Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.5□□□□□ -1.85
PNKPQ96T60 RPL23AP50-201ENST00000434149 455 ntBASIC3.5□□□□□ -1.85
PNKPQ96T60 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.5□□□□□ -1.85
PNKPQ96T60 AC006028.1-201ENST00000438379 402 ntBASIC3.5□□□□□ -1.85
PNKPQ96T60 MTND3P2-201ENST00000438452 342 ntBASIC3.5□□□□□ -1.85
PNKPQ96T60 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.5□□□□□ -1.85
PNKPQ96T60 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.5□□□□□ -1.85
PNKPQ96T60 AC115115.1-201ENST00000449927 248 ntBASIC3.5□□□□□ -1.85
PNKPQ96T60 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.5□□□□□ -1.85
PNKPQ96T60 AC008571.1-201ENST00000467232 300 ntBASIC3.5□□□□□ -1.85
PNKPQ96T60 RNA5SP217-201ENST00000515959 91 ntBASIC3.5□□□□□ -1.85
PNKPQ96T60 RNU6-572P-201ENST00000516724 80 ntBASIC3.5□□□□□ -1.85
PNKPQ96T60 SNORA31.19-201ENST00000517079 126 ntBASIC3.5□□□□□ -1.85
PNKPQ96T60 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.5□□□□□ -1.85
PNKPQ96T60 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.5□□□□□ -1.85
PNKPQ96T60 TRAV32-201ENST00000553993 340 ntBASIC3.5□□□□□ -1.85
PNKPQ96T60 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.5□□□□□ -1.85
PNKPQ96T60 MIR4276-201ENST00000584832 70 ntBASIC3.5□□□□□ -1.85
PNKPQ96T60 AC011471.1-201ENST00000585766 187 ntBASIC3.5□□□□□ -1.85
PNKPQ96T60 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.5□□□□□ -1.85
PNKPQ96T60 AC012493.2-201ENST00000595083 291 ntBASIC3.5□□□□□ -1.85
PNKPQ96T60 AC006157.1-201ENST00000611750 366 ntBASIC3.5□□□□□ -1.85
PNKPQ96T60 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.5□□□□□ -1.85
PNKPQ96T60 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.5□□□□□ -1.85
PNKPQ96T60 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.5□□□□□ -1.85
PNKPQ96T60 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PNKPQ96T60 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PNKPQ96T60 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.49□□□□□ -1.85
PNKPQ96T60 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PNKPQ96T60 SNORA31-201ENST00000362607 130 ntBASIC3.49□□□□□ -1.85
PNKPQ96T60 RNU6-490P-201ENST00000362985 107 ntBASIC3.49□□□□□ -1.85
PNKPQ96T60 RNU6-1032P-201ENST00000384100 107 ntBASIC3.49□□□□□ -1.85
PNKPQ96T60 RNU6-166P-201ENST00000384371 107 ntBASIC3.49□□□□□ -1.85
PNKPQ96T60 RNY1P14-201ENST00000384426 108 ntBASIC3.49□□□□□ -1.85
PNKPQ96T60 MIR10A-201ENST00000385043 110 ntBASIC3.49□□□□□ -1.85
PNKPQ96T60 RNU6-1106P-201ENST00000390845 107 ntBASIC3.49□□□□□ -1.85
PNKPQ96T60 MRPL42P3-201ENST00000401492 326 ntBASIC3.49□□□□□ -1.85
PNKPQ96T60 AL356057.3-201ENST00000402607 340 ntBASIC3.49□□□□□ -1.85
PNKPQ96T60 RNU2-68P-201ENST00000410878 191 ntBASIC3.49□□□□□ -1.85
PNKPQ96T60 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.49□□□□□ -1.85
PNKPQ96T60 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PNKPQ96T60 AL133396.1-201ENST00000432048 687 ntBASIC3.49□□□□□ -1.85
PNKPQ96T60 AC092573.2-201ENST00000434546 243 ntBASIC3.49□□□□□ -1.85
PNKPQ96T60 Z82210.1-201ENST00000440037 231 ntBASIC3.49□□□□□ -1.85
PNKPQ96T60 NDUFB1P2-201ENST00000449477 176 ntBASIC3.49□□□□□ -1.85
PNKPQ96T60 AL031274.1-201ENST00000450334 232 ntBASIC3.49□□□□□ -1.85
PNKPQ96T60 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PNKPQ96T60 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.49□□□□□ -1.85
PNKPQ96T60 RPL21P13-201ENST00000488305 481 ntBASIC3.49□□□□□ -1.85
PNKPQ96T60 AC021146.2-201ENST00000504736 556 ntBASIC3.49□□□□□ -1.85
PNKPQ96T60 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.49□□□□□ -1.85
PNKPQ96T60 Y_RNA.720-201ENST00000517166 92 ntBASIC3.49□□□□□ -1.85
PNKPQ96T60 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
PNKPQ96T60 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.49□□□□□ -1.85
PNKPQ96T60 AC005476.1-201ENST00000554427 397 ntBASIC3.49□□□□□ -1.85
PNKPQ96T60 MIR5680-201ENST00000577577 84 ntBASIC3.49□□□□□ -1.85
PNKPQ96T60 MIR3690-201ENST00000580266 75 ntBASIC3.49□□□□□ -1.85
PNKPQ96T60 MIR4680-201ENST00000580906 66 ntBASIC3.49□□□□□ -1.85
PNKPQ96T60 AC093908.1-201ENST00000623125 8092 ntBASIC3.49□□□□□ -1.85
PNKPQ96T60 AL356274.2-201ENST00000624379 3752 ntBASIC3.49□□□□□ -1.85
PNKPQ96T60 MTND5P16-201ENST00000460269 1703 ntBASIC3.49□□□□□ -1.85
PNKPQ96T60 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.49□□□□□ -1.85
PNKPQ96T60 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
PNKPQ96T60 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
PNKPQ96T60 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PNKPQ96T60 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.48□□□□□ -1.85
PNKPQ96T60 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PNKPQ96T60 SNORA46-201ENST00000384762 135 ntBASIC3.48□□□□□ -1.85
PNKPQ96T60 RNU6-1197P-201ENST00000391183 107 ntBASIC3.48□□□□□ -1.85
PNKPQ96T60 SNORA40C-201ENST00000391285 128 ntBASIC3.48□□□□□ -1.85
PNKPQ96T60 U3.42-201ENST00000408746 214 ntBASIC3.48□□□□□ -1.85
PNKPQ96T60 AC096664.2-201ENST00000411843 406 ntBASIC3.48□□□□□ -1.85
PNKPQ96T60 SNORD56-201ENST00000413522 71 ntBASIC3.48□□□□□ -1.85
PNKPQ96T60 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.48□□□□□ -1.85
PNKPQ96T60 BX276092.3-201ENST00000424182 230 ntBASIC3.48□□□□□ -1.85
PNKPQ96T60 AC008267.5-201ENST00000424928 265 ntBASIC3.48□□□□□ -1.85
PNKPQ96T60 AL627311.1-201ENST00000431514 115 ntBASIC3.48□□□□□ -1.85
PNKPQ96T60 GSTA11P-201ENST00000452866 669 ntBASIC3.48□□□□□ -1.85
PNKPQ96T60 RPL12P25-201ENST00000455592 494 ntBASIC3.48□□□□□ -1.85
PNKPQ96T60 SNRPGP5-201ENST00000456003 220 ntBASIC3.48□□□□□ -1.85
PNKPQ96T60 CEACAMP4-201ENST00000457676 421 ntBASIC3.48□□□□□ -1.85
PNKPQ96T60 MTND5P22-201ENST00000458380 195 ntBASIC3.48□□□□□ -1.85
PNKPQ96T60 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.48□□□□□ -1.85
PNKPQ96T60 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.48□□□□□ -1.85
PNKPQ96T60 AC110794.1-201ENST00000505816 425 ntBASIC3.48□□□□□ -1.85
PNKPQ96T60 AC023141.12-201ENST00000512399 199 ntBASIC3.48□□□□□ -1.85
PNKPQ96T60 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PNKPQ96T60 OR5D17P-201ENST00000531492 978 ntBASIC3.48□□□□□ -1.85
PNKPQ96T60 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.48□□□□□ -1.85
PNKPQ96T60 MIR3976-201ENST00000606807 139 ntBASIC3.48□□□□□ -1.85
PNKPQ96T60 AL591516.1-201ENST00000611326 274 ntBASIC3.48□□□□□ -1.85
PNKPQ96T60 Z69720.2-201ENST00000624755 279 ntBASIC3.48□□□□□ -1.85
PNKPQ96T60 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PNKPQ96T60 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.48□□□□□ -1.85
PNKPQ96T60 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
PNKPQ96T60 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PNKPQ96T60 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PNKPQ96T60 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.48□□□□□ -1.85
PNKPQ96T60 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PNKPQ96T60 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms