Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
TMEM88BA6NKF7 MIR3651-201ENST00000630427 90 ntBASIC4.9□□□□□ -1.63
TMEM88BA6NKF7 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.9□□□□□ -1.63
TMEM88BA6NKF7 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.9□□□□□ -1.63
TMEM88BA6NKF7 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
TMEM88BA6NKF7 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
TMEM88BA6NKF7 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 HSPE1P26-201ENST00000405341 275 ntBASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 Y_RNA.592-201ENST00000410274 109 ntBASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 RNU2-37P-201ENST00000410695 177 ntBASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 RNU6-847P-201ENST00000411115 108 ntBASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 AC007738.1-201ENST00000413892 348 ntBASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 USP9YP16-201ENST00000430287 407 ntBASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 CHEK2P4-201ENST00000450340 246 ntBASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 USP9YP23-201ENST00000455085 407 ntBASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 RNA5SP310-201ENST00000459084 116 ntBASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 RPL23AP14-201ENST00000468281 468 ntBASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 RNY3P15-201ENST00000516297 97 ntBASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 RNU6-1271P-201ENST00000517049 105 ntBASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 AC015912.2-201ENST00000571053 181 ntBASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 AC107068.1-201ENST00000563286 4218 ntBASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 AC233981.2-201ENST00000611524 1614 ntBASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.89□□□□□ -1.63
TMEM88BA6NKF7 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 ZNF72P-201ENST00000425869 1908 ntBASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 RNY3P11-201ENST00000364153 102 ntBASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 RNU4-9P-201ENST00000364951 139 ntBASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 MIR518D-201ENST00000385014 87 ntBASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 RPS4XP3-201ENST00000398541 413 ntBASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 MIR190B-201ENST00000401119 79 ntBASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 CKS1BP6-201ENST00000424932 240 ntBASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 CBX3P6-201ENST00000430257 527 ntBASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 RPS6P12-201ENST00000432491 726 ntBASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 AC098831.1-201ENST00000440661 216 ntBASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 MIR3609-201ENST00000582661 80 ntBASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 RPL23AP78-201ENST00000599928 470 ntBASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 MTND4LP5-201ENST00000605152 292 ntBASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 AC008079.2-201ENST00000623543 20396 ntBASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TMEM88BA6NKF7 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.87□□□□□ -1.63
TMEM88BA6NKF7 PCAT14-202ENST00000627127 3935 ntBASIC4.87□□□□□ -1.63
TMEM88BA6NKF7 AC126323.6-202ENST00000568092 3511 ntBASIC4.87□□□□□ -1.63
TMEM88BA6NKF7 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
TMEM88BA6NKF7 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TMEM88BA6NKF7 RNU1-76P-201ENST00000362903 159 ntBASIC4.87□□□□□ -1.63
TMEM88BA6NKF7 Z98749.2-208ENST00000381646 500 ntBASIC4.87□□□□□ -1.63
TMEM88BA6NKF7 RNU1-63P-201ENST00000383902 164 ntBASIC4.87□□□□□ -1.63
TMEM88BA6NKF7 SNORA48.2-201ENST00000390926 124 ntBASIC4.87□□□□□ -1.63
TMEM88BA6NKF7 SNORA12.2-201ENST00000391040 156 ntBASIC4.87□□□□□ -1.63
TMEM88BA6NKF7 AL356968.1-201ENST00000416622 474 ntBASIC4.87□□□□□ -1.63
TMEM88BA6NKF7 VTI1BP4-201ENST00000427516 527 ntBASIC4.87□□□□□ -1.63
TMEM88BA6NKF7 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.87□□□□□ -1.63
TMEM88BA6NKF7 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.87□□□□□ -1.63
TMEM88BA6NKF7 AP001486.1-201ENST00000463339 476 ntBASIC4.87□□□□□ -1.63
TMEM88BA6NKF7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.87□□□□□ -1.63
TMEM88BA6NKF7 RN7SKP57-201ENST00000517248 293 ntBASIC4.87□□□□□ -1.63
TMEM88BA6NKF7 AC022882.1-201ENST00000532142 501 ntBASIC4.87□□□□□ -1.63
TMEM88BA6NKF7 AC091178.1-203ENST00000584586 279 ntBASIC4.87□□□□□ -1.63
TMEM88BA6NKF7 MIR6076-201ENST00000617521 113 ntBASIC4.87□□□□□ -1.63
TMEM88BA6NKF7 AL159153.1-201ENST00000619688 317 ntBASIC4.87□□□□□ -1.63
TMEM88BA6NKF7 MIR6852-201ENST00000621699 66 ntBASIC4.87□□□□□ -1.63
TMEM88BA6NKF7 AC007656.2-201ENST00000624902 4547 ntBASIC4.87□□□□□ -1.63
TMEM88BA6NKF7 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
TMEM88BA6NKF7 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
TMEM88BA6NKF7 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TMEM88BA6NKF7 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 164 ms