Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 OR56A5-201ENST00000340110 738 ntBASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 RNU6-874P-201ENST00000362390 105 ntBASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 RNU6-858P-201ENST00000362436 107 ntBASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 RNU6-1280P-201ENST00000365211 107 ntBASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 RNU6-142P-201ENST00000384019 107 ntBASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 RNU6-968P-201ENST00000384076 107 ntBASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 SNORD116-20-201ENST00000384529 92 ntBASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 AL591034.1-201ENST00000407447 340 ntBASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 DYNLT3P2-201ENST00000442517 295 ntBASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 BTF3P6-201ENST00000448054 499 ntBASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 HMGN2P16-201ENST00000456802 261 ntBASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 BX510359.1-201ENST00000456973 237 ntBASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 RPS29P19-201ENST00000479709 171 ntBASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 AC006445.2-201ENST00000510061 472 ntBASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 FTH1P9-201ENST00000513251 355 ntBASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 Y_RNA.713-201ENST00000517013 96 ntBASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 RNU6-794P-201ENST00000517261 64 ntBASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 HIGD1AP1-201ENST00000550979 275 ntBASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 LINC00901.1-201ENST00000617252 152 ntBASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.86□□□□□ -1.63
TMEM88BA6NKF7 AC007496.3-201ENST00000624987 3443 ntBASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 ADAM3A-203ENST00000461344 2157 ntBASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 Y_RNA.288-201ENST00000364854 92 ntBASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 TBCAP1-201ENST00000436520 327 ntBASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 CYCSP35-201ENST00000451978 304 ntBASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 PCNPP5-201ENST00000452246 481 ntBASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 RNU7-87P-201ENST00000459343 62 ntBASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 RPS26P21-201ENST00000475397 348 ntBASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 SNORA25.11-201ENST00000515935 105 ntBASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 IGHV3-76-201ENST00000522465 295 ntBASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 CR383656.8-201ENST00000549046 145 ntBASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 MIR3922-201ENST00000585192 84 ntBASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 AC020895.1-201ENST00000595362 272 ntBASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 AC002076.2-201ENST00000617362 122 ntBASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 MIR8062-201ENST00000621515 85 ntBASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 AC241585.2-209ENST00000638217 143 ntBASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.85□□□□□ -1.63
TMEM88BA6NKF7 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 Z75746.1-201ENST00000440243 2080 ntBASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 RNU1-100P-201ENST00000365255 165 ntBASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 Y_RNA.405-201ENST00000383979 100 ntBASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 Y_RNA.451-201ENST00000384200 100 ntBASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 Y_RNA.524-201ENST00000384564 100 ntBASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 Y_RNA.561-201ENST00000384694 100 ntBASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 MIR1302-6-201ENST00000408466 90 ntBASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 RBMY1KP-201ENST00000423480 476 ntBASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 RPL23AP25-201ENST00000430973 463 ntBASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 AC106707.2-201ENST00000484182 374 ntBASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 RN7SL283P-201ENST00000489055 303 ntBASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 RNA5SP249-201ENST00000516127 99 ntBASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 AC019159.1-201ENST00000605094 187 ntBASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 AC062037.2-201ENST00000610137 73 ntBASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
TMEM88BA6NKF7 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 178.6 ms