Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 AL157392.4-201ENST00000609756 345 ntBASIC1.18□□□□□ -2.22
SOD1P00441 AP000720.1-201ENST00000625091 483 ntBASIC1.18□□□□□ -2.22
SOD1P00441 AC091812.1-201ENST00000432235 1948 ntBASIC1.17□□□□□ -2.22
SOD1P00441 RNU6-190P-201ENST00000384154 102 ntBASIC1.17□□□□□ -2.22
SOD1P00441 RNU6-1274P-201ENST00000384557 107 ntBASIC1.17□□□□□ -2.22
SOD1P00441 RNU6-83P-201ENST00000384568 112 ntBASIC1.17□□□□□ -2.22
SOD1P00441 RNU6-1176P-201ENST00000390955 107 ntBASIC1.17□□□□□ -2.22
SOD1P00441 CBX3P9-201ENST00000402326 552 ntBASIC1.17□□□□□ -2.22
SOD1P00441 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SOD1P00441 AC009518.2-201ENST00000418056 731 ntBASIC1.17□□□□□ -2.22
SOD1P00441 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.17□□□□□ -2.22
SOD1P00441 AC244505.5-201ENST00000443639 207 ntBASIC1.17□□□□□ -2.22
SOD1P00441 HMGB1P30-201ENST00000492455 606 ntBASIC1.17□□□□□ -2.22
SOD1P00441 MIR4509-3-201ENST00000578671 94 ntBASIC1.17□□□□□ -2.22
SOD1P00441 MIR4509-2-201ENST00000583920 94 ntBASIC1.17□□□□□ -2.22
SOD1P00441 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.17□□□□□ -2.22
SOD1P00441 BNIP3P40-201ENST00000596017 556 ntBASIC1.17□□□□□ -2.22
SOD1P00441 MIR6078-201ENST00000611069 100 ntBASIC1.17□□□□□ -2.22
SOD1P00441 MIR4509-1-201ENST00000618224 94 ntBASIC1.17□□□□□ -2.22
SOD1P00441 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.17□□□□□ -2.22
SOD1P00441 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.17□□□□□ -2.22
SOD1P00441 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SOD1P00441 AC006927.4-201ENST00000639187 543 ntBASIC1.17□□□□□ -2.22
SOD1P00441 MTND4P16-201ENST00000466108 1367 ntBASIC1.17□□□□□ -2.22
SOD1P00441 RNU6-655P-201ENST00000362858 107 ntBASIC1.16□□□□□ -2.22
SOD1P00441 Y_RNA.97-201ENST00000363094 102 ntBASIC1.16□□□□□ -2.22
SOD1P00441 Y_RNA.164-201ENST00000363709 102 ntBASIC1.16□□□□□ -2.22
SOD1P00441 RNU6-1164P-201ENST00000364428 107 ntBASIC1.16□□□□□ -2.22
SOD1P00441 Y_RNA.302-201ENST00000364997 102 ntBASIC1.16□□□□□ -2.22
SOD1P00441 RNU6-546P-201ENST00000383991 107 ntBASIC1.16□□□□□ -2.22
SOD1P00441 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
SOD1P00441 RNA5SP390-201ENST00000410191 113 ntBASIC1.16□□□□□ -2.22
SOD1P00441 RNU2-23P-201ENST00000410545 195 ntBASIC1.16□□□□□ -2.22
SOD1P00441 RNU2-32P-201ENST00000411193 191 ntBASIC1.16□□□□□ -2.22
SOD1P00441 SRIP3-201ENST00000413200 219 ntBASIC1.16□□□□□ -2.22
SOD1P00441 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.16□□□□□ -2.22
SOD1P00441 UBE2V1P10-201ENST00000414685 269 ntBASIC1.16□□□□□ -2.22
SOD1P00441 AC138623.1-201ENST00000418060 216 ntBASIC1.16□□□□□ -2.22
SOD1P00441 AC006366.1-201ENST00000422002 759 ntBASIC1.16□□□□□ -2.22
SOD1P00441 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.16□□□□□ -2.22
SOD1P00441 UBE2V1P4-201ENST00000425374 344 ntBASIC1.16□□□□□ -2.22
SOD1P00441 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.16□□□□□ -2.22
SOD1P00441 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.16□□□□□ -2.22
SOD1P00441 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.16□□□□□ -2.22
SOD1P00441 AC245102.2-201ENST00000448956 180 ntBASIC1.16□□□□□ -2.22
SOD1P00441 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.16□□□□□ -2.22
SOD1P00441 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.16□□□□□ -2.22
SOD1P00441 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.16□□□□□ -2.22
SOD1P00441 PRELID3BP1-201ENST00000457142 540 ntBASIC1.16□□□□□ -2.22
SOD1P00441 AC093852.1-201ENST00000503587 266 ntBASIC1.16□□□□□ -2.22
SOD1P00441 HSPE1P23-201ENST00000509838 286 ntBASIC1.16□□□□□ -2.22
SOD1P00441 Y_RNA.689-201ENST00000516589 107 ntBASIC1.16□□□□□ -2.22
SOD1P00441 AP003392.2-201ENST00000527269 208 ntBASIC1.16□□□□□ -2.22
SOD1P00441 AC011979.2-201ENST00000527568 352 ntBASIC1.16□□□□□ -2.22
SOD1P00441 AC022616.8-201ENST00000533569 253 ntBASIC1.16□□□□□ -2.22
SOD1P00441 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.16□□□□□ -2.22
SOD1P00441 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.16□□□□□ -2.22
SOD1P00441 MTCYBP33-201ENST00000575007 1130 ntBASIC1.16□□□□□ -2.22
SOD1P00441 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.16□□□□□ -2.22
SOD1P00441 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.16□□□□□ -2.22
SOD1P00441 MIR3118-1-201ENST00000581787 76 ntBASIC1.16□□□□□ -2.22
SOD1P00441 AC080078.3-201ENST00000605407 463 ntBASIC1.16□□□□□ -2.22
SOD1P00441 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.16□□□□□ -2.22
SOD1P00441 AL139418.1-201ENST00000613613 177 ntBASIC1.16□□□□□ -2.22
SOD1P00441 AC024940.5-201ENST00000622889 474 ntBASIC1.16□□□□□ -2.22
SOD1P00441 AC093648.1-201ENST00000623546 606 ntBASIC1.16□□□□□ -2.22
SOD1P00441 AC092192.1-201ENST00000633154 1018 ntBASIC1.16□□□□□ -2.22
SOD1P00441 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.16□□□□□ -2.22
SOD1P00441 RNU6-858P-201ENST00000362436 107 ntBASIC1.15□□□□□ -2.23
SOD1P00441 Y_RNA.40-201ENST00000362645 93 ntBASIC1.15□□□□□ -2.23
SOD1P00441 RNU1-22P-201ENST00000363334 158 ntBASIC1.15□□□□□ -2.23
SOD1P00441 SNORD14B-201ENST00000364533 90 ntBASIC1.15□□□□□ -2.23
SOD1P00441 SNORD14D-201ENST00000384390 87 ntBASIC1.15□□□□□ -2.23
SOD1P00441 SNORD115.1-201ENST00000391109 76 ntBASIC1.15□□□□□ -2.23
SOD1P00441 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC1.15□□□□□ -2.23
SOD1P00441 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.15□□□□□ -2.23
SOD1P00441 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.15□□□□□ -2.23
SOD1P00441 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.15□□□□□ -2.23
SOD1P00441 HMGN2P18-201ENST00000450680 270 ntBASIC1.15□□□□□ -2.23
SOD1P00441 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.15□□□□□ -2.23
SOD1P00441 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.15□□□□□ -2.23
SOD1P00441 AC008834.1-201ENST00000511612 175 ntBASIC1.15□□□□□ -2.23
SOD1P00441 PTP4A1P4-201ENST00000512479 322 ntBASIC1.15□□□□□ -2.23
SOD1P00441 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.15□□□□□ -2.23
SOD1P00441 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.15□□□□□ -2.23
SOD1P00441 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.15□□□□□ -2.23
SOD1P00441 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.15□□□□□ -2.23
SOD1P00441 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.15□□□□□ -2.23
SOD1P00441 AC008269.2-201ENST00000561915 1105 ntBASIC1.15□□□□□ -2.23
SOD1P00441 AP002360.4-201ENST00000606980 481 ntBASIC1.15□□□□□ -2.23
SOD1P00441 U1.36-201ENST00000620684 176 ntBASIC1.15□□□□□ -2.23
SOD1P00441 AC103706.2-201ENST00000638080 240 ntBASIC1.15□□□□□ -2.23
SOD1P00441 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.15□□□□□ -2.23
SOD1P00441 AL445523.1-201ENST00000451184 1362 ntBASIC1.14□□□□□ -2.23
SOD1P00441 SNORD3E-201ENST00000362899 217 ntBASIC1.14□□□□□ -2.23
SOD1P00441 RNU6-1210P-201ENST00000363775 107 ntBASIC1.14□□□□□ -2.23
SOD1P00441 RNY4P16-201ENST00000364768 94 ntBASIC1.14□□□□□ -2.23
SOD1P00441 RNU4-91P-201ENST00000364778 135 ntBASIC1.14□□□□□ -2.23
SOD1P00441 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
SOD1P00441 RNU6-906P-201ENST00000384700 70 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 211.3 ms