Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.41□□□□□ -1.86
PNKPQ96T60 AC018889.1-201ENST00000605372 397 ntBASIC3.41□□□□□ -1.86
PNKPQ96T60 AC073657.2-201ENST00000605661 303 ntBASIC3.41□□□□□ -1.86
PNKPQ96T60 AC006023.2-201ENST00000609916 167 ntBASIC3.41□□□□□ -1.86
PNKPQ96T60 AC090617.7-201ENST00000623952 126 ntBASIC3.41□□□□□ -1.86
PNKPQ96T60 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.41□□□□□ -1.86
PNKPQ96T60 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.41□□□□□ -1.86
PNKPQ96T60 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PNKPQ96T60 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PNKPQ96T60 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.41□□□□□ -1.86
PNKPQ96T60 AL353743.1-202ENST00000431724 1695 ntBASIC3.4□□□□□ -1.86
PNKPQ96T60 DYNLT3P1-201ENST00000378574 347 ntBASIC3.4□□□□□ -1.87
PNKPQ96T60 MIR521-1-201ENST00000384902 87 ntBASIC3.4□□□□□ -1.87
PNKPQ96T60 MIR568-201ENST00000385036 95 ntBASIC3.4□□□□□ -1.87
PNKPQ96T60 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.4□□□□□ -1.87
PNKPQ96T60 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.4□□□□□ -1.87
PNKPQ96T60 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PNKPQ96T60 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.4□□□□□ -1.87
PNKPQ96T60 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.4□□□□□ -1.87
PNKPQ96T60 RPL17P19-201ENST00000489069 552 ntBASIC3.4□□□□□ -1.87
PNKPQ96T60 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.4□□□□□ -1.87
PNKPQ96T60 RNU1-103P-201ENST00000516502 125 ntBASIC3.4□□□□□ -1.87
PNKPQ96T60 RNU6-703P-201ENST00000516946 107 ntBASIC3.4□□□□□ -1.87
PNKPQ96T60 AC023442.1-201ENST00000531247 422 ntBASIC3.4□□□□□ -1.87
PNKPQ96T60 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.4□□□□□ -1.87
PNKPQ96T60 HIGD1AP1-201ENST00000550979 275 ntBASIC3.4□□□□□ -1.87
PNKPQ96T60 AL117187.1-201ENST00000555482 181 ntBASIC3.4□□□□□ -1.87
PNKPQ96T60 CYCSP39-201ENST00000565821 309 ntBASIC3.4□□□□□ -1.87
PNKPQ96T60 ZNF192P1-203ENST00000565888 810 ntBASIC3.4□□□□□ -1.87
PNKPQ96T60 AL158827.2-201ENST00000602494 330 ntBASIC3.4□□□□□ -1.87
PNKPQ96T60 AC104695.3-201ENST00000604052 296 ntBASIC3.4□□□□□ -1.87
PNKPQ96T60 AC099778.2-201ENST00000610904 211 ntBASIC3.4□□□□□ -1.87
PNKPQ96T60 AL691447.3-201ENST00000635020 330 ntBASIC3.4□□□□□ -1.87
PNKPQ96T60 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PNKPQ96T60 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PNKPQ96T60 AC091812.1-201ENST00000432235 1948 ntBASIC3.4□□□□□ -1.87
PNKPQ96T60 AC005592.1-201ENST00000566527 1640 ntBASIC3.4□□□□□ -1.87
PNKPQ96T60 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PNKPQ96T60 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PNKPQ96T60 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.87
PNKPQ96T60 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
PNKPQ96T60 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PNKPQ96T60 AC118273.1-201ENST00000525324 3006 ntBASIC3.39□□□□□ -1.87
PNKPQ96T60 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
PNKPQ96T60 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.39□□□□□ -1.87
PNKPQ96T60 RNU1-115P-201ENST00000365329 160 ntBASIC3.39□□□□□ -1.87
PNKPQ96T60 Z98749.2-208ENST00000381646 500 ntBASIC3.39□□□□□ -1.87
PNKPQ96T60 RNU6-463P-201ENST00000384340 107 ntBASIC3.39□□□□□ -1.87
PNKPQ96T60 Y_RNA.533-201ENST00000384596 114 ntBASIC3.39□□□□□ -1.87
PNKPQ96T60 RNU6-658P-201ENST00000384606 106 ntBASIC3.39□□□□□ -1.87
PNKPQ96T60 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.39□□□□□ -1.87
PNKPQ96T60 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.39□□□□□ -1.87
PNKPQ96T60 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.39□□□□□ -1.87
PNKPQ96T60 HIGD1AP2-201ENST00000446367 280 ntBASIC3.39□□□□□ -1.87
PNKPQ96T60 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.39□□□□□ -1.87
PNKPQ96T60 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.39□□□□□ -1.87
PNKPQ96T60 RNU4-77P-201ENST00000516692 156 ntBASIC3.39□□□□□ -1.87
PNKPQ96T60 RNU6-1183P-201ENST00000517054 60 ntBASIC3.39□□□□□ -1.87
PNKPQ96T60 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.39□□□□□ -1.87
PNKPQ96T60 MIR4782-201ENST00000577987 79 ntBASIC3.39□□□□□ -1.87
PNKPQ96T60 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.39□□□□□ -1.87
PNKPQ96T60 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.39□□□□□ -1.87
PNKPQ96T60 SNORD58B-201ENST00000607313 66 ntBASIC3.39□□□□□ -1.87
PNKPQ96T60 AC004852.3-201ENST00000614131 326 ntBASIC3.39□□□□□ -1.87
PNKPQ96T60 AL110115.1-201ENST00000614396 364 ntBASIC3.39□□□□□ -1.87
PNKPQ96T60 AL162274.2-201ENST00000614406 332 ntBASIC3.39□□□□□ -1.87
PNKPQ96T60 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.39□□□□□ -1.87
PNKPQ96T60 7SK.10-201ENST00000621414 298 ntBASIC3.39□□□□□ -1.87
PNKPQ96T60 AC027309.3-201ENST00000623419 351 ntBASIC3.39□□□□□ -1.87
PNKPQ96T60 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.39□□□□□ -1.87
PNKPQ96T60 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.39□□□□□ -1.87
PNKPQ96T60 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
PNKPQ96T60 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.39□□□□□ -1.87
PNKPQ96T60 RNY1P16-201ENST00000363063 111 ntBASIC3.38□□□□□ -1.87
PNKPQ96T60 Y_RNA.314-201ENST00000365114 102 ntBASIC3.38□□□□□ -1.87
PNKPQ96T60 RNU5E-7P-201ENST00000365290 117 ntBASIC3.38□□□□□ -1.87
PNKPQ96T60 RNU6-26P-201ENST00000383985 107 ntBASIC3.38□□□□□ -1.87
PNKPQ96T60 RNU6-72P-201ENST00000384285 79 ntBASIC3.38□□□□□ -1.87
PNKPQ96T60 Y_RNA.557-201ENST00000384680 107 ntBASIC3.38□□□□□ -1.87
PNKPQ96T60 MIR548F4-201ENST00000408515 105 ntBASIC3.38□□□□□ -1.87
PNKPQ96T60 RNU2-23P-201ENST00000410545 195 ntBASIC3.38□□□□□ -1.87
PNKPQ96T60 NUP35P1-201ENST00000422734 947 ntBASIC3.38□□□□□ -1.87
PNKPQ96T60 MTND3P9-201ENST00000429526 346 ntBASIC3.38□□□□□ -1.87
PNKPQ96T60 AC099799.1-201ENST00000439809 192 ntBASIC3.38□□□□□ -1.87
PNKPQ96T60 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.38□□□□□ -1.87
PNKPQ96T60 RPS12P18-201ENST00000442381 270 ntBASIC3.38□□□□□ -1.87
PNKPQ96T60 AC013470.1-201ENST00000453438 462 ntBASIC3.38□□□□□ -1.87
PNKPQ96T60 AL353752.1-201ENST00000454946 260 ntBASIC3.38□□□□□ -1.87
PNKPQ96T60 U8.21-201ENST00000459536 136 ntBASIC3.38□□□□□ -1.87
PNKPQ96T60 AC128713.1-201ENST00000471495 306 ntBASIC3.38□□□□□ -1.87
PNKPQ96T60 AC109925.1-201ENST00000478069 331 ntBASIC3.38□□□□□ -1.87
PNKPQ96T60 AC015911.1-201ENST00000495111 156 ntBASIC3.38□□□□□ -1.87
PNKPQ96T60 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.38□□□□□ -1.87
PNKPQ96T60 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.38□□□□□ -1.87
PNKPQ96T60 AC116655.1-201ENST00000508324 901 ntBASIC3.38□□□□□ -1.87
PNKPQ96T60 RNA5SP385-201ENST00000515947 110 ntBASIC3.38□□□□□ -1.87
PNKPQ96T60 RNU6-377P-201ENST00000515965 102 ntBASIC3.38□□□□□ -1.87
PNKPQ96T60 AC109479.2-201ENST00000517842 174 ntBASIC3.38□□□□□ -1.87
PNKPQ96T60 AP005902.1-201ENST00000521358 186 ntBASIC3.38□□□□□ -1.87
PNKPQ96T60 COX6CP5-201ENST00000527162 228 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 187.7 ms