Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.17□□□□□ -1.74
EPHB3P54753 AL031601.2-202ENST00000622650 282 ntBASIC4.17□□□□□ -1.74
EPHB3P54753 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.17□□□□□ -1.74
EPHB3P54753 FP236240.3-201ENST00000623061 327 ntBASIC4.17□□□□□ -1.74
EPHB3P54753 AC018529.3-201ENST00000624212 2254 ntBASIC4.17□□□□□ -1.74
EPHB3P54753 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
EPHB3P54753 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.17□□□□□ -1.74
EPHB3P54753 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
EPHB3P54753 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
EPHB3P54753 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
EPHB3P54753 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.17□□□□□ -1.74
EPHB3P54753 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
EPHB3P54753 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.17□□□□□ -1.74
EPHB3P54753 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.17□□□□□ -1.74
EPHB3P54753 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.16□□□□□ -1.74
EPHB3P54753 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.16□□□□□ -1.74
EPHB3P54753 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
EPHB3P54753 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
EPHB3P54753 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
EPHB3P54753 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
EPHB3P54753 Y_RNA.84-201ENST00000363011 104 ntBASIC4.16□□□□□ -1.74
EPHB3P54753 RNU6-774P-201ENST00000363238 107 ntBASIC4.16□□□□□ -1.74
EPHB3P54753 RNA5SP399-201ENST00000364003 117 ntBASIC4.16□□□□□ -1.74
EPHB3P54753 Y_RNA.297-201ENST00000364950 91 ntBASIC4.16□□□□□ -1.74
EPHB3P54753 U3.15-201ENST00000365398 212 ntBASIC4.16□□□□□ -1.74
EPHB3P54753 Y_RNA.464-201ENST00000384282 110 ntBASIC4.16□□□□□ -1.74
EPHB3P54753 RNA5SP171-201ENST00000391071 115 ntBASIC4.16□□□□□ -1.74
EPHB3P54753 MIR1250-201ENST00000408098 113 ntBASIC4.16□□□□□ -1.74
EPHB3P54753 RNU6-130P-201ENST00000411112 103 ntBASIC4.16□□□□□ -1.74
EPHB3P54753 RPL7AP73-201ENST00000413490 353 ntBASIC4.16□□□□□ -1.74
EPHB3P54753 AC092447.6-201ENST00000414578 210 ntBASIC4.16□□□□□ -1.74
EPHB3P54753 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.16□□□□□ -1.74
EPHB3P54753 RPL21P90-201ENST00000415692 466 ntBASIC4.16□□□□□ -1.74
EPHB3P54753 EIF4EP2-201ENST00000422816 654 ntBASIC4.16□□□□□ -1.74
EPHB3P54753 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.16□□□□□ -1.74
EPHB3P54753 AL360271.2-201ENST00000447710 161 ntBASIC4.16□□□□□ -1.74
EPHB3P54753 AL500522.2-201ENST00000448562 343 ntBASIC4.16□□□□□ -1.74
EPHB3P54753 AL139109.1-201ENST00000455491 297 ntBASIC4.16□□□□□ -1.74
EPHB3P54753 AC006517.1-201ENST00000480485 328 ntBASIC4.16□□□□□ -1.74
EPHB3P54753 AC113155.1-201ENST00000511141 769 ntBASIC4.16□□□□□ -1.74
EPHB3P54753 RNU4-71P-201ENST00000516258 113 ntBASIC4.16□□□□□ -1.74
EPHB3P54753 RNU4-60P-201ENST00000517239 135 ntBASIC4.16□□□□□ -1.74
EPHB3P54753 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.16□□□□□ -1.74
EPHB3P54753 OR1M4P-201ENST00000589199 287 ntBASIC4.16□□□□□ -1.74
EPHB3P54753 AL355877.2-201ENST00000603670 358 ntBASIC4.16□□□□□ -1.74
EPHB3P54753 AC010900.2-201ENST00000604508 210 ntBASIC4.16□□□□□ -1.74
EPHB3P54753 MIR15A-201ENST00000607334 83 ntBASIC4.16□□□□□ -1.74
EPHB3P54753 MIR1244-1-201ENST00000612829 85 ntBASIC4.16□□□□□ -1.74
EPHB3P54753 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.16□□□□□ -1.74
EPHB3P54753 AC039056.2-201ENST00000622261 511 ntBASIC4.16□□□□□ -1.74
EPHB3P54753 MIR1244-3-201ENST00000635744 85 ntBASIC4.16□□□□□ -1.74
EPHB3P54753 MIR1244-2-201ENST00000636449 85 ntBASIC4.16□□□□□ -1.74
EPHB3P54753 MIR1244-4-202ENST00000636813 85 ntBASIC4.16□□□□□ -1.74
EPHB3P54753 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
EPHB3P54753 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
EPHB3P54753 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.16□□□□□ -1.74
EPHB3P54753 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
EPHB3P54753 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.16□□□□□ -1.74
EPHB3P54753 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
EPHB3P54753 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
EPHB3P54753 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.15□□□□□ -1.74
EPHB3P54753 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
EPHB3P54753 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
EPHB3P54753 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
EPHB3P54753 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
EPHB3P54753 MARK2P15-201ENST00000432204 2186 ntBASIC4.15□□□□□ -1.75
EPHB3P54753 MIR135A2-201ENST00000384854 100 ntBASIC4.15□□□□□ -1.75
EPHB3P54753 MT-TC-201ENST00000387405 66 ntBASIC4.15□□□□□ -1.75
EPHB3P54753 AL591034.2-201ENST00000402839 359 ntBASIC4.15□□□□□ -1.75
EPHB3P54753 RNU2-33P-201ENST00000410344 192 ntBASIC4.15□□□□□ -1.75
EPHB3P54753 RNU6-325P-201ENST00000411132 105 ntBASIC4.15□□□□□ -1.75
EPHB3P54753 RNU6-607P-201ENST00000411283 108 ntBASIC4.15□□□□□ -1.75
EPHB3P54753 GOT2P5-201ENST00000433995 546 ntBASIC4.15□□□□□ -1.75
EPHB3P54753 CKS1BP5-201ENST00000434172 273 ntBASIC4.15□□□□□ -1.75
EPHB3P54753 RN7SL585P-201ENST00000470538 280 ntBASIC4.15□□□□□ -1.75
EPHB3P54753 IGLV3-26-201ENST00000520756 302 ntBASIC4.15□□□□□ -1.75
EPHB3P54753 YPEL5P3-201ENST00000547227 352 ntBASIC4.15□□□□□ -1.75
EPHB3P54753 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.15□□□□□ -1.75
EPHB3P54753 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.15□□□□□ -1.75
EPHB3P54753 MIR5701-3-201ENST00000578890 82 ntBASIC4.15□□□□□ -1.75
EPHB3P54753 CPDP1-201ENST00000579660 283 ntBASIC4.15□□□□□ -1.75
EPHB3P54753 MIR4444-1-201ENST00000581696 74 ntBASIC4.15□□□□□ -1.75
EPHB3P54753 MIR4444-2-201ENST00000584390 74 ntBASIC4.15□□□□□ -1.75
EPHB3P54753 MIR5701-1-201ENST00000585138 82 ntBASIC4.15□□□□□ -1.75
EPHB3P54753 AL158827.2-201ENST00000602494 330 ntBASIC4.15□□□□□ -1.75
EPHB3P54753 MIR5701-2-201ENST00000615634 82 ntBASIC4.15□□□□□ -1.75
EPHB3P54753 MIR6075-201ENST00000620782 95 ntBASIC4.15□□□□□ -1.75
EPHB3P54753 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.15□□□□□ -1.75
EPHB3P54753 AC112200.1-201ENST00000625015 234 ntBASIC4.15□□□□□ -1.75
EPHB3P54753 AL691447.3-201ENST00000635020 330 ntBASIC4.15□□□□□ -1.75
EPHB3P54753 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
EPHB3P54753 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.15□□□□□ -1.75
EPHB3P54753 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.15□□□□□ -1.75
EPHB3P54753 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
EPHB3P54753 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
EPHB3P54753 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
EPHB3P54753 RNU1-76P-201ENST00000362903 159 ntBASIC4.14□□□□□ -1.75
EPHB3P54753 Y_RNA.352-201ENST00000365439 102 ntBASIC4.14□□□□□ -1.75
EPHB3P54753 U3.42-201ENST00000408746 214 ntBASIC4.14□□□□□ -1.75
EPHB3P54753 RPS15AP6-201ENST00000420703 385 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 242.3 ms