Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AP001893.2-201ENST00000526949 202 ntBASIC0.08□□□□□ -2.4
GAFA1Q96PS6 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.08□□□□□ -2.4
GAFA1Q96PS6 AP000763.2-201ENST00000540641 163 ntBASIC0.08□□□□□ -2.4
GAFA1Q96PS6 CR383656.8-201ENST00000549046 145 ntBASIC0.08□□□□□ -2.4
GAFA1Q96PS6 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.08□□□□□ -2.4
GAFA1Q96PS6 MIR3664-201ENST00000579074 99 ntBASIC0.08□□□□□ -2.4
GAFA1Q96PS6 AC107075.1-201ENST00000613695 314 ntBASIC0.08□□□□□ -2.4
GAFA1Q96PS6 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.08□□□□□ -2.4
GAFA1Q96PS6 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
GAFA1Q96PS6 RNU4-67P-201ENST00000364569 141 ntBASIC0.07□□□□□ -2.4
GAFA1Q96PS6 RNU4-12P-201ENST00000365233 139 ntBASIC0.07□□□□□ -2.4
GAFA1Q96PS6 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC0.07□□□□□ -2.4
GAFA1Q96PS6 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
GAFA1Q96PS6 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
GAFA1Q96PS6 SNX2P2-201ENST00000424553 323 ntBASIC0.07□□□□□ -2.4
GAFA1Q96PS6 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.07□□□□□ -2.4
GAFA1Q96PS6 TIMM9P1-201ENST00000436122 256 ntBASIC0.07□□□□□ -2.4
GAFA1Q96PS6 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.07□□□□□ -2.4
GAFA1Q96PS6 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.07□□□□□ -2.4
GAFA1Q96PS6 SNORA70.22-201ENST00000517160 124 ntBASIC0.07□□□□□ -2.4
GAFA1Q96PS6 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.07□□□□□ -2.4
GAFA1Q96PS6 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC0.07□□□□□ -2.4
GAFA1Q96PS6 AP003066.2-201ENST00000529375 555 ntBASIC0.07□□□□□ -2.4
GAFA1Q96PS6 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.07□□□□□ -2.4
GAFA1Q96PS6 AL353765.1-201ENST00000605514 183 ntBASIC0.07□□□□□ -2.4
GAFA1Q96PS6 AL031775.1-201ENST00000607014 887 ntBASIC0.07□□□□□ -2.4
GAFA1Q96PS6 AC017083.3-201ENST00000609955 700 ntBASIC0.07□□□□□ -2.4
GAFA1Q96PS6 AC024257.5-201ENST00000612739 531 ntBASIC0.07□□□□□ -2.4
GAFA1Q96PS6 AC130324.3-201ENST00000614165 542 ntBASIC0.07□□□□□ -2.4
GAFA1Q96PS6 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
GAFA1Q96PS6 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
GAFA1Q96PS6 AL391994.1-201ENST00000254724 282 ntBASIC0.06□□□□□ -2.4
GAFA1Q96PS6 SNORA63.3-201ENST00000362682 132 ntBASIC0.06□□□□□ -2.4
GAFA1Q96PS6 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.06□□□□□ -2.4
GAFA1Q96PS6 MIR200A-201ENST00000384875 90 ntBASIC0.06□□□□□ -2.4
GAFA1Q96PS6 MIR613-201ENST00000385248 95 ntBASIC0.06□□□□□ -2.4
GAFA1Q96PS6 AC104651.1-201ENST00000427559 735 ntBASIC0.06□□□□□ -2.4
GAFA1Q96PS6 C8orf59P1-201ENST00000429930 303 ntBASIC0.06□□□□□ -2.4
GAFA1Q96PS6 RPL36AP53-201ENST00000432891 316 ntBASIC0.06□□□□□ -2.4
GAFA1Q96PS6 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.06□□□□□ -2.4
GAFA1Q96PS6 RNA5SP503-201ENST00000517047 117 ntBASIC0.06□□□□□ -2.4
GAFA1Q96PS6 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC0.06□□□□□ -2.4
GAFA1Q96PS6 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.06□□□□□ -2.4
GAFA1Q96PS6 OR6C7P-201ENST00000547875 934 ntBASIC0.06□□□□□ -2.4
GAFA1Q96PS6 AC023932.2-201ENST00000603176 175 ntBASIC0.06□□□□□ -2.4
GAFA1Q96PS6 MIR6718-201ENST00000616153 80 ntBASIC0.06□□□□□ -2.4
GAFA1Q96PS6 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.06□□□□□ -2.4
GAFA1Q96PS6 AC068647.2-201ENST00000637380 353 ntBASIC0.06□□□□□ -2.4
GAFA1Q96PS6 Y_RNA.124-201ENST00000363339 93 ntBASIC0.05□□□□□ -2.4
GAFA1Q96PS6 RNU1-96P-201ENST00000364163 162 ntBASIC0.05□□□□□ -2.4
GAFA1Q96PS6 Y_RNA.255-201ENST00000364581 97 ntBASIC0.05□□□□□ -2.4
GAFA1Q96PS6 MIR193B-201ENST00000384907 83 ntBASIC0.05□□□□□ -2.4
GAFA1Q96PS6 RNU6-360P-201ENST00000390944 104 ntBASIC0.05□□□□□ -2.4
GAFA1Q96PS6 AC119751.3-201ENST00000399720 670 ntBASIC0.05□□□□□ -2.4
GAFA1Q96PS6 RNU2-15P-201ENST00000410692 191 ntBASIC0.05□□□□□ -2.4
GAFA1Q96PS6 MTND2P4-201ENST00000445034 1004 ntBASIC0.05□□□□□ -2.4
GAFA1Q96PS6 MTND1P33-201ENST00000446251 917 ntBASIC0.05□□□□□ -2.4
GAFA1Q96PS6 AC112771.1-201ENST00000463581 102 ntBASIC0.05□□□□□ -2.4
GAFA1Q96PS6 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.05□□□□□ -2.4
GAFA1Q96PS6 HIGD1AP6-201ENST00000521833 279 ntBASIC0.05□□□□□ -2.4
GAFA1Q96PS6 AC092451.2-201ENST00000538746 658 ntBASIC0.05□□□□□ -2.4
GAFA1Q96PS6 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.05□□□□□ -2.4
GAFA1Q96PS6 AC104229.1-201ENST00000561364 255 ntBASIC0.05□□□□□ -2.4
GAFA1Q96PS6 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.05□□□□□ -2.4
GAFA1Q96PS6 AC011374.2-201ENST00000607135 526 ntBASIC0.05□□□□□ -2.4
GAFA1Q96PS6 AC243773.3-201ENST00000613270 256 ntBASIC0.05□□□□□ -2.4
GAFA1Q96PS6 AL158163.2-201ENST00000619110 700 ntBASIC0.05□□□□□ -2.4
GAFA1Q96PS6 AC009509.4-201ENST00000619202 509 ntBASIC0.05□□□□□ -2.4
GAFA1Q96PS6 AP003400.6-201ENST00000624698 740 ntBASIC0.05□□□□□ -2.4
GAFA1Q96PS6 AL512643.1-201ENST00000635735 524 ntBASIC0.05□□□□□ -2.4
GAFA1Q96PS6 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.05□□□□□ -2.4
GAFA1Q96PS6 AC092447.10-201ENST00000620607 1652 ntBASIC0.05□□□□□ -2.4
GAFA1Q96PS6 RNU6-349P-201ENST00000362402 107 ntBASIC0.04□□□□□ -2.4
GAFA1Q96PS6 RNU6-222P-201ENST00000362438 107 ntBASIC0.04□□□□□ -2.4
GAFA1Q96PS6 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.04□□□□□ -2.4
GAFA1Q96PS6 RNA5SP299-201ENST00000391203 116 ntBASIC0.04□□□□□ -2.4
GAFA1Q96PS6 AC063976.4-201ENST00000421971 163 ntBASIC0.04□□□□□ -2.4
GAFA1Q96PS6 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC0.04□□□□□ -2.4
GAFA1Q96PS6 AL589872.1-201ENST00000426602 288 ntBASIC0.04□□□□□ -2.4
GAFA1Q96PS6 AL669831.1-202ENST00000428504 417 ntBASIC0.04□□□□□ -2.4
GAFA1Q96PS6 HSPE1P9-201ENST00000440046 311 ntBASIC0.04□□□□□ -2.4
GAFA1Q96PS6 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
GAFA1Q96PS6 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.04□□□□□ -2.4
GAFA1Q96PS6 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.04□□□□□ -2.4
GAFA1Q96PS6 AC108740.1-201ENST00000498629 225 ntBASIC0.04□□□□□ -2.4
GAFA1Q96PS6 AC105313.1-201ENST00000509121 353 ntBASIC0.04□□□□□ -2.4
GAFA1Q96PS6 RNA5SP255-201ENST00000516370 107 ntBASIC0.04□□□□□ -2.4
GAFA1Q96PS6 AL121579.1-201ENST00000555129 305 ntBASIC0.04□□□□□ -2.4
GAFA1Q96PS6 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.04□□□□□ -2.4
GAFA1Q96PS6 AL355802.4-201ENST00000607635 548 ntBASIC0.04□□□□□ -2.4
GAFA1Q96PS6 AL365434.2-201ENST00000607979 234 ntBASIC0.04□□□□□ -2.4
GAFA1Q96PS6 AC009237.15-201ENST00000610252 501 ntBASIC0.04□□□□□ -2.4
GAFA1Q96PS6 AC011939.3-201ENST00000613686 466 ntBASIC0.04□□□□□ -2.4
GAFA1Q96PS6 MIR7111-201ENST00000619751 72 ntBASIC0.04□□□□□ -2.4
GAFA1Q96PS6 AC091925.1-201ENST00000623204 462 ntBASIC0.04□□□□□ -2.4
GAFA1Q96PS6 AC104820.1-201ENST00000624183 307 ntBASIC0.04□□□□□ -2.4
GAFA1Q96PS6 AC008993.2-201ENST00000631744 806 ntBASIC0.04□□□□□ -2.4
GAFA1Q96PS6 AC017104.5-201ENST00000637647 639 ntBASIC0.04□□□□□ -2.4
GAFA1Q96PS6 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.04□□□□□ -2.4
GAFA1Q96PS6 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 225.1 ms