Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 AL356575.1-201ENST00000603008 283 ntBASIC2.81□□□□□ -1.96
DDX43Q9NXZ2 AC174048.1-201ENST00000603389 144 ntBASIC2.81□□□□□ -1.96
DDX43Q9NXZ2 AC113139.1-201ENST00000605049 239 ntBASIC2.81□□□□□ -1.96
DDX43Q9NXZ2 RN7SL853P-201ENST00000617250 223 ntBASIC2.81□□□□□ -1.96
DDX43Q9NXZ2 AL160413.1-201ENST00000622780 310 ntBASIC2.81□□□□□ -1.96
DDX43Q9NXZ2 AL512643.1-201ENST00000635735 524 ntBASIC2.81□□□□□ -1.96
DDX43Q9NXZ2 Z99571.1-201ENST00000636677 394 ntBASIC2.81□□□□□ -1.96
DDX43Q9NXZ2 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
DDX43Q9NXZ2 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
DDX43Q9NXZ2 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
DDX43Q9NXZ2 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 Y_RNA.67-201ENST00000362870 100 ntBASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 RNU6-82P-201ENST00000363970 107 ntBASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 Y_RNA.339-201ENST00000365325 102 ntBASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 Y_RNA.414-201ENST00000384011 101 ntBASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 Y_RNA.530-201ENST00000384587 101 ntBASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 AL139039.1-201ENST00000401900 692 ntBASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 AL356057.2-201ENST00000403318 432 ntBASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 RNU4-46P-201ENST00000410818 138 ntBASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 RNU6-387P-201ENST00000411331 105 ntBASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 BX682237.1-201ENST00000415016 335 ntBASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 USP9YP20-201ENST00000419224 558 ntBASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 RPS15AP34-201ENST00000487776 387 ntBASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 TBCAP3-201ENST00000512475 312 ntBASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 SCARNA15.1-201ENST00000516384 125 ntBASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 MTND4P7-201ENST00000523876 130 ntBASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 AC006199.1-201ENST00000548728 219 ntBASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 POLR3GP2-201ENST00000588366 668 ntBASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 AL391813.1-201ENST00000603098 260 ntBASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 AC012409.4-201ENST00000612923 249 ntBASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 AC090574.1-201ENST00000623186 233 ntBASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 U6.114-201ENST00000636407 96 ntBASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.8□□□□□ -1.96
DDX43Q9NXZ2 Y_RNA.373-201ENST00000365600 103 ntBASIC2.79□□□□□ -1.96
DDX43Q9NXZ2 RNU6-1227P-201ENST00000383981 107 ntBASIC2.79□□□□□ -1.96
DDX43Q9NXZ2 RNU6-1083P-201ENST00000384022 107 ntBASIC2.79□□□□□ -1.96
DDX43Q9NXZ2 RNU6-190P-201ENST00000384154 102 ntBASIC2.79□□□□□ -1.96
DDX43Q9NXZ2 MIR301A-201ENST00000385261 86 ntBASIC2.79□□□□□ -1.96
DDX43Q9NXZ2 snosnR66.1-201ENST00000391095 99 ntBASIC2.79□□□□□ -1.96
DDX43Q9NXZ2 AC092809.3-201ENST00000415453 231 ntBASIC2.79□□□□□ -1.96
DDX43Q9NXZ2 RPLP0P7-201ENST00000416050 667 ntBASIC2.79□□□□□ -1.96
DDX43Q9NXZ2 ARL5AP1-201ENST00000418991 388 ntBASIC2.79□□□□□ -1.96
DDX43Q9NXZ2 AF228730.4-201ENST00000421457 183 ntBASIC2.79□□□□□ -1.96
DDX43Q9NXZ2 RPS3AP52-201ENST00000435639 297 ntBASIC2.79□□□□□ -1.96
DDX43Q9NXZ2 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.79□□□□□ -1.96
DDX43Q9NXZ2 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.79□□□□□ -1.96
DDX43Q9NXZ2 Y_RNA.632-201ENST00000459189 102 ntBASIC2.79□□□□□ -1.96
DDX43Q9NXZ2 MTND4P17-201ENST00000470444 350 ntBASIC2.79□□□□□ -1.96
DDX43Q9NXZ2 RPL7P43-201ENST00000478876 753 ntBASIC2.79□□□□□ -1.96
DDX43Q9NXZ2 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.79□□□□□ -1.96
DDX43Q9NXZ2 RNU6-1088P-201ENST00000516850 104 ntBASIC2.79□□□□□ -1.96
DDX43Q9NXZ2 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.79□□□□□ -1.96
DDX43Q9NXZ2 MTCO3P23-201ENST00000561363 289 ntBASIC2.79□□□□□ -1.96
DDX43Q9NXZ2 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.79□□□□□ -1.96
DDX43Q9NXZ2 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.79□□□□□ -1.96
DDX43Q9NXZ2 AC022432.1-201ENST00000595739 310 ntBASIC2.79□□□□□ -1.96
DDX43Q9NXZ2 AL670379.10-201ENST00000604330 253 ntBASIC2.79□□□□□ -1.96
DDX43Q9NXZ2 AL670379.9-201ENST00000605428 253 ntBASIC2.79□□□□□ -1.96
DDX43Q9NXZ2 AC022893.3-201ENST00000607665 437 ntBASIC2.79□□□□□ -1.96
DDX43Q9NXZ2 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.79□□□□□ -1.96
DDX43Q9NXZ2 Z82243.1-201ENST00000609432 473 ntBASIC2.79□□□□□ -1.96
DDX43Q9NXZ2 AC104237.2-201ENST00000612456 443 ntBASIC2.79□□□□□ -1.96
DDX43Q9NXZ2 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.79□□□□□ -1.96
DDX43Q9NXZ2 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
DDX43Q9NXZ2 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 SNORD62.1-201ENST00000362541 86 ntBASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 RNU6-1287P-201ENST00000362914 107 ntBASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 RNU6-301P-201ENST00000384277 107 ntBASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 Y_RNA.534-201ENST00000384599 112 ntBASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 RNU6-1060P-201ENST00000384664 107 ntBASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 SNORA16.2-201ENST00000390991 127 ntBASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 RNU4-14P-201ENST00000410858 122 ntBASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 HMGN2P35-201ENST00000412164 270 ntBASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 NCOR1P3-201ENST00000420479 303 ntBASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 AL669831.1-202ENST00000428504 417 ntBASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 GTF2IP13-201ENST00000438487 386 ntBASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 BRK1P2-201ENST00000442875 223 ntBASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 AL118496.2-201ENST00000448300 230 ntBASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 PPP1R2P5-201ENST00000457256 603 ntBASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 SCARNA18-201ENST00000459004 134 ntBASIC2.78□□□□□ -1.96
DDX43Q9NXZ2 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 178.4 ms