Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 MTND1P3-201ENST00000484956 952 ntBASIC1.33□□□□□ -2.2
SHANK3Q9BYB0 UBE2V1P12-201ENST00000503954 474 ntBASIC1.33□□□□□ -2.2
SHANK3Q9BYB0 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.33□□□□□ -2.2
SHANK3Q9BYB0 RNU2-19P-201ENST00000517288 84 ntBASIC1.33□□□□□ -2.2
SHANK3Q9BYB0 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.33□□□□□ -2.2
SHANK3Q9BYB0 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.33□□□□□ -2.2
SHANK3Q9BYB0 AL157871.3-201ENST00000557231 293 ntBASIC1.33□□□□□ -2.2
SHANK3Q9BYB0 MIR3126-201ENST00000577443 74 ntBASIC1.33□□□□□ -2.2
SHANK3Q9BYB0 SNORD114-21-201ENST00000606412 72 ntBASIC1.33□□□□□ -2.2
SHANK3Q9BYB0 AC022306.3-201ENST00000619930 550 ntBASIC1.33□□□□□ -2.2
SHANK3Q9BYB0 AC013470.4-201ENST00000619978 986 ntBASIC1.33□□□□□ -2.2
SHANK3Q9BYB0 U6.99-201ENST00000637524 83 ntBASIC1.33□□□□□ -2.2
SHANK3Q9BYB0 AC092104.1-201ENST00000497346 1441 ntBASIC1.33□□□□□ -2.2
SHANK3Q9BYB0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SHANK3Q9BYB0 ZNF29P-201ENST00000225587 168 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 RNU5E-1-201ENST00000362477 120 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 Y_RNA.302-201ENST00000364997 102 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 RNU6-157P-201ENST00000383957 107 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 MIR532-201ENST00000385025 91 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 RNU6-1242P-201ENST00000391052 103 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 RNU6-817P-201ENST00000391083 104 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 RNU6-757P-201ENST00000410334 100 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 RNU6-584P-201ENST00000410350 95 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 AL160275.3-201ENST00000423876 471 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 MTCO2P23-201ENST00000425216 680 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 HSFY7P-201ENST00000432672 318 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 AC010153.1-201ENST00000432862 727 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 HSFY8P-201ENST00000437934 318 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 HSFY5P-201ENST00000453726 309 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 RPL7P43-201ENST00000478876 753 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 AC116655.1-201ENST00000508324 901 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 AC009902.1-201ENST00000519351 183 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 AC011979.2-201ENST00000527568 352 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 AC090888.2-201ENST00000559765 1144 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 AL138963.2-201ENST00000605137 226 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 AL359547.2-201ENST00000615810 418 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 RNU6-931P-201ENST00000363850 107 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 SNORA4.3-201ENST00000365564 137 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 RNU6-898P-201ENST00000365627 104 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 RNU6-1200P-201ENST00000384162 107 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 RNU6-166P-201ENST00000384371 107 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 AC068050.1-201ENST00000394891 380 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 MIR1197-201ENST00000408818 88 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 AL627311.1-201ENST00000431514 115 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 RPS29P23-201ENST00000458635 123 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 AC139453.3-201ENST00000493276 369 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 AC119751.4-201ENST00000507498 357 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 AC096745.1-201ENST00000509945 370 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 RNU6-1315P-201ENST00000517187 99 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 AC026271.5-201ENST00000577873 130 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 MTCO2P2-201ENST00000591258 225 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 AL109918.3-201ENST00000603072 338 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 AL450336.1-201ENST00000605180 586 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 AC144521.1-201ENST00000607148 956 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 AL109620.1-201ENST00000618738 1197 ntBASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SHANK3Q9BYB0 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
SHANK3Q9BYB0 Y_RNA.18-201ENST00000362461 102 ntBASIC1.31□□□□□ -2.2
SHANK3Q9BYB0 MIR518D-201ENST00000385014 87 ntBASIC1.31□□□□□ -2.2
SHANK3Q9BYB0 RPS20P2-201ENST00000402520 389 ntBASIC1.31□□□□□ -2.2
SHANK3Q9BYB0 FTH1P15-201ENST00000406984 280 ntBASIC1.31□□□□□ -2.2
SHANK3Q9BYB0 RNA5SP127-201ENST00000411051 133 ntBASIC1.31□□□□□ -2.2
SHANK3Q9BYB0 RPL30P4-201ENST00000429309 333 ntBASIC1.31□□□□□ -2.2
SHANK3Q9BYB0 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.31□□□□□ -2.2
SHANK3Q9BYB0 HSPE1P23-201ENST00000509838 286 ntBASIC1.31□□□□□ -2.2
SHANK3Q9BYB0 Y_RNA.689-201ENST00000516589 107 ntBASIC1.31□□□□□ -2.2
SHANK3Q9BYB0 RNU6-1092P-201ENST00000516955 87 ntBASIC1.31□□□□□ -2.2
SHANK3Q9BYB0 ACA59.2-201ENST00000517061 156 ntBASIC1.31□□□□□ -2.2
SHANK3Q9BYB0 AC013828.2-201ENST00000532487 235 ntBASIC1.31□□□□□ -2.2
SHANK3Q9BYB0 AC022880.1-201ENST00000534017 973 ntBASIC1.31□□□□□ -2.2
SHANK3Q9BYB0 MTND1P8-201ENST00000571424 950 ntBASIC1.31□□□□□ -2.2
SHANK3Q9BYB0 AP001981.2-201ENST00000603241 418 ntBASIC1.31□□□□□ -2.2
SHANK3Q9BYB0 AC009974.1-201ENST00000608881 455 ntBASIC1.31□□□□□ -2.2
SHANK3Q9BYB0 AL355816.2-201ENST00000610049 647 ntBASIC1.31□□□□□ -2.2
SHANK3Q9BYB0 U6.42-201ENST00000618440 107 ntBASIC1.31□□□□□ -2.2
SHANK3Q9BYB0 AC138627.2-201ENST00000624202 601 ntBASIC1.31□□□□□ -2.2
SHANK3Q9BYB0 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SHANK3Q9BYB0 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
SHANK3Q9BYB0 AL391994.1-201ENST00000254724 282 ntBASIC1.3□□□□□ -2.2
SHANK3Q9BYB0 MIR218-1-201ENST00000384999 110 ntBASIC1.3□□□□□ -2.2
SHANK3Q9BYB0 MTCO2P8-201ENST00000412213 658 ntBASIC1.3□□□□□ -2.2
SHANK3Q9BYB0 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 190.6 ms