Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 AC006077.1-201ENST00000604746 343 ntBASIC3.93□□□□□ -1.78
NPHS1O60500 AL591424.2-201ENST00000617023 128 ntBASIC3.93□□□□□ -1.78
NPHS1O60500 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.93□□□□□ -1.78
NPHS1O60500 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.93□□□□□ -1.78
NPHS1O60500 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.93□□□□□ -1.78
NPHS1O60500 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.93□□□□□ -1.78
NPHS1O60500 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NPHS1O60500 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
NPHS1O60500 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.92□□□□□ -1.78
NPHS1O60500 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPHS1O60500 RLIMP1-201ENST00000339626 1680 ntBASIC3.92□□□□□ -1.78
NPHS1O60500 FTLP6-201ENST00000355274 422 ntBASIC3.92□□□□□ -1.78
NPHS1O60500 Y_RNA.14-201ENST00000362415 103 ntBASIC3.92□□□□□ -1.78
NPHS1O60500 RNU6-398P-201ENST00000384143 109 ntBASIC3.92□□□□□ -1.78
NPHS1O60500 HMGN2P8-201ENST00000391458 268 ntBASIC3.92□□□□□ -1.78
NPHS1O60500 SNORA11B-201ENST00000408175 129 ntBASIC3.92□□□□□ -1.78
NPHS1O60500 HMGB1P37-201ENST00000439613 609 ntBASIC3.92□□□□□ -1.78
NPHS1O60500 RPEP5-201ENST00000441137 268 ntBASIC3.92□□□□□ -1.78
NPHS1O60500 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.92□□□□□ -1.78
NPHS1O60500 LINC01399-202ENST00000458450 244 ntBASIC3.92□□□□□ -1.78
NPHS1O60500 RPL31P13-201ENST00000484151 370 ntBASIC3.92□□□□□ -1.78
NPHS1O60500 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.92□□□□□ -1.78
NPHS1O60500 AC074250.1-201ENST00000511117 192 ntBASIC3.92□□□□□ -1.78
NPHS1O60500 RNU6-570P-201ENST00000517051 105 ntBASIC3.92□□□□□ -1.78
NPHS1O60500 AC034114.1-201ENST00000520293 285 ntBASIC3.92□□□□□ -1.78
NPHS1O60500 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.92□□□□□ -1.78
NPHS1O60500 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.92□□□□□ -1.78
NPHS1O60500 CYCSP39-201ENST00000565821 309 ntBASIC3.92□□□□□ -1.78
NPHS1O60500 MIR3128-201ENST00000581957 66 ntBASIC3.92□□□□□ -1.78
NPHS1O60500 MIR4715-201ENST00000584117 79 ntBASIC3.92□□□□□ -1.78
NPHS1O60500 AC096772.1-201ENST00000609146 564 ntBASIC3.92□□□□□ -1.78
NPHS1O60500 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NPHS1O60500 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NPHS1O60500 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPHS1O60500 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.92□□□□□ -1.78
NPHS1O60500 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NPHS1O60500 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPHS1O60500 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.91□□□□□ -1.78
NPHS1O60500 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.91□□□□□ -1.78
NPHS1O60500 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
NPHS1O60500 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.91□□□□□ -1.78
NPHS1O60500 RNA5SP447-201ENST00000363749 119 ntBASIC3.91□□□□□ -1.78
NPHS1O60500 RNA5SP505-201ENST00000364748 108 ntBASIC3.91□□□□□ -1.78
NPHS1O60500 Y_RNA.405-201ENST00000383979 100 ntBASIC3.91□□□□□ -1.78
NPHS1O60500 Y_RNA.451-201ENST00000384200 100 ntBASIC3.91□□□□□ -1.78
NPHS1O60500 Y_RNA.524-201ENST00000384564 100 ntBASIC3.91□□□□□ -1.78
NPHS1O60500 Y_RNA.552-201ENST00000384665 112 ntBASIC3.91□□□□□ -1.78
NPHS1O60500 Y_RNA.561-201ENST00000384694 100 ntBASIC3.91□□□□□ -1.78
NPHS1O60500 SNORA12.2-201ENST00000391040 156 ntBASIC3.91□□□□□ -1.78
NPHS1O60500 RNU6-1197P-201ENST00000391183 107 ntBASIC3.91□□□□□ -1.78
NPHS1O60500 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.91□□□□□ -1.78
NPHS1O60500 RNA5SP31-201ENST00000411144 127 ntBASIC3.91□□□□□ -1.78
NPHS1O60500 ELOCP19-201ENST00000411919 318 ntBASIC3.91□□□□□ -1.78
NPHS1O60500 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.91□□□□□ -1.78
NPHS1O60500 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NPHS1O60500 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.91□□□□□ -1.78
NPHS1O60500 AC083863.1-201ENST00000438811 231 ntBASIC3.91□□□□□ -1.78
NPHS1O60500 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NPHS1O60500 RN7SKP210-201ENST00000459176 261 ntBASIC3.91□□□□□ -1.78
NPHS1O60500 RN7SL93P-201ENST00000463035 293 ntBASIC3.91□□□□□ -1.78
NPHS1O60500 AC034236.1-201ENST00000469891 373 ntBASIC3.91□□□□□ -1.78
NPHS1O60500 AC010265.1-201ENST00000513509 211 ntBASIC3.91□□□□□ -1.78
NPHS1O60500 RNU6-703P-201ENST00000516946 107 ntBASIC3.91□□□□□ -1.78
NPHS1O60500 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.91□□□□□ -1.78
NPHS1O60500 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.91□□□□□ -1.78
NPHS1O60500 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.91□□□□□ -1.78
NPHS1O60500 MIR4782-201ENST00000577987 79 ntBASIC3.91□□□□□ -1.78
NPHS1O60500 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.91□□□□□ -1.78
NPHS1O60500 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.91□□□□□ -1.78
NPHS1O60500 AC027309.3-201ENST00000623419 351 ntBASIC3.91□□□□□ -1.78
NPHS1O60500 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NPHS1O60500 Z75746.1-201ENST00000440243 2080 ntBASIC3.91□□□□□ -1.78
NPHS1O60500 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.91□□□□□ -1.78
NPHS1O60500 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.9□□□□□ -1.78
NPHS1O60500 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NPHS1O60500 Y_RNA.60-201ENST00000362831 98 ntBASIC3.9□□□□□ -1.79
NPHS1O60500 Z98749.2-208ENST00000381646 500 ntBASIC3.9□□□□□ -1.79
NPHS1O60500 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
NPHS1O60500 RNU6-611P-201ENST00000384276 104 ntBASIC3.9□□□□□ -1.79
NPHS1O60500 Y_RNA.477-201ENST00000384352 108 ntBASIC3.9□□□□□ -1.79
NPHS1O60500 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NPHS1O60500 MIR190B-201ENST00000401119 79 ntBASIC3.9□□□□□ -1.79
NPHS1O60500 RNU6-121P-201ENST00000410525 99 ntBASIC3.9□□□□□ -1.79
NPHS1O60500 RAC1P3-201ENST00000416129 580 ntBASIC3.9□□□□□ -1.79
NPHS1O60500 RPL21P38-201ENST00000418090 167 ntBASIC3.9□□□□□ -1.79
NPHS1O60500 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.9□□□□□ -1.79
NPHS1O60500 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.9□□□□□ -1.79
NPHS1O60500 snoU13.1-201ENST00000459157 104 ntBASIC3.9□□□□□ -1.79
NPHS1O60500 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.9□□□□□ -1.79
NPHS1O60500 RN7SL604P-201ENST00000492589 296 ntBASIC3.9□□□□□ -1.79
NPHS1O60500 AC020593.1-201ENST00000507399 299 ntBASIC3.9□□□□□ -1.79
NPHS1O60500 SNORA31.18-201ENST00000517043 134 ntBASIC3.9□□□□□ -1.79
NPHS1O60500 AP003733.2-201ENST00000529409 171 ntBASIC3.9□□□□□ -1.79
NPHS1O60500 HSPE1P5-201ENST00000561489 272 ntBASIC3.9□□□□□ -1.79
NPHS1O60500 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.9□□□□□ -1.79
NPHS1O60500 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.9□□□□□ -1.79
NPHS1O60500 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NPHS1O60500 SCARNA4-202ENST00000625402 129 ntBASIC3.9□□□□□ -1.79
NPHS1O60500 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.9□□□□□ -1.79
NPHS1O60500 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 286 ms