Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 GZMAP1-201ENST00000503054 631 ntBASIC2.85□□□□□ -1.95
LRRC53A6NM62 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.85□□□□□ -1.95
LRRC53A6NM62 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.85□□□□□ -1.95
LRRC53A6NM62 AC023050.3-201ENST00000541142 333 ntBASIC2.85□□□□□ -1.95
LRRC53A6NM62 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.85□□□□□ -1.95
LRRC53A6NM62 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.85□□□□□ -1.95
LRRC53A6NM62 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.85□□□□□ -1.95
LRRC53A6NM62 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.85□□□□□ -1.95
LRRC53A6NM62 AC010620.2-201ENST00000600135 313 ntBASIC2.85□□□□□ -1.95
LRRC53A6NM62 CTHRC1P1-201ENST00000605383 469 ntBASIC2.85□□□□□ -1.95
LRRC53A6NM62 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.85□□□□□ -1.95
LRRC53A6NM62 AC100810.6-201ENST00000638068 285 ntBASIC2.85□□□□□ -1.95
LRRC53A6NM62 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
LRRC53A6NM62 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.85□□□□□ -1.95
LRRC53A6NM62 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
LRRC53A6NM62 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
LRRC53A6NM62 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LRRC53A6NM62 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.84□□□□□ -1.95
LRRC53A6NM62 U3.12-201ENST00000364498 214 ntBASIC2.84□□□□□ -1.95
LRRC53A6NM62 AL356057.3-201ENST00000402607 340 ntBASIC2.84□□□□□ -1.95
LRRC53A6NM62 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.84□□□□□ -1.95
LRRC53A6NM62 RPL30P16-201ENST00000419341 429 ntBASIC2.84□□□□□ -1.95
LRRC53A6NM62 OSTCP8-201ENST00000445117 448 ntBASIC2.84□□□□□ -1.95
LRRC53A6NM62 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.84□□□□□ -1.95
LRRC53A6NM62 AC107626.1-201ENST00000471084 183 ntBASIC2.84□□□□□ -1.95
LRRC53A6NM62 RPL23AP45-201ENST00000476406 468 ntBASIC2.84□□□□□ -1.95
LRRC53A6NM62 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.84□□□□□ -1.95
LRRC53A6NM62 AC079140.5-201ENST00000507882 310 ntBASIC2.84□□□□□ -1.95
LRRC53A6NM62 SLC25A15P5-201ENST00000508033 253 ntBASIC2.84□□□□□ -1.95
LRRC53A6NM62 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.84□□□□□ -1.95
LRRC53A6NM62 SNORA19.2-201ENST00000516013 114 ntBASIC2.84□□□□□ -1.95
LRRC53A6NM62 SNORA31.6-201ENST00000516241 130 ntBASIC2.84□□□□□ -1.95
LRRC53A6NM62 RNU6-1069P-201ENST00000516612 133 ntBASIC2.84□□□□□ -1.95
LRRC53A6NM62 SNORA43.2-201ENST00000516652 128 ntBASIC2.84□□□□□ -1.95
LRRC53A6NM62 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LRRC53A6NM62 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.84□□□□□ -1.95
LRRC53A6NM62 AL133241.1-201ENST00000556832 487 ntBASIC2.84□□□□□ -1.95
LRRC53A6NM62 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.84□□□□□ -1.95
LRRC53A6NM62 MIR3944-201ENST00000581277 108 ntBASIC2.84□□□□□ -1.95
LRRC53A6NM62 MIR5195-201ENST00000583555 115 ntBASIC2.84□□□□□ -1.95
LRRC53A6NM62 RNU6-85P-201ENST00000605989 107 ntBASIC2.84□□□□□ -1.95
LRRC53A6NM62 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
LRRC53A6NM62 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.84□□□□□ -1.96
LRRC53A6NM62 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
LRRC53A6NM62 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.83□□□□□ -1.96
LRRC53A6NM62 AC121333.1-201ENST00000567488 2709 ntBASIC2.83□□□□□ -1.96
LRRC53A6NM62 RNU6-78P-201ENST00000362897 107 ntBASIC2.83□□□□□ -1.96
LRRC53A6NM62 EIF4E2P1-201ENST00000393781 255 ntBASIC2.83□□□□□ -1.96
LRRC53A6NM62 RNA5SP118-201ENST00000410385 109 ntBASIC2.83□□□□□ -1.96
LRRC53A6NM62 SNORD56-201ENST00000413522 71 ntBASIC2.83□□□□□ -1.96
LRRC53A6NM62 AL096701.2-201ENST00000416920 238 ntBASIC2.83□□□□□ -1.96
LRRC53A6NM62 MTND1P23-201ENST00000416931 372 ntBASIC2.83□□□□□ -1.96
LRRC53A6NM62 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.83□□□□□ -1.96
LRRC53A6NM62 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.83□□□□□ -1.96
LRRC53A6NM62 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.83□□□□□ -1.96
LRRC53A6NM62 RNU6-56P-201ENST00000516986 93 ntBASIC2.83□□□□□ -1.96
LRRC53A6NM62 AC069113.1-201ENST00000517763 267 ntBASIC2.83□□□□□ -1.96
LRRC53A6NM62 BTF3P12-201ENST00000519620 469 ntBASIC2.83□□□□□ -1.96
LRRC53A6NM62 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.83□□□□□ -1.96
LRRC53A6NM62 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.83□□□□□ -1.96
LRRC53A6NM62 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.83□□□□□ -1.96
LRRC53A6NM62 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.83□□□□□ -1.96
LRRC53A6NM62 AC009163.5-201ENST00000575421 637 ntBASIC2.83□□□□□ -1.96
LRRC53A6NM62 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.83□□□□□ -1.96
LRRC53A6NM62 MIR5692C1-201ENST00000585309 91 ntBASIC2.83□□□□□ -1.96
LRRC53A6NM62 AL670379.10-201ENST00000604330 253 ntBASIC2.83□□□□□ -1.96
LRRC53A6NM62 AL670379.9-201ENST00000605428 253 ntBASIC2.83□□□□□ -1.96
LRRC53A6NM62 AL357078.3-201ENST00000607528 618 ntBASIC2.83□□□□□ -1.96
LRRC53A6NM62 AC093732.2-201ENST00000607950 274 ntBASIC2.83□□□□□ -1.96
LRRC53A6NM62 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.83□□□□□ -1.96
LRRC53A6NM62 MAPK10-266ENST00000641066 6555 ntBASIC2.83□□□□□ -1.96
LRRC53A6NM62 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.83□□□□□ -1.96
LRRC53A6NM62 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LRRC53A6NM62 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LRRC53A6NM62 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LRRC53A6NM62 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
LRRC53A6NM62 RNU5E-7P-201ENST00000365290 117 ntBASIC2.82□□□□□ -1.96
LRRC53A6NM62 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
LRRC53A6NM62 SNORD116-20-201ENST00000384529 92 ntBASIC2.82□□□□□ -1.96
LRRC53A6NM62 MIR147B-201ENST00000390185 80 ntBASIC2.82□□□□□ -1.96
LRRC53A6NM62 AL133475.1-201ENST00000404414 305 ntBASIC2.82□□□□□ -1.96
LRRC53A6NM62 RNU6-1148P-201ENST00000410992 104 ntBASIC2.82□□□□□ -1.96
LRRC53A6NM62 AL513477.1-202ENST00000417061 214 ntBASIC2.82□□□□□ -1.96
LRRC53A6NM62 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.82□□□□□ -1.96
LRRC53A6NM62 RBMX2P4-201ENST00000441256 376 ntBASIC2.82□□□□□ -1.96
LRRC53A6NM62 AP000705.1-201ENST00000454567 350 ntBASIC2.82□□□□□ -1.96
LRRC53A6NM62 AP001324.2-201ENST00000461163 319 ntBASIC2.82□□□□□ -1.96
LRRC53A6NM62 S100A11P2-201ENST00000467589 312 ntBASIC2.82□□□□□ -1.96
LRRC53A6NM62 MED28P2-201ENST00000475771 317 ntBASIC2.82□□□□□ -1.96
LRRC53A6NM62 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.82□□□□□ -1.96
LRRC53A6NM62 RNU5F-8P-201ENST00000515941 111 ntBASIC2.82□□□□□ -1.96
LRRC53A6NM62 RNU6-358P-201ENST00000516564 75 ntBASIC2.82□□□□□ -1.96
LRRC53A6NM62 RNU6-826P-201ENST00000516827 104 ntBASIC2.82□□□□□ -1.96
LRRC53A6NM62 AC090136.1-201ENST00000520009 240 ntBASIC2.82□□□□□ -1.96
LRRC53A6NM62 RNU6-323P-201ENST00000521915 107 ntBASIC2.82□□□□□ -1.96
LRRC53A6NM62 AF235103.2-201ENST00000525753 346 ntBASIC2.82□□□□□ -1.96
LRRC53A6NM62 AP000763.2-201ENST00000540641 163 ntBASIC2.82□□□□□ -1.96
LRRC53A6NM62 CR383656.8-201ENST00000549046 145 ntBASIC2.82□□□□□ -1.96
LRRC53A6NM62 AC006504.8-201ENST00000621046 635 ntBASIC2.82□□□□□ -1.96
LRRC53A6NM62 MIR7515-201ENST00000637837 67 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 155.9 ms