Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.5□□□□□ -2.01
LYSMD4Q5XG99 LRRC37A5P-203ENST00000580181 585 ntBASIC2.5□□□□□ -2.01
LYSMD4Q5XG99 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.5□□□□□ -2.01
LYSMD4Q5XG99 AC092747.3-201ENST00000603769 301 ntBASIC2.5□□□□□ -2.01
LYSMD4Q5XG99 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
LYSMD4Q5XG99 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.5□□□□□ -2.01
LYSMD4Q5XG99 AL031601.2-202ENST00000622650 282 ntBASIC2.5□□□□□ -2.01
LYSMD4Q5XG99 AC093831.2-201ENST00000624393 3427 ntBASIC2.5□□□□□ -2.01
LYSMD4Q5XG99 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 CASC19-280ENST00000642102 1351 ntBASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 AC080100.1-201ENST00000624239 5356 ntBASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 RNU6-1252P-201ENST00000363054 104 ntBASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 Y_RNA.303-201ENST00000364998 94 ntBASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 RNU6-748P-201ENST00000384648 107 ntBASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 FTH1P15-201ENST00000406984 280 ntBASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 RNU6-1328P-201ENST00000410938 106 ntBASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 RPL19P1-201ENST00000411635 428 ntBASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 SNRPEP10-201ENST00000420249 274 ntBASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 SRIP2-201ENST00000428470 166 ntBASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 ERLEC1P1-201ENST00000433806 578 ntBASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 AL441985.1-201ENST00000457727 251 ntBASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 HMGN2P26-201ENST00000463169 339 ntBASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 AC117503.1-201ENST00000472241 394 ntBASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 RPL23AP45-201ENST00000476406 468 ntBASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 AC116353.2-201ENST00000505332 712 ntBASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 AC234781.5-201ENST00000508429 271 ntBASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 Y_RNA.687-201ENST00000516558 91 ntBASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 RPPH1-2P-201ENST00000516688 293 ntBASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 BTF3P12-201ENST00000519620 469 ntBASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 AP001094.1-201ENST00000579805 193 ntBASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 VN1R80P-201ENST00000597126 338 ntBASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 AL121757.2-201ENST00000611223 313 ntBASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 AC022418.1-201ENST00000624118 445 ntBASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LYSMD4Q5XG99 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LYSMD4Q5XG99 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LYSMD4Q5XG99 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
LYSMD4Q5XG99 RNU6-876P-201ENST00000391295 104 ntBASIC2.48□□□□□ -2.01
LYSMD4Q5XG99 AL356776.1-201ENST00000406574 447 ntBASIC2.48□□□□□ -2.01
LYSMD4Q5XG99 POLHP1-201ENST00000411806 470 ntBASIC2.48□□□□□ -2.01
LYSMD4Q5XG99 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.48□□□□□ -2.01
LYSMD4Q5XG99 AC004383.1-201ENST00000438135 289 ntBASIC2.48□□□□□ -2.01
LYSMD4Q5XG99 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.48□□□□□ -2.01
LYSMD4Q5XG99 CALM1P1-201ENST00000442082 433 ntBASIC2.48□□□□□ -2.01
LYSMD4Q5XG99 MRPL42P6-201ENST00000486397 371 ntBASIC2.48□□□□□ -2.01
LYSMD4Q5XG99 AC018710.1-201ENST00000506509 158 ntBASIC2.48□□□□□ -2.01
LYSMD4Q5XG99 AP004607.1-201ENST00000524456 203 ntBASIC2.48□□□□□ -2.01
LYSMD4Q5XG99 AF235103.2-201ENST00000525753 346 ntBASIC2.48□□□□□ -2.01
LYSMD4Q5XG99 AC090115.3-201ENST00000553218 849 ntBASIC2.48□□□□□ -2.01
LYSMD4Q5XG99 BNIP3P25-201ENST00000596023 559 ntBASIC2.48□□□□□ -2.01
LYSMD4Q5XG99 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.48□□□□□ -2.01
LYSMD4Q5XG99 AC123912.5-201ENST00000605470 343 ntBASIC2.48□□□□□ -2.01
LYSMD4Q5XG99 uc_338.14-201ENST00000613162 166 ntBASIC2.48□□□□□ -2.01
LYSMD4Q5XG99 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.48□□□□□ -2.01
LYSMD4Q5XG99 SCARNA4-202ENST00000625402 129 ntBASIC2.48□□□□□ -2.01
LYSMD4Q5XG99 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.48□□□□□ -2.01
LYSMD4Q5XG99 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LYSMD4Q5XG99 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LYSMD4Q5XG99 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
LYSMD4Q5XG99 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LYSMD4Q5XG99 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
LYSMD4Q5XG99 AC138393.1-203ENST00000327086 343 ntBASIC2.47□□□□□ -2.01
LYSMD4Q5XG99 RNU6-858P-201ENST00000362436 107 ntBASIC2.47□□□□□ -2.01
LYSMD4Q5XG99 RNU1-109P-201ENST00000383960 147 ntBASIC2.47□□□□□ -2.01
LYSMD4Q5XG99 MT-TL1-201ENST00000386347 75 ntBASIC2.47□□□□□ -2.01
LYSMD4Q5XG99 AL359511.1-201ENST00000402970 211 ntBASIC2.47□□□□□ -2.01
LYSMD4Q5XG99 AL162578.1-201ENST00000406202 378 ntBASIC2.47□□□□□ -2.01
LYSMD4Q5XG99 RAP1BP3-201ENST00000407180 549 ntBASIC2.47□□□□□ -2.01
LYSMD4Q5XG99 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.47□□□□□ -2.01
LYSMD4Q5XG99 RNA5SP344-201ENST00000411081 104 ntBASIC2.47□□□□□ -2.01
LYSMD4Q5XG99 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.47□□□□□ -2.01
LYSMD4Q5XG99 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.47□□□□□ -2.01
LYSMD4Q5XG99 DPH3P2-201ENST00000422618 250 ntBASIC2.47□□□□□ -2.01
LYSMD4Q5XG99 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.47□□□□□ -2.01
LYSMD4Q5XG99 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.47□□□□□ -2.01
LYSMD4Q5XG99 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.47□□□□□ -2.01
LYSMD4Q5XG99 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.47□□□□□ -2.01
LYSMD4Q5XG99 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.47□□□□□ -2.01
LYSMD4Q5XG99 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.47□□□□□ -2.01
LYSMD4Q5XG99 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.47□□□□□ -2.01
LYSMD4Q5XG99 snoU13.23-201ENST00000458863 104 ntBASIC2.47□□□□□ -2.01
LYSMD4Q5XG99 RNU6-1208P-201ENST00000459588 107 ntBASIC2.47□□□□□ -2.01
LYSMD4Q5XG99 AP001324.2-201ENST00000461163 319 ntBASIC2.47□□□□□ -2.01
LYSMD4Q5XG99 RPL23AP11-201ENST00000475260 469 ntBASIC2.47□□□□□ -2.01
LYSMD4Q5XG99 MTCO2P30-201ENST00000503662 364 ntBASIC2.47□□□□□ -2.01
LYSMD4Q5XG99 SNORA25.17-201ENST00000517184 124 ntBASIC2.47□□□□□ -2.01
LYSMD4Q5XG99 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.47□□□□□ -2.01
LYSMD4Q5XG99 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.47□□□□□ -2.01
LYSMD4Q5XG99 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 489 ms