Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KRT40Q6A162 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
KRT40Q6A162 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
KRT40Q6A162 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KRT40Q6A162 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KRT40Q6A162 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KRT40Q6A162 AC138393.1-203ENST00000327086 343 ntBASIC3.94□□□□□ -1.78
KRT40Q6A162 RNU6-266P-201ENST00000364225 107 ntBASIC3.94□□□□□ -1.78
KRT40Q6A162 RNU6-1105P-201ENST00000384774 107 ntBASIC3.94□□□□□ -1.78
KRT40Q6A162 MIR578-201ENST00000384828 96 ntBASIC3.94□□□□□ -1.78
KRT40Q6A162 UBA52P6-201ENST00000399822 382 ntBASIC3.94□□□□□ -1.78
KRT40Q6A162 AL356057.3-201ENST00000402607 340 ntBASIC3.94□□□□□ -1.78
KRT40Q6A162 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
KRT40Q6A162 RNU6-55P-201ENST00000411092 107 ntBASIC3.94□□□□□ -1.78
KRT40Q6A162 AC080125.1-201ENST00000414888 684 ntBASIC3.94□□□□□ -1.78
KRT40Q6A162 TOMM22P1-201ENST00000418578 312 ntBASIC3.94□□□□□ -1.78
KRT40Q6A162 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.94□□□□□ -1.78
KRT40Q6A162 AL121871.1-201ENST00000443413 436 ntBASIC3.94□□□□□ -1.78
KRT40Q6A162 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.94□□□□□ -1.78
KRT40Q6A162 RNU6-953P-201ENST00000459154 107 ntBASIC3.94□□□□□ -1.78
KRT40Q6A162 AC021205.2-201ENST00000480069 347 ntBASIC3.94□□□□□ -1.78
KRT40Q6A162 RPL7P42-201ENST00000481005 679 ntBASIC3.94□□□□□ -1.78
KRT40Q6A162 SUMO2P6-201ENST00000505273 288 ntBASIC3.94□□□□□ -1.78
KRT40Q6A162 AC097473.1-201ENST00000508142 408 ntBASIC3.94□□□□□ -1.78
KRT40Q6A162 CYCSP27-201ENST00000527643 293 ntBASIC3.94□□□□□ -1.78
KRT40Q6A162 AC011602.1-201ENST00000546484 331 ntBASIC3.94□□□□□ -1.78
KRT40Q6A162 AC025423.5-201ENST00000550230 219 ntBASIC3.94□□□□□ -1.78
KRT40Q6A162 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
KRT40Q6A162 MIR3671-201ENST00000580455 88 ntBASIC3.94□□□□□ -1.78
KRT40Q6A162 AC018462.2-201ENST00000605375 395 ntBASIC3.94□□□□□ -1.78
KRT40Q6A162 AC009229.3-201ENST00000608056 282 ntBASIC3.94□□□□□ -1.78
KRT40Q6A162 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.94□□□□□ -1.78
KRT40Q6A162 U7.8-201ENST00000619968 63 ntBASIC3.94□□□□□ -1.78
KRT40Q6A162 MTND5P16-201ENST00000460269 1703 ntBASIC3.94□□□□□ -1.78
KRT40Q6A162 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.94□□□□□ -1.78
KRT40Q6A162 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
KRT40Q6A162 AL353743.1-202ENST00000431724 1695 ntBASIC3.94□□□□□ -1.78
KRT40Q6A162 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
KRT40Q6A162 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.93□□□□□ -1.78
KRT40Q6A162 AC233263.6-201ENST00000631132 1963 ntBASIC3.93□□□□□ -1.78
KRT40Q6A162 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.93□□□□□ -1.78
KRT40Q6A162 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.93□□□□□ -1.78
KRT40Q6A162 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
KRT40Q6A162 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.93□□□□□ -1.78
KRT40Q6A162 SNORD3E-201ENST00000362899 217 ntBASIC3.93□□□□□ -1.78
KRT40Q6A162 RNA5SP374-201ENST00000362939 125 ntBASIC3.93□□□□□ -1.78
KRT40Q6A162 RNA5SP197-201ENST00000363357 119 ntBASIC3.93□□□□□ -1.78
KRT40Q6A162 SNORA75B-201ENST00000384053 137 ntBASIC3.93□□□□□ -1.78
KRT40Q6A162 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
KRT40Q6A162 Y_RNA.594-201ENST00000410373 140 ntBASIC3.93□□□□□ -1.78
KRT40Q6A162 AC244098.2-201ENST00000422068 99 ntBASIC3.93□□□□□ -1.78
KRT40Q6A162 TXNP1-201ENST00000441872 371 ntBASIC3.93□□□□□ -1.78
KRT40Q6A162 AL035666.1-201ENST00000446195 348 ntBASIC3.93□□□□□ -1.78
KRT40Q6A162 MTND5P22-201ENST00000458380 195 ntBASIC3.93□□□□□ -1.78
KRT40Q6A162 RN7SL429P-201ENST00000479090 223 ntBASIC3.93□□□□□ -1.78
KRT40Q6A162 HSPE1P6-201ENST00000479457 291 ntBASIC3.93□□□□□ -1.78
KRT40Q6A162 RN7SL489P-201ENST00000486185 223 ntBASIC3.93□□□□□ -1.78
KRT40Q6A162 RN7SL327P-201ENST00000488659 223 ntBASIC3.93□□□□□ -1.78
KRT40Q6A162 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.93□□□□□ -1.78
KRT40Q6A162 RNU6-976P-201ENST00000516086 111 ntBASIC3.93□□□□□ -1.78
KRT40Q6A162 Y_RNA.720-201ENST00000517166 92 ntBASIC3.93□□□□□ -1.78
KRT40Q6A162 IGKV2-26-201ENST00000518305 343 ntBASIC3.93□□□□□ -1.78
KRT40Q6A162 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.93□□□□□ -1.78
KRT40Q6A162 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.93□□□□□ -1.78
KRT40Q6A162 BDH2P1-201ENST00000602288 736 ntBASIC3.93□□□□□ -1.78
KRT40Q6A162 RN7SL853P-201ENST00000617250 223 ntBASIC3.93□□□□□ -1.78
KRT40Q6A162 AC092608.2-201ENST00000624427 218 ntBASIC3.93□□□□□ -1.78
KRT40Q6A162 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
KRT40Q6A162 AL356274.2-201ENST00000624379 3752 ntBASIC3.93□□□□□ -1.78
KRT40Q6A162 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
KRT40Q6A162 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
KRT40Q6A162 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
KRT40Q6A162 Y_RNA.463-201ENST00000384271 102 ntBASIC3.92□□□□□ -1.78
KRT40Q6A162 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
KRT40Q6A162 RPL21P90-201ENST00000415692 466 ntBASIC3.92□□□□□ -1.78
KRT40Q6A162 MCFD2P1-201ENST00000417812 300 ntBASIC3.92□□□□□ -1.78
KRT40Q6A162 RPL23AP82-202ENST00000427528 469 ntBASIC3.92□□□□□ -1.78
KRT40Q6A162 AL160004.2-201ENST00000432935 350 ntBASIC3.92□□□□□ -1.78
KRT40Q6A162 AL359672.1-201ENST00000442302 409 ntBASIC3.92□□□□□ -1.78
KRT40Q6A162 CENPBD1P1-201ENST00000464061 469 ntBASIC3.92□□□□□ -1.78
KRT40Q6A162 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.92□□□□□ -1.78
KRT40Q6A162 RN7SL504P-201ENST00000494496 287 ntBASIC3.92□□□□□ -1.78
KRT40Q6A162 HMGB1P22-201ENST00000505315 124 ntBASIC3.92□□□□□ -1.78
KRT40Q6A162 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.92□□□□□ -1.78
KRT40Q6A162 MTND3P25-201ENST00000509243 135 ntBASIC3.92□□□□□ -1.78
KRT40Q6A162 RNA5SP471-201ENST00000516971 106 ntBASIC3.92□□□□□ -1.78
KRT40Q6A162 RNU6-988P-201ENST00000519081 107 ntBASIC3.92□□□□□ -1.78
KRT40Q6A162 SNRPGP16-201ENST00000533275 226 ntBASIC3.92□□□□□ -1.78
KRT40Q6A162 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.92□□□□□ -1.78
KRT40Q6A162 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.92□□□□□ -1.78
KRT40Q6A162 MIR4680-201ENST00000580906 66 ntBASIC3.92□□□□□ -1.78
KRT40Q6A162 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
KRT40Q6A162 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.92□□□□□ -1.78
KRT40Q6A162 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
KRT40Q6A162 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
KRT40Q6A162 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.92□□□□□ -1.78
KRT40Q6A162 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.91□□□□□ -1.78
KRT40Q6A162 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
KRT40Q6A162 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.91□□□□□ -1.78
KRT40Q6A162 RNU6-574P-201ENST00000384265 107 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 193.7 ms