Protein–RNA interactions for Protein: Q96MW1

CCDC43, Coiled-coil domain-containing protein 43, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43Q96MW1 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC43Q96MW1 RPL7P43-201ENST00000478876 753 ntBASIC2.49□□□□□ -2.01
CCDC43Q96MW1 AC108078.2-201ENST00000510750 236 ntBASIC2.49□□□□□ -2.01
CCDC43Q96MW1 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC43Q96MW1 RNU6-123P-201ENST00000516163 102 ntBASIC2.49□□□□□ -2.01
CCDC43Q96MW1 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.49□□□□□ -2.01
CCDC43Q96MW1 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.49□□□□□ -2.01
CCDC43Q96MW1 RPL21P5-201ENST00000554662 472 ntBASIC2.49□□□□□ -2.01
CCDC43Q96MW1 AC008015.1-201ENST00000555505 465 ntBASIC2.49□□□□□ -2.01
CCDC43Q96MW1 AL138976.2-201ENST00000563989 694 ntBASIC2.49□□□□□ -2.01
CCDC43Q96MW1 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC43Q96MW1 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
CCDC43Q96MW1 RNU6-91P-201ENST00000607774 107 ntBASIC2.49□□□□□ -2.01
CCDC43Q96MW1 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC43Q96MW1 AC013412.1-201ENST00000610687 192 ntBASIC2.49□□□□□ -2.01
CCDC43Q96MW1 AL161423.1-201ENST00000613700 262 ntBASIC2.49□□□□□ -2.01
CCDC43Q96MW1 AC092656.1-203ENST00000624134 423 ntBASIC2.49□□□□□ -2.01
CCDC43Q96MW1 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC43Q96MW1 AC103710.2-202ENST00000641454 2853 ntBASIC2.48□□□□□ -2.01
CCDC43Q96MW1 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC43Q96MW1 CISD1P1-201ENST00000393907 327 ntBASIC2.48□□□□□ -2.01
CCDC43Q96MW1 SNORA11.2-201ENST00000408318 127 ntBASIC2.48□□□□□ -2.01
CCDC43Q96MW1 SNORA11.4-201ENST00000408823 129 ntBASIC2.48□□□□□ -2.01
CCDC43Q96MW1 Z98742.3-201ENST00000418637 326 ntBASIC2.48□□□□□ -2.01
CCDC43Q96MW1 AL160275.3-201ENST00000423876 471 ntBASIC2.48□□□□□ -2.01
CCDC43Q96MW1 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC43Q96MW1 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC43Q96MW1 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC43Q96MW1 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC43Q96MW1 RPL30P6-201ENST00000475925 342 ntBASIC2.48□□□□□ -2.01
CCDC43Q96MW1 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC43Q96MW1 AC008549.1-201ENST00000512900 643 ntBASIC2.48□□□□□ -2.01
CCDC43Q96MW1 Y_RNA.672-201ENST00000516289 104 ntBASIC2.48□□□□□ -2.01
CCDC43Q96MW1 RNU7-193P-201ENST00000516723 65 ntBASIC2.48□□□□□ -2.01
CCDC43Q96MW1 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC43Q96MW1 AC018638.7-201ENST00000605836 1114 ntBASIC2.48□□□□□ -2.01
CCDC43Q96MW1 AC012409.4-201ENST00000612923 249 ntBASIC2.48□□□□□ -2.01
CCDC43Q96MW1 MIR6895-201ENST00000613497 78 ntBASIC2.48□□□□□ -2.01
CCDC43Q96MW1 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
CCDC43Q96MW1 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC43Q96MW1 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.47□□□□□ -2.01
CCDC43Q96MW1 ZNF658B-202ENST00000615961 3375 ntBASIC2.47□□□□□ -2.01
CCDC43Q96MW1 AC007336.1-201ENST00000576365 3828 ntBASIC2.47□□□□□ -2.01
CCDC43Q96MW1 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC43Q96MW1 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
CCDC43Q96MW1 MIR412-201ENST00000362142 91 ntBASIC2.47□□□□□ -2.01
CCDC43Q96MW1 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CCDC43Q96MW1 OR5H15-201ENST00000383696 930 ntBASIC2.47□□□□□ -2.01
CCDC43Q96MW1 RNU6-641P-201ENST00000384006 107 ntBASIC2.47□□□□□ -2.01
CCDC43Q96MW1 SNORA24.1-201ENST00000384401 135 ntBASIC2.47□□□□□ -2.01
CCDC43Q96MW1 MIR558-201ENST00000384920 94 ntBASIC2.47□□□□□ -2.01
CCDC43Q96MW1 RPL23AP32-201ENST00000395315 459 ntBASIC2.47□□□□□ -2.01
CCDC43Q96MW1 SNORA3.2-201ENST00000408221 125 ntBASIC2.47□□□□□ -2.01
CCDC43Q96MW1 RNU2-39P-201ENST00000410604 198 ntBASIC2.47□□□□□ -2.01
CCDC43Q96MW1 Z99497.1-201ENST00000421282 135 ntBASIC2.47□□□□□ -2.01
CCDC43Q96MW1 WARS2P1-201ENST00000429678 537 ntBASIC2.47□□□□□ -2.01
CCDC43Q96MW1 RPS24P1-201ENST00000438550 371 ntBASIC2.47□□□□□ -2.01
CCDC43Q96MW1 AC117522.2-201ENST00000510049 657 ntBASIC2.47□□□□□ -2.01
CCDC43Q96MW1 AC112206.3-201ENST00000514578 389 ntBASIC2.47□□□□□ -2.01
CCDC43Q96MW1 RNU6-232P-201ENST00000517144 64 ntBASIC2.47□□□□□ -2.01
CCDC43Q96MW1 OR5AQ1P-201ENST00000527596 927 ntBASIC2.47□□□□□ -2.01
CCDC43Q96MW1 MIR548AB-201ENST00000584917 84 ntBASIC2.47□□□□□ -2.01
CCDC43Q96MW1 AC009977.1-201ENST00000586015 570 ntBASIC2.47□□□□□ -2.01
CCDC43Q96MW1 AL139286.2-201ENST00000606838 396 ntBASIC2.47□□□□□ -2.01
CCDC43Q96MW1 U4atac.1-201ENST00000618345 95 ntBASIC2.47□□□□□ -2.01
CCDC43Q96MW1 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC43Q96MW1 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC43Q96MW1 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CCDC43Q96MW1 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC43Q96MW1 MIR144-201ENST00000384886 86 ntBASIC2.46□□□□□ -2.02
CCDC43Q96MW1 SNORD23.1-201ENST00000408212 104 ntBASIC2.46□□□□□ -2.02
CCDC43Q96MW1 Y_RNA.598-201ENST00000410480 95 ntBASIC2.46□□□□□ -2.02
CCDC43Q96MW1 RN7SKP192-201ENST00000411291 327 ntBASIC2.46□□□□□ -2.02
CCDC43Q96MW1 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC43Q96MW1 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC43Q96MW1 MTND4P20-201ENST00000424125 869 ntBASIC2.46□□□□□ -2.02
CCDC43Q96MW1 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC43Q96MW1 TAF9P1-201ENST00000445421 515 ntBASIC2.46□□□□□ -2.02
CCDC43Q96MW1 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC43Q96MW1 TAF9P2-201ENST00000454958 515 ntBASIC2.46□□□□□ -2.02
CCDC43Q96MW1 BZW1P2-201ENST00000473537 826 ntBASIC2.46□□□□□ -2.02
CCDC43Q96MW1 AC117522.1-201ENST00000509821 380 ntBASIC2.46□□□□□ -2.02
CCDC43Q96MW1 RNU6-1220P-201ENST00000517126 108 ntBASIC2.46□□□□□ -2.02
CCDC43Q96MW1 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC43Q96MW1 AC118273.2-201ENST00000532092 465 ntBASIC2.46□□□□□ -2.02
CCDC43Q96MW1 CYCSP26-201ENST00000534107 320 ntBASIC2.46□□□□□ -2.02
CCDC43Q96MW1 SNRPGP18-201ENST00000553000 214 ntBASIC2.46□□□□□ -2.02
CCDC43Q96MW1 AC026464.5-201ENST00000562497 722 ntBASIC2.46□□□□□ -2.02
CCDC43Q96MW1 MIR1273D-201ENST00000577266 86 ntBASIC2.46□□□□□ -2.02
CCDC43Q96MW1 LRRC37A5P-203ENST00000580181 585 ntBASIC2.46□□□□□ -2.02
CCDC43Q96MW1 AC005771.1-201ENST00000585581 349 ntBASIC2.46□□□□□ -2.02
CCDC43Q96MW1 AC012065.4-201ENST00000602445 679 ntBASIC2.46□□□□□ -2.02
CCDC43Q96MW1 AL451064.1-201ENST00000607718 471 ntBASIC2.46□□□□□ -2.02
CCDC43Q96MW1 U6.42-201ENST00000618440 107 ntBASIC2.46□□□□□ -2.02
CCDC43Q96MW1 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.46□□□□□ -2.02
CCDC43Q96MW1 AC079248.2-201ENST00000623779 326 ntBASIC2.46□□□□□ -2.02
CCDC43Q96MW1 AL160394.1-201ENST00000624765 724 ntBASIC2.46□□□□□ -2.02
CCDC43Q96MW1 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC43Q96MW1 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC43Q96MW1 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 198.9 ms