Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 EBAG9P1-201ENST00000418955 543 ntBASIC0.58□□□□□ -2.32
TRAV13-1A0A0B4J241 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.58□□□□□ -2.32
TRAV13-1A0A0B4J241 SNX2P2-201ENST00000424553 323 ntBASIC0.58□□□□□ -2.32
TRAV13-1A0A0B4J241 AL365400.1-201ENST00000431854 640 ntBASIC0.58□□□□□ -2.32
TRAV13-1A0A0B4J241 AC005094.1-201ENST00000440420 368 ntBASIC0.58□□□□□ -2.32
TRAV13-1A0A0B4J241 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.58□□□□□ -2.32
TRAV13-1A0A0B4J241 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
TRAV13-1A0A0B4J241 snoU13.23-201ENST00000458863 104 ntBASIC0.58□□□□□ -2.32
TRAV13-1A0A0B4J241 RPL39P36-201ENST00000490784 156 ntBASIC0.58□□□□□ -2.32
TRAV13-1A0A0B4J241 PSMC1P5-201ENST00000512850 177 ntBASIC0.58□□□□□ -2.32
TRAV13-1A0A0B4J241 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.58□□□□□ -2.32
TRAV13-1A0A0B4J241 RN7SKP88-201ENST00000516847 250 ntBASIC0.58□□□□□ -2.32
TRAV13-1A0A0B4J241 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.58□□□□□ -2.32
TRAV13-1A0A0B4J241 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.58□□□□□ -2.32
TRAV13-1A0A0B4J241 AP005136.1-201ENST00000579765 429 ntBASIC0.58□□□□□ -2.32
TRAV13-1A0A0B4J241 7SK.8-201ENST00000612110 250 ntBASIC0.58□□□□□ -2.32
TRAV13-1A0A0B4J241 7SK.11-201ENST00000615477 250 ntBASIC0.58□□□□□ -2.32
TRAV13-1A0A0B4J241 7SK.13-201ENST00000622040 250 ntBASIC0.58□□□□□ -2.32
TRAV13-1A0A0B4J241 AL356094.1-201ENST00000624663 1212 ntBASIC0.58□□□□□ -2.32
TRAV13-1A0A0B4J241 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
TRAV13-1A0A0B4J241 LINC02555-201ENST00000563933 1951 ntBASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 HSBP1P2-201ENST00000299671 229 ntBASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 snoU2_19.1-201ENST00000362361 80 ntBASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 RNA5SP99-201ENST00000364020 114 ntBASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 RNU6-14P-201ENST00000384630 106 ntBASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 MIR520A-201ENST00000384862 85 ntBASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 Y_RNA.597-201ENST00000410463 100 ntBASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 RN7SKP61-201ENST00000410642 295 ntBASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 RNU2-64P-201ENST00000411315 191 ntBASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 AC016831.2-201ENST00000417179 352 ntBASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 RPS15AP12-201ENST00000419498 388 ntBASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 AL606517.1-201ENST00000446914 387 ntBASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 HSPE1P13-201ENST00000451143 297 ntBASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 RPS27AP8-201ENST00000452665 445 ntBASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 RNU6-333P-201ENST00000459117 107 ntBASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 AC134050.1-201ENST00000495088 933 ntBASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 AC145146.1-201ENST00000496370 254 ntBASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 AC097473.1-201ENST00000508142 408 ntBASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 RNA5SP437-201ENST00000517249 129 ntBASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 HMGB1P33-201ENST00000563485 527 ntBASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 MTCYBP33-201ENST00000575007 1130 ntBASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 AC060771.1-201ENST00000582031 164 ntBASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 AC022022.2-201ENST00000602989 360 ntBASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 AP000676.3-201ENST00000623299 569 ntBASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 MIR6866-201ENST00000638146 69 ntBASIC0.57□□□□□ -2.32
TRAV13-1A0A0B4J241 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
TRAV13-1A0A0B4J241 RNU5B-1-201ENST00000363286 116 ntBASIC0.56□□□□□ -2.32
TRAV13-1A0A0B4J241 SNORA4.1-201ENST00000364263 144 ntBASIC0.56□□□□□ -2.32
TRAV13-1A0A0B4J241 MIR515-2-201ENST00000384883 83 ntBASIC0.56□□□□□ -2.32
TRAV13-1A0A0B4J241 MIR515-1-201ENST00000384884 83 ntBASIC0.56□□□□□ -2.32
TRAV13-1A0A0B4J241 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
TRAV13-1A0A0B4J241 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.56□□□□□ -2.32
TRAV13-1A0A0B4J241 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.56□□□□□ -2.32
TRAV13-1A0A0B4J241 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.56□□□□□ -2.32
TRAV13-1A0A0B4J241 RPS15AP10-201ENST00000432472 382 ntBASIC0.56□□□□□ -2.32
TRAV13-1A0A0B4J241 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.56□□□□□ -2.32
TRAV13-1A0A0B4J241 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.56□□□□□ -2.32
TRAV13-1A0A0B4J241 AC121161.1-201ENST00000510606 652 ntBASIC0.56□□□□□ -2.32
TRAV13-1A0A0B4J241 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.56□□□□□ -2.32
TRAV13-1A0A0B4J241 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.56□□□□□ -2.32
TRAV13-1A0A0B4J241 RNU6-351P-201ENST00000516097 100 ntBASIC0.56□□□□□ -2.32
TRAV13-1A0A0B4J241 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.56□□□□□ -2.32
TRAV13-1A0A0B4J241 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.56□□□□□ -2.32
TRAV13-1A0A0B4J241 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.56□□□□□ -2.32
TRAV13-1A0A0B4J241 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.56□□□□□ -2.32
TRAV13-1A0A0B4J241 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
TRAV13-1A0A0B4J241 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.56□□□□□ -2.32
TRAV13-1A0A0B4J241 AC025678.1-201ENST00000567861 338 ntBASIC0.56□□□□□ -2.32
TRAV13-1A0A0B4J241 MIR4698-201ENST00000577795 80 ntBASIC0.56□□□□□ -2.32
TRAV13-1A0A0B4J241 FAM71BP1-201ENST00000604431 523 ntBASIC0.56□□□□□ -2.32
TRAV13-1A0A0B4J241 BNIP3P31-201ENST00000604515 566 ntBASIC0.56□□□□□ -2.32
TRAV13-1A0A0B4J241 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.56□□□□□ -2.32
TRAV13-1A0A0B4J241 MIR8084-201ENST00000614105 89 ntBASIC0.56□□□□□ -2.32
TRAV13-1A0A0B4J241 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.56□□□□□ -2.32
TRAV13-1A0A0B4J241 MIR532-201ENST00000385025 91 ntBASIC0.55□□□□□ -2.32
TRAV13-1A0A0B4J241 AC068533.2-201ENST00000411872 306 ntBASIC0.55□□□□□ -2.32
TRAV13-1A0A0B4J241 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.55□□□□□ -2.32
TRAV13-1A0A0B4J241 HMGB1P30-201ENST00000492455 606 ntBASIC0.55□□□□□ -2.32
TRAV13-1A0A0B4J241 AC103851.1-201ENST00000506833 274 ntBASIC0.55□□□□□ -2.32
TRAV13-1A0A0B4J241 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.55□□□□□ -2.32
TRAV13-1A0A0B4J241 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.55□□□□□ -2.32
TRAV13-1A0A0B4J241 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.55□□□□□ -2.32
TRAV13-1A0A0B4J241 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.55□□□□□ -2.32
TRAV13-1A0A0B4J241 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.55□□□□□ -2.32
TRAV13-1A0A0B4J241 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.55□□□□□ -2.32
TRAV13-1A0A0B4J241 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.55□□□□□ -2.32
TRAV13-1A0A0B4J241 AC090578.1-201ENST00000604955 591 ntBASIC0.55□□□□□ -2.32
TRAV13-1A0A0B4J241 AL365434.2-201ENST00000607979 234 ntBASIC0.55□□□□□ -2.32
TRAV13-1A0A0B4J241 AL512643.1-201ENST00000635735 524 ntBASIC0.55□□□□□ -2.32
TRAV13-1A0A0B4J241 MTND4P21-201ENST00000453886 1357 ntBASIC0.55□□□□□ -2.32
TRAV13-1A0A0B4J241 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.55□□□□□ -2.32
TRAV13-1A0A0B4J241 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.54□□□□□ -2.32
TRAV13-1A0A0B4J241 RNU6-212P-201ENST00000362642 104 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms