Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 RNU1-107P-201ENST00000516617 154 ntBASIC3.62□□□□□ -1.83
PNKPQ96T60 AC107934.2-201ENST00000518653 310 ntBASIC3.62□□□□□ -1.83
PNKPQ96T60 AC093331.1-201ENST00000521474 169 ntBASIC3.62□□□□□ -1.83
PNKPQ96T60 AC104576.1-201ENST00000524225 88 ntBASIC3.62□□□□□ -1.83
PNKPQ96T60 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.62□□□□□ -1.83
PNKPQ96T60 AL157871.3-201ENST00000557231 293 ntBASIC3.62□□□□□ -1.83
PNKPQ96T60 AC100830.2-201ENST00000581636 240 ntBASIC3.62□□□□□ -1.83
PNKPQ96T60 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.62□□□□□ -1.83
PNKPQ96T60 AC018462.2-201ENST00000605375 395 ntBASIC3.62□□□□□ -1.83
PNKPQ96T60 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PNKPQ96T60 PISRT1.1-201ENST00000616930 107 ntBASIC3.62□□□□□ -1.83
PNKPQ96T60 AC092608.2-201ENST00000624427 218 ntBASIC3.62□□□□□ -1.83
PNKPQ96T60 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.62□□□□□ -1.83
PNKPQ96T60 MIR3651-201ENST00000630427 90 ntBASIC3.62□□□□□ -1.83
PNKPQ96T60 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PNKPQ96T60 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PNKPQ96T60 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PNKPQ96T60 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PNKPQ96T60 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
PNKPQ96T60 MTND5P27-201ENST00000428871 1720 ntBASIC3.61□□□□□ -1.83
PNKPQ96T60 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.61□□□□□ -1.83
PNKPQ96T60 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.61□□□□□ -1.83
PNKPQ96T60 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.61□□□□□ -1.83
PNKPQ96T60 SNORD62.1-201ENST00000362541 86 ntBASIC3.61□□□□□ -1.83
PNKPQ96T60 SNORD3E-201ENST00000362899 217 ntBASIC3.61□□□□□ -1.83
PNKPQ96T60 SNORA7.2-201ENST00000364446 145 ntBASIC3.61□□□□□ -1.83
PNKPQ96T60 Y_RNA.422-201ENST00000384054 114 ntBASIC3.61□□□□□ -1.83
PNKPQ96T60 SNORD17-201ENST00000390930 237 ntBASIC3.61□□□□□ -1.83
PNKPQ96T60 EI24P2-201ENST00000397776 1076 ntBASIC3.61□□□□□ -1.83
PNKPQ96T60 NDUFB4P7-201ENST00000423198 363 ntBASIC3.61□□□□□ -1.83
PNKPQ96T60 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.61□□□□□ -1.83
PNKPQ96T60 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.61□□□□□ -1.83
PNKPQ96T60 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.61□□□□□ -1.83
PNKPQ96T60 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.61□□□□□ -1.83
PNKPQ96T60 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.61□□□□□ -1.83
PNKPQ96T60 RNU7-187P-201ENST00000458985 68 ntBASIC3.61□□□□□ -1.83
PNKPQ96T60 RPS20P22-201ENST00000473700 357 ntBASIC3.61□□□□□ -1.83
PNKPQ96T60 Y_RNA.708-201ENST00000516950 96 ntBASIC3.61□□□□□ -1.83
PNKPQ96T60 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.61□□□□□ -1.83
PNKPQ96T60 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.61□□□□□ -1.83
PNKPQ96T60 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.61□□□□□ -1.83
PNKPQ96T60 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.61□□□□□ -1.83
PNKPQ96T60 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.61□□□□□ -1.83
PNKPQ96T60 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.61□□□□□ -1.83
PNKPQ96T60 AP001836.1-201ENST00000604675 523 ntBASIC3.61□□□□□ -1.83
PNKPQ96T60 AL355802.3-201ENST00000607571 545 ntBASIC3.61□□□□□ -1.83
PNKPQ96T60 AL161423.1-201ENST00000613700 262 ntBASIC3.61□□□□□ -1.83
PNKPQ96T60 AC133104.2-201ENST00000615272 193 ntBASIC3.61□□□□□ -1.83
PNKPQ96T60 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.61□□□□□ -1.83
PNKPQ96T60 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PNKPQ96T60 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PNKPQ96T60 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PNKPQ96T60 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.6□□□□□ -1.83
PNKPQ96T60 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.6□□□□□ -1.83
PNKPQ96T60 AC032011.1-201ENST00000611703 1549 ntBASIC3.6□□□□□ -1.83
PNKPQ96T60 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
PNKPQ96T60 Y_RNA.324-201ENST00000365165 102 ntBASIC3.6□□□□□ -1.83
PNKPQ96T60 RNU6-890P-201ENST00000384121 107 ntBASIC3.6□□□□□ -1.83
PNKPQ96T60 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PNKPQ96T60 RNU6-1025P-201ENST00000410629 104 ntBASIC3.6□□□□□ -1.83
PNKPQ96T60 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.6□□□□□ -1.83
PNKPQ96T60 RPL21P66-201ENST00000426566 466 ntBASIC3.6□□□□□ -1.83
PNKPQ96T60 AC005326.1-201ENST00000429197 123 ntBASIC3.6□□□□□ -1.83
PNKPQ96T60 ARF4P2-201ENST00000430209 526 ntBASIC3.6□□□□□ -1.83
PNKPQ96T60 USP9YP30-201ENST00000430729 455 ntBASIC3.6□□□□□ -1.83
PNKPQ96T60 AC236972.1-201ENST00000433225 199 ntBASIC3.6□□□□□ -1.83
PNKPQ96T60 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.6□□□□□ -1.83
PNKPQ96T60 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.6□□□□□ -1.83
PNKPQ96T60 AC078918.1-201ENST00000498515 228 ntBASIC3.6□□□□□ -1.83
PNKPQ96T60 RN7SKP57-201ENST00000517248 293 ntBASIC3.6□□□□□ -1.83
PNKPQ96T60 AC069113.1-201ENST00000517763 267 ntBASIC3.6□□□□□ -1.83
PNKPQ96T60 AC022634.1-201ENST00000520765 532 ntBASIC3.6□□□□□ -1.83
PNKPQ96T60 AC245166.1-201ENST00000521012 253 ntBASIC3.6□□□□□ -1.83
PNKPQ96T60 AP003122.3-201ENST00000526316 255 ntBASIC3.6□□□□□ -1.83
PNKPQ96T60 AC084851.1-201ENST00000529105 249 ntBASIC3.6□□□□□ -1.83
PNKPQ96T60 TRAV37-201ENST00000553906 342 ntBASIC3.6□□□□□ -1.83
PNKPQ96T60 AC106900.2-201ENST00000604994 317 ntBASIC3.6□□□□□ -1.83
PNKPQ96T60 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.6□□□□□ -1.83
PNKPQ96T60 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PNKPQ96T60 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
PNKPQ96T60 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
PNKPQ96T60 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.59□□□□□ -1.83
PNKPQ96T60 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
PNKPQ96T60 Y_RNA.33-201ENST00000362591 102 ntBASIC3.59□□□□□ -1.83
PNKPQ96T60 RNU6-1059P-201ENST00000363752 98 ntBASIC3.59□□□□□ -1.83
PNKPQ96T60 Y_RNA.245-201ENST00000364493 95 ntBASIC3.59□□□□□ -1.83
PNKPQ96T60 RNU6-1329P-201ENST00000365664 107 ntBASIC3.59□□□□□ -1.83
PNKPQ96T60 RNU6-1040P-201ENST00000383974 107 ntBASIC3.59□□□□□ -1.83
PNKPQ96T60 RNU6-328P-201ENST00000390887 106 ntBASIC3.59□□□□□ -1.83
PNKPQ96T60 U3.19-201ENST00000390893 196 ntBASIC3.59□□□□□ -1.83
PNKPQ96T60 UBE2D3P2-201ENST00000424409 445 ntBASIC3.59□□□□□ -1.83
PNKPQ96T60 UBE2V1P4-201ENST00000425374 344 ntBASIC3.59□□□□□ -1.83
PNKPQ96T60 AL356867.1-201ENST00000429623 299 ntBASIC3.59□□□□□ -1.83
PNKPQ96T60 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.59□□□□□ -1.83
PNKPQ96T60 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.59□□□□□ -1.83
PNKPQ96T60 FABP5P15-201ENST00000453566 214 ntBASIC3.59□□□□□ -1.83
PNKPQ96T60 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.59□□□□□ -1.83
PNKPQ96T60 AP000873.1-201ENST00000463987 400 ntBASIC3.59□□□□□ -1.83
PNKPQ96T60 AL160314.1-201ENST00000490836 438 ntBASIC3.59□□□□□ -1.83
PNKPQ96T60 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 180.5 ms