Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 RN7SKP21-201ENST00000516503 220 ntBASIC3.54□□□□□ -1.84
PTX3P26022 Y_RNA.706-201ENST00000516933 99 ntBASIC3.54□□□□□ -1.84
PTX3P26022 ACA59.2-201ENST00000517061 156 ntBASIC3.54□□□□□ -1.84
PTX3P26022 Y_RNA.715-201ENST00000517082 110 ntBASIC3.54□□□□□ -1.84
PTX3P26022 COX6CP5-201ENST00000527162 228 ntBASIC3.54□□□□□ -1.84
PTX3P26022 MIR5685-201ENST00000579080 79 ntBASIC3.54□□□□□ -1.84
PTX3P26022 MIR3671-201ENST00000580455 88 ntBASIC3.54□□□□□ -1.84
PTX3P26022 MIR4503-201ENST00000582187 83 ntBASIC3.54□□□□□ -1.84
PTX3P26022 MIR4697-201ENST00000582977 78 ntBASIC3.54□□□□□ -1.84
PTX3P26022 KLKP1-201ENST00000595979 403 ntBASIC3.54□□□□□ -1.84
PTX3P26022 AC068724.3-201ENST00000625906 87 ntBASIC3.54□□□□□ -1.84
PTX3P26022 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.54□□□□□ -1.84
PTX3P26022 SCARNA4-201ENST00000629045 128 ntBASIC3.54□□□□□ -1.84
PTX3P26022 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTX3P26022 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTX3P26022 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.53□□□□□ -1.84
PTX3P26022 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PTX3P26022 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
PTX3P26022 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PTX3P26022 Y_RNA.106-201ENST00000363189 100 ntBASIC3.53□□□□□ -1.84
PTX3P26022 RNU4-50P-201ENST00000364361 141 ntBASIC3.53□□□□□ -1.84
PTX3P26022 SNORD32A-201ENST00000364805 84 ntBASIC3.53□□□□□ -1.84
PTX3P26022 RNU6-1286P-201ENST00000383871 107 ntBASIC3.53□□□□□ -1.84
PTX3P26022 RNU6-142P-201ENST00000384019 107 ntBASIC3.53□□□□□ -1.84
PTX3P26022 RNU6-968P-201ENST00000384076 107 ntBASIC3.53□□□□□ -1.84
PTX3P26022 MIR628-201ENST00000385229 95 ntBASIC3.53□□□□□ -1.84
PTX3P26022 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.53□□□□□ -1.84
PTX3P26022 Y_RNA.592-201ENST00000410274 109 ntBASIC3.53□□□□□ -1.84
PTX3P26022 RN7SKP156-201ENST00000410308 342 ntBASIC3.53□□□□□ -1.84
PTX3P26022 RNA5SP44-201ENST00000410446 133 ntBASIC3.53□□□□□ -1.84
PTX3P26022 SNORA57.3-201ENST00000411095 141 ntBASIC3.53□□□□□ -1.84
PTX3P26022 RPS29P31-201ENST00000446147 164 ntBASIC3.53□□□□□ -1.84
PTX3P26022 MTCO3P8-201ENST00000453691 755 ntBASIC3.53□□□□□ -1.84
PTX3P26022 AL133162.1-201ENST00000463228 453 ntBASIC3.53□□□□□ -1.84
PTX3P26022 AC110794.1-201ENST00000505816 425 ntBASIC3.53□□□□□ -1.84
PTX3P26022 MIR2355-201ENST00000517199 87 ntBASIC3.53□□□□□ -1.84
PTX3P26022 AC093331.1-201ENST00000521474 169 ntBASIC3.53□□□□□ -1.84
PTX3P26022 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.53□□□□□ -1.84
PTX3P26022 MIR3160-1-201ENST00000577972 85 ntBASIC3.53□□□□□ -1.84
PTX3P26022 AC087499.8-201ENST00000578406 226 ntBASIC3.53□□□□□ -1.84
PTX3P26022 RN7SL703P-201ENST00000578485 302 ntBASIC3.53□□□□□ -1.84
PTX3P26022 RPL23AP78-201ENST00000599928 470 ntBASIC3.53□□□□□ -1.84
PTX3P26022 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.53□□□□□ -1.84
PTX3P26022 RNU1-30P-201ENST00000606575 163 ntBASIC3.53□□□□□ -1.84
PTX3P26022 AC007792.1-201ENST00000623023 402 ntBASIC3.53□□□□□ -1.84
PTX3P26022 AP000553.6-201ENST00000641242 118 ntBASIC3.53□□□□□ -1.84
PTX3P26022 AC004944.1-201ENST00000517807 3059 ntBASIC3.53□□□□□ -1.84
PTX3P26022 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PTX3P26022 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.53□□□□□ -1.85
PTX3P26022 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
PTX3P26022 AC233263.6-201ENST00000631132 1963 ntBASIC3.52□□□□□ -1.85
PTX3P26022 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PTX3P26022 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.52□□□□□ -1.85
PTX3P26022 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.52□□□□□ -1.85
PTX3P26022 AC091152.2-201ENST00000591628 2569 ntBASIC3.52□□□□□ -1.85
PTX3P26022 RNY3P11-201ENST00000364153 102 ntBASIC3.52□□□□□ -1.85
PTX3P26022 RNU6-1141P-201ENST00000364520 107 ntBASIC3.52□□□□□ -1.85
PTX3P26022 RNU6-450P-201ENST00000364654 107 ntBASIC3.52□□□□□ -1.85
PTX3P26022 Y_RNA.401-201ENST00000383965 117 ntBASIC3.52□□□□□ -1.85
PTX3P26022 Y_RNA.405-201ENST00000383979 100 ntBASIC3.52□□□□□ -1.85
PTX3P26022 Y_RNA.451-201ENST00000384200 100 ntBASIC3.52□□□□□ -1.85
PTX3P26022 Y_RNA.524-201ENST00000384564 100 ntBASIC3.52□□□□□ -1.85
PTX3P26022 Y_RNA.551-201ENST00000384661 102 ntBASIC3.52□□□□□ -1.85
PTX3P26022 Y_RNA.561-201ENST00000384694 100 ntBASIC3.52□□□□□ -1.85
PTX3P26022 Y_RNA.574-201ENST00000384766 95 ntBASIC3.52□□□□□ -1.85
PTX3P26022 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PTX3P26022 AL358453.1-201ENST00000422522 250 ntBASIC3.52□□□□□ -1.85
PTX3P26022 AP000907.1-201ENST00000428428 510 ntBASIC3.52□□□□□ -1.85
PTX3P26022 NDUFB1P1-201ENST00000435191 180 ntBASIC3.52□□□□□ -1.85
PTX3P26022 RPS15AP5-201ENST00000436276 388 ntBASIC3.52□□□□□ -1.85
PTX3P26022 RPS29P7-201ENST00000439662 171 ntBASIC3.52□□□□□ -1.85
PTX3P26022 AC073910.1-201ENST00000445047 438 ntBASIC3.52□□□□□ -1.85
PTX3P26022 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.52□□□□□ -1.85
PTX3P26022 snoU13.30-201ENST00000458951 104 ntBASIC3.52□□□□□ -1.85
PTX3P26022 RNU7-169P-201ENST00000459456 61 ntBASIC3.52□□□□□ -1.85
PTX3P26022 AC104564.1-201ENST00000493028 407 ntBASIC3.52□□□□□ -1.85
PTX3P26022 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.52□□□□□ -1.85
PTX3P26022 SNORA31.1-201ENST00000515993 133 ntBASIC3.52□□□□□ -1.85
PTX3P26022 SNORA31.5-201ENST00000516190 133 ntBASIC3.52□□□□□ -1.85
PTX3P26022 RNU6-635P-201ENST00000516651 102 ntBASIC3.52□□□□□ -1.85
PTX3P26022 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.52□□□□□ -1.85
PTX3P26022 MIR3149-201ENST00000584629 83 ntBASIC3.52□□□□□ -1.85
PTX3P26022 U4.1-201ENST00000620349 87 ntBASIC3.52□□□□□ -1.85
PTX3P26022 SNORA50A-202ENST00000629536 136 ntBASIC3.52□□□□□ -1.85
PTX3P26022 AL353743.1-202ENST00000431724 1695 ntBASIC3.52□□□□□ -1.85
PTX3P26022 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PTX3P26022 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PTX3P26022 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
PTX3P26022 AC073073.2-201ENST00000609827 2578 ntBASIC3.51□□□□□ -1.85
PTX3P26022 SNORD115-32-201ENST00000364079 82 ntBASIC3.51□□□□□ -1.85
PTX3P26022 Y_RNA.276-201ENST00000364732 109 ntBASIC3.51□□□□□ -1.85
PTX3P26022 RNU6-1222P-201ENST00000384615 107 ntBASIC3.51□□□□□ -1.85
PTX3P26022 RNU6-1109P-201ENST00000391187 107 ntBASIC3.51□□□□□ -1.85
PTX3P26022 RNU6-1077P-201ENST00000410506 102 ntBASIC3.51□□□□□ -1.85
PTX3P26022 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.51□□□□□ -1.85
PTX3P26022 RPS3AP12-201ENST00000443616 753 ntBASIC3.51□□□□□ -1.85
PTX3P26022 OR2AQ1P-201ENST00000451972 200 ntBASIC3.51□□□□□ -1.85
PTX3P26022 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.51□□□□□ -1.85
PTX3P26022 AP001025.1-201ENST00000486139 332 ntBASIC3.51□□□□□ -1.85
PTX3P26022 RPL23AP75-201ENST00000491601 451 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 165.8 ms