Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 RPL21P16-201ENST00000495531 483 ntBASIC3.25□□□□□ -1.89
CPEB3Q8NE35 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.25□□□□□ -1.89
CPEB3Q8NE35 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.25□□□□□ -1.89
CPEB3Q8NE35 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.25□□□□□ -1.89
CPEB3Q8NE35 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.25□□□□□ -1.89
CPEB3Q8NE35 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.25□□□□□ -1.89
CPEB3Q8NE35 AC007375.1-201ENST00000554513 578 ntBASIC3.25□□□□□ -1.89
CPEB3Q8NE35 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.25□□□□□ -1.89
CPEB3Q8NE35 LINC00933-203ENST00000559812 219 ntBASIC3.25□□□□□ -1.89
CPEB3Q8NE35 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.25□□□□□ -1.89
CPEB3Q8NE35 AC024153.1-201ENST00000603103 365 ntBASIC3.25□□□□□ -1.89
CPEB3Q8NE35 RNU1-30P-201ENST00000606575 163 ntBASIC3.25□□□□□ -1.89
CPEB3Q8NE35 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.25□□□□□ -1.89
CPEB3Q8NE35 AC099778.2-201ENST00000610904 211 ntBASIC3.25□□□□□ -1.89
CPEB3Q8NE35 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.25□□□□□ -1.89
CPEB3Q8NE35 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.25□□□□□ -1.89
CPEB3Q8NE35 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.25□□□□□ -1.89
CPEB3Q8NE35 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CPEB3Q8NE35 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.24□□□□□ -1.89
CPEB3Q8NE35 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.24□□□□□ -1.89
CPEB3Q8NE35 SNORA20.1-201ENST00000364790 130 ntBASIC3.24□□□□□ -1.89
CPEB3Q8NE35 U3.13-201ENST00000364804 214 ntBASIC3.24□□□□□ -1.89
CPEB3Q8NE35 RNU6-898P-201ENST00000365627 104 ntBASIC3.24□□□□□ -1.89
CPEB3Q8NE35 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CPEB3Q8NE35 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CPEB3Q8NE35 BTF3L4P2-201ENST00000392798 346 ntBASIC3.24□□□□□ -1.89
CPEB3Q8NE35 RNU2-64P-201ENST00000411315 191 ntBASIC3.24□□□□□ -1.89
CPEB3Q8NE35 CYCSP19-201ENST00000411715 316 ntBASIC3.24□□□□□ -1.89
CPEB3Q8NE35 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.24□□□□□ -1.89
CPEB3Q8NE35 AL358453.1-201ENST00000422522 250 ntBASIC3.24□□□□□ -1.89
CPEB3Q8NE35 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.24□□□□□ -1.89
CPEB3Q8NE35 AL513124.1-201ENST00000450410 614 ntBASIC3.24□□□□□ -1.89
CPEB3Q8NE35 PHBP14-201ENST00000512887 367 ntBASIC3.24□□□□□ -1.89
CPEB3Q8NE35 RNU7-175P-201ENST00000515915 61 ntBASIC3.24□□□□□ -1.89
CPEB3Q8NE35 RN7SKP209-201ENST00000516888 304 ntBASIC3.24□□□□□ -1.89
CPEB3Q8NE35 Y_RNA.706-201ENST00000516933 99 ntBASIC3.24□□□□□ -1.89
CPEB3Q8NE35 AP004607.1-201ENST00000524456 203 ntBASIC3.24□□□□□ -1.89
CPEB3Q8NE35 AC010186.2-204ENST00000537668 439 ntBASIC3.24□□□□□ -1.89
CPEB3Q8NE35 AP002770.2-201ENST00000543613 532 ntBASIC3.24□□□□□ -1.89
CPEB3Q8NE35 MIR5187-201ENST00000583479 76 ntBASIC3.24□□□□□ -1.89
CPEB3Q8NE35 AC010928.2-201ENST00000588017 287 ntBASIC3.24□□□□□ -1.89
CPEB3Q8NE35 AC012433.1-201ENST00000588916 398 ntBASIC3.24□□□□□ -1.89
CPEB3Q8NE35 AL355877.2-201ENST00000603670 358 ntBASIC3.24□□□□□ -1.89
CPEB3Q8NE35 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CPEB3Q8NE35 U6.92-201ENST00000636464 89 ntBASIC3.24□□□□□ -1.89
CPEB3Q8NE35 AC241585.2-209ENST00000638217 143 ntBASIC3.24□□□□□ -1.89
CPEB3Q8NE35 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CPEB3Q8NE35 MTND5P6-201ENST00000422338 1798 ntBASIC3.24□□□□□ -1.89
CPEB3Q8NE35 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CPEB3Q8NE35 AC006504.1-201ENST00000562493 3666 ntBASIC3.24□□□□□ -1.89
CPEB3Q8NE35 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CPEB3Q8NE35 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.24□□□□□ -1.89
CPEB3Q8NE35 AC007496.3-201ENST00000624987 3443 ntBASIC3.23□□□□□ -1.89
CPEB3Q8NE35 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CPEB3Q8NE35 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.23□□□□□ -1.89
CPEB3Q8NE35 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CPEB3Q8NE35 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
CPEB3Q8NE35 RNU6-212P-201ENST00000362642 104 ntBASIC3.23□□□□□ -1.89
CPEB3Q8NE35 Y_RNA.84-201ENST00000363011 104 ntBASIC3.23□□□□□ -1.89
CPEB3Q8NE35 RNY3P4-201ENST00000384428 101 ntBASIC3.23□□□□□ -1.89
CPEB3Q8NE35 U8.11-201ENST00000384699 133 ntBASIC3.23□□□□□ -1.89
CPEB3Q8NE35 U8.12-201ENST00000384701 133 ntBASIC3.23□□□□□ -1.89
CPEB3Q8NE35 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CPEB3Q8NE35 MIR548I3-201ENST00000408378 149 ntBASIC3.23□□□□□ -1.89
CPEB3Q8NE35 MIR548I1-201ENST00000408810 149 ntBASIC3.23□□□□□ -1.89
CPEB3Q8NE35 RNU2-25P-201ENST00000411041 191 ntBASIC3.23□□□□□ -1.89
CPEB3Q8NE35 RPL26P27-201ENST00000414397 437 ntBASIC3.23□□□□□ -1.89
CPEB3Q8NE35 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.23□□□□□ -1.89
CPEB3Q8NE35 YPEL5P1-201ENST00000419731 367 ntBASIC3.23□□□□□ -1.89
CPEB3Q8NE35 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.23□□□□□ -1.89
CPEB3Q8NE35 SDAD1P3-201ENST00000427380 333 ntBASIC3.23□□□□□ -1.89
CPEB3Q8NE35 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.23□□□□□ -1.89
CPEB3Q8NE35 NDUFB1P1-201ENST00000435191 180 ntBASIC3.23□□□□□ -1.89
CPEB3Q8NE35 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CPEB3Q8NE35 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.23□□□□□ -1.89
CPEB3Q8NE35 CYCSP32-201ENST00000440548 321 ntBASIC3.23□□□□□ -1.89
CPEB3Q8NE35 HMGN2P16-201ENST00000456802 261 ntBASIC3.23□□□□□ -1.89
CPEB3Q8NE35 U8.18-201ENST00000459285 133 ntBASIC3.23□□□□□ -1.89
CPEB3Q8NE35 RNU7-87P-201ENST00000459343 62 ntBASIC3.23□□□□□ -1.89
CPEB3Q8NE35 ANXA2P1-201ENST00000505539 926 ntBASIC3.23□□□□□ -1.89
CPEB3Q8NE35 Y_RNA.673-201ENST00000516306 88 ntBASIC3.23□□□□□ -1.89
CPEB3Q8NE35 AC091144.1-201ENST00000519573 138 ntBASIC3.23□□□□□ -1.89
CPEB3Q8NE35 MRPS36P4-201ENST00000534436 298 ntBASIC3.23□□□□□ -1.89
CPEB3Q8NE35 AC008011.1-201ENST00000545989 227 ntBASIC3.23□□□□□ -1.89
CPEB3Q8NE35 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.23□□□□□ -1.89
CPEB3Q8NE35 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.23□□□□□ -1.89
CPEB3Q8NE35 AC097372.5-201ENST00000623665 376 ntBASIC3.23□□□□□ -1.89
CPEB3Q8NE35 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.23□□□□□ -1.89
CPEB3Q8NE35 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CPEB3Q8NE35 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.22□□□□□ -1.89
CPEB3Q8NE35 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.22□□□□□ -1.89
CPEB3Q8NE35 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CPEB3Q8NE35 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.22□□□□□ -1.89
CPEB3Q8NE35 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CPEB3Q8NE35 AC009541.1-201ENST00000438279 2662 ntBASIC3.22□□□□□ -1.89
CPEB3Q8NE35 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CPEB3Q8NE35 RNU1-73P-201ENST00000383971 164 ntBASIC3.22□□□□□ -1.89
CPEB3Q8NE35 MIR200C-201ENST00000384980 68 ntBASIC3.22□□□□□ -1.89
CPEB3Q8NE35 RNU6-1203P-201ENST00000410703 110 ntBASIC3.22□□□□□ -1.89
CPEB3Q8NE35 BX679664.1-201ENST00000434429 253 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 215.7 ms