Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 AC091167.4-201ENST00000605079 184 ntBASIC3.79□□□□□ -1.8
NPHS1O60500 MIR376A1-201ENST00000616574 68 ntBASIC3.79□□□□□ -1.8
NPHS1O60500 AC011944.2-201ENST00000624440 683 ntBASIC3.79□□□□□ -1.8
NPHS1O60500 SCARNA4-201ENST00000629045 128 ntBASIC3.79□□□□□ -1.8
NPHS1O60500 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.79□□□□□ -1.8
NPHS1O60500 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
NPHS1O60500 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.79□□□□□ -1.8
NPHS1O60500 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.79□□□□□ -1.8
NPHS1O60500 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NPHS1O60500 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NPHS1O60500 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.78□□□□□ -1.8
NPHS1O60500 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NPHS1O60500 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NPHS1O60500 Y_RNA.143-201ENST00000363520 106 ntBASIC3.78□□□□□ -1.8
NPHS1O60500 Y_RNA.237-201ENST00000364439 102 ntBASIC3.78□□□□□ -1.8
NPHS1O60500 Y_RNA.478-201ENST00000384358 107 ntBASIC3.78□□□□□ -1.8
NPHS1O60500 SNORD116-20-201ENST00000384529 92 ntBASIC3.78□□□□□ -1.8
NPHS1O60500 SNORD115-46-201ENST00000390982 71 ntBASIC3.78□□□□□ -1.8
NPHS1O60500 U3.22-201ENST00000391120 215 ntBASIC3.78□□□□□ -1.8
NPHS1O60500 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.78□□□□□ -1.8
NPHS1O60500 AC096920.1-201ENST00000423991 241 ntBASIC3.78□□□□□ -1.8
NPHS1O60500 BX679664.1-201ENST00000434429 253 ntBASIC3.78□□□□□ -1.8
NPHS1O60500 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.78□□□□□ -1.8
NPHS1O60500 RPL37P4-201ENST00000448908 268 ntBASIC3.78□□□□□ -1.8
NPHS1O60500 AL353705.4-201ENST00000449661 238 ntBASIC3.78□□□□□ -1.8
NPHS1O60500 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.78□□□□□ -1.8
NPHS1O60500 AC093840.1-201ENST00000511599 336 ntBASIC3.78□□□□□ -1.8
NPHS1O60500 MIR2355-201ENST00000517199 87 ntBASIC3.78□□□□□ -1.8
NPHS1O60500 RN7SL600P-201ENST00000581811 299 ntBASIC3.78□□□□□ -1.8
NPHS1O60500 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.78□□□□□ -1.8
NPHS1O60500 RPL23AP88-201ENST00000605759 454 ntBASIC3.78□□□□□ -1.8
NPHS1O60500 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.78□□□□□ -1.8
NPHS1O60500 SRP72P2-201ENST00000344851 1979 ntBASIC3.78□□□□□ -1.8
NPHS1O60500 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
NPHS1O60500 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
NPHS1O60500 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NPHS1O60500 CEP170P1-201ENST00000502249 4587 ntBASIC3.77□□□□□ -1.81
NPHS1O60500 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.77□□□□□ -1.81
NPHS1O60500 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.77□□□□□ -1.81
NPHS1O60500 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NPHS1O60500 RNU6-1301P-201ENST00000362724 104 ntBASIC3.77□□□□□ -1.81
NPHS1O60500 RNA5SP443-201ENST00000363083 132 ntBASIC3.77□□□□□ -1.81
NPHS1O60500 SNORD27-201ENST00000363981 72 ntBASIC3.77□□□□□ -1.81
NPHS1O60500 RNU1-100P-201ENST00000365255 165 ntBASIC3.77□□□□□ -1.81
NPHS1O60500 Y_RNA.416-201ENST00000384014 113 ntBASIC3.77□□□□□ -1.81
NPHS1O60500 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
NPHS1O60500 MIR888-201ENST00000401186 77 ntBASIC3.77□□□□□ -1.81
NPHS1O60500 AL079342.1-201ENST00000401460 267 ntBASIC3.77□□□□□ -1.81
NPHS1O60500 MIR1183-201ENST00000408856 89 ntBASIC3.77□□□□□ -1.81
NPHS1O60500 RNU2-20P-201ENST00000410425 191 ntBASIC3.77□□□□□ -1.81
NPHS1O60500 AL162151.2-201ENST00000448875 158 ntBASIC3.77□□□□□ -1.81
NPHS1O60500 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.77□□□□□ -1.81
NPHS1O60500 AC022868.1-201ENST00000517767 391 ntBASIC3.77□□□□□ -1.81
NPHS1O60500 AP003730.1-201ENST00000524605 285 ntBASIC3.77□□□□□ -1.81
NPHS1O60500 DEFB108E-201ENST00000524692 240 ntBASIC3.77□□□□□ -1.81
NPHS1O60500 AC008745.1-201ENST00000604064 271 ntBASIC3.77□□□□□ -1.81
NPHS1O60500 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.77□□□□□ -1.81
NPHS1O60500 AC240442.1-201ENST00000616055 283 ntBASIC3.77□□□□□ -1.81
NPHS1O60500 MIR6134-201ENST00000617606 109 ntBASIC3.77□□□□□ -1.81
NPHS1O60500 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.77□□□□□ -1.81
NPHS1O60500 AF127577.6-201ENST00000623352 2191 ntBASIC3.77□□□□□ -1.81
NPHS1O60500 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NPHS1O60500 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.77□□□□□ -1.81
NPHS1O60500 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.77□□□□□ -1.81
NPHS1O60500 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
NPHS1O60500 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NPHS1O60500 LINC02555-201ENST00000563933 1951 ntBASIC3.76□□□□□ -1.81
NPHS1O60500 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NPHS1O60500 AL391987.6-201ENST00000305671 199 ntBASIC3.76□□□□□ -1.81
NPHS1O60500 MIR423-201ENST00000362201 94 ntBASIC3.76□□□□□ -1.81
NPHS1O60500 Y_RNA.20-201ENST00000362479 113 ntBASIC3.76□□□□□ -1.81
NPHS1O60500 SNORD56.1-201ENST00000362913 68 ntBASIC3.76□□□□□ -1.81
NPHS1O60500 RNU1-32P-201ENST00000363937 159 ntBASIC3.76□□□□□ -1.81
NPHS1O60500 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.76□□□□□ -1.81
NPHS1O60500 RNU6-1286P-201ENST00000383871 107 ntBASIC3.76□□□□□ -1.81
NPHS1O60500 RNU6-17P-201ENST00000384245 107 ntBASIC3.76□□□□□ -1.81
NPHS1O60500 RNU6-18P-201ENST00000384527 107 ntBASIC3.76□□□□□ -1.81
NPHS1O60500 MIR32-201ENST00000384965 70 ntBASIC3.76□□□□□ -1.81
NPHS1O60500 AL138878.1-201ENST00000405131 347 ntBASIC3.76□□□□□ -1.81
NPHS1O60500 RHEBP3-201ENST00000411920 351 ntBASIC3.76□□□□□ -1.81
NPHS1O60500 AP000907.1-201ENST00000428428 510 ntBASIC3.76□□□□□ -1.81
NPHS1O60500 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.76□□□□□ -1.81
NPHS1O60500 HMGN2P7-201ENST00000456186 273 ntBASIC3.76□□□□□ -1.81
NPHS1O60500 RPS26P21-201ENST00000475397 348 ntBASIC3.76□□□□□ -1.81
NPHS1O60500 RN7SL459P-201ENST00000481078 302 ntBASIC3.76□□□□□ -1.81
NPHS1O60500 AC105137.1-201ENST00000484355 562 ntBASIC3.76□□□□□ -1.81
NPHS1O60500 RPS29P20-201ENST00000489592 171 ntBASIC3.76□□□□□ -1.81
NPHS1O60500 AF186996.7-201ENST00000492781 209 ntBASIC3.76□□□□□ -1.81
NPHS1O60500 RNU6-1012P-201ENST00000516606 109 ntBASIC3.76□□□□□ -1.81
NPHS1O60500 RNU6-928P-201ENST00000516876 104 ntBASIC3.76□□□□□ -1.81
NPHS1O60500 IGKV2D-19-201ENST00000523346 262 ntBASIC3.76□□□□□ -1.81
NPHS1O60500 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.76□□□□□ -1.81
NPHS1O60500 AC023824.2-201ENST00000566185 400 ntBASIC3.76□□□□□ -1.81
NPHS1O60500 AC120057.2-201ENST00000571520 271 ntBASIC3.76□□□□□ -1.81
NPHS1O60500 Y_RNA.772-201ENST00000606692 102 ntBASIC3.76□□□□□ -1.81
NPHS1O60500 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.76□□□□□ -1.81
NPHS1O60500 AC011476.5-201ENST00000615594 130 ntBASIC3.76□□□□□ -1.81
NPHS1O60500 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
NPHS1O60500 MIR7641-1-201ENST00000627518 61 ntBASIC3.76□□□□□ -1.81
NPHS1O60500 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 390.5 ms