1.9
CPEB3Q8NE35 RNU6-1286P-201ENST00000383871 107 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms