Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 Y_RNA.288-201ENST00000364854 92 ntBASIC4□□□□□ -1.77
NPHS1O60500 Y_RNA.447-201ENST00000384184 113 ntBASIC4□□□□□ -1.77
NPHS1O60500 RNU1-89P-201ENST00000384592 164 ntBASIC4□□□□□ -1.77
NPHS1O60500 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4□□□□□ -1.77
NPHS1O60500 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NPHS1O60500 RNA5SP494-201ENST00000410653 129 ntBASIC4□□□□□ -1.77
NPHS1O60500 AL590139.1-201ENST00000416267 400 ntBASIC4□□□□□ -1.77
NPHS1O60500 AC007098.1-201ENST00000420122 367 ntBASIC4□□□□□ -1.77
NPHS1O60500 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4□□□□□ -1.77
NPHS1O60500 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4□□□□□ -1.77
NPHS1O60500 AL078601.1-201ENST00000444542 271 ntBASIC4□□□□□ -1.77
NPHS1O60500 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4□□□□□ -1.77
NPHS1O60500 AC013470.1-201ENST00000453438 462 ntBASIC4□□□□□ -1.77
NPHS1O60500 ANP32BP2-201ENST00000454525 545 ntBASIC4□□□□□ -1.77
NPHS1O60500 AF213884.1-201ENST00000488102 463 ntBASIC4□□□□□ -1.77
NPHS1O60500 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4□□□□□ -1.77
NPHS1O60500 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4□□□□□ -1.77
NPHS1O60500 SNORA25.11-201ENST00000515935 105 ntBASIC4□□□□□ -1.77
NPHS1O60500 RNU6-397P-201ENST00000516226 104 ntBASIC4□□□□□ -1.77
NPHS1O60500 RNU6-612P-201ENST00000516909 102 ntBASIC4□□□□□ -1.77
NPHS1O60500 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4□□□□□ -1.77
NPHS1O60500 AC109479.2-201ENST00000517842 174 ntBASIC4□□□□□ -1.77
NPHS1O60500 AP004242.1-201ENST00000533701 349 ntBASIC4□□□□□ -1.77
NPHS1O60500 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4□□□□□ -1.77
NPHS1O60500 TRAV28-201ENST00000557548 323 ntBASIC4□□□□□ -1.77
NPHS1O60500 AMZ2P1-203ENST00000565833 850 ntBASIC4□□□□□ -1.77
NPHS1O60500 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4□□□□□ -1.77
NPHS1O60500 AC090517.1-201ENST00000569307 266 ntBASIC4□□□□□ -1.77
NPHS1O60500 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4□□□□□ -1.77
NPHS1O60500 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4□□□□□ -1.77
NPHS1O60500 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4□□□□□ -1.77
NPHS1O60500 AC100827.5-201ENST00000615883 426 ntBASIC4□□□□□ -1.77
NPHS1O60500 PSMD5-AS1-215ENST00000640622 205 ntBASIC4□□□□□ -1.77
NPHS1O60500 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NPHS1O60500 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4□□□□□ -1.77
NPHS1O60500 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4□□□□□ -1.77
NPHS1O60500 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4□□□□□ -1.77
NPHS1O60500 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
NPHS1O60500 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
NPHS1O60500 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.99□□□□□ -1.77
NPHS1O60500 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NPHS1O60500 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.99□□□□□ -1.77
NPHS1O60500 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.99□□□□□ -1.77
NPHS1O60500 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NPHS1O60500 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
NPHS1O60500 RNA5SP322-201ENST00000363617 119 ntBASIC3.99□□□□□ -1.77
NPHS1O60500 RNA5SP189-201ENST00000364920 115 ntBASIC3.99□□□□□ -1.77
NPHS1O60500 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.99□□□□□ -1.77
NPHS1O60500 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.99□□□□□ -1.77
NPHS1O60500 DEFB109C-201ENST00000382575 264 ntBASIC3.99□□□□□ -1.77
NPHS1O60500 DEFB109B-201ENST00000382656 264 ntBASIC3.99□□□□□ -1.77
NPHS1O60500 Y_RNA.489-201ENST00000384410 101 ntBASIC3.99□□□□□ -1.77
NPHS1O60500 MIR34A-201ENST00000385130 110 ntBASIC3.99□□□□□ -1.77
NPHS1O60500 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NPHS1O60500 SNORA69.1-201ENST00000390904 137 ntBASIC3.99□□□□□ -1.77
NPHS1O60500 RNU6-700P-201ENST00000391043 107 ntBASIC3.99□□□□□ -1.77
NPHS1O60500 SAR1AP2-201ENST00000392696 594 ntBASIC3.99□□□□□ -1.77
NPHS1O60500 RPL17P36-201ENST00000420302 549 ntBASIC3.99□□□□□ -1.77
NPHS1O60500 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.99□□□□□ -1.77
NPHS1O60500 AL590383.1-201ENST00000428602 75 ntBASIC3.99□□□□□ -1.77
NPHS1O60500 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.99□□□□□ -1.77
NPHS1O60500 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NPHS1O60500 AC006011.1-201ENST00000442758 349 ntBASIC3.99□□□□□ -1.77
NPHS1O60500 AC009237.8-201ENST00000445492 379 ntBASIC3.99□□□□□ -1.77
NPHS1O60500 RPL29P14-201ENST00000495837 428 ntBASIC3.99□□□□□ -1.77
NPHS1O60500 AC005921.1-201ENST00000510589 286 ntBASIC3.99□□□□□ -1.77
NPHS1O60500 RNU6-1143P-201ENST00000516125 104 ntBASIC3.99□□□□□ -1.77
NPHS1O60500 RNU2-53P-201ENST00000516257 147 ntBASIC3.99□□□□□ -1.77
NPHS1O60500 RNU2-58P-201ENST00000516403 183 ntBASIC3.99□□□□□ -1.77
NPHS1O60500 Y_RNA.680-201ENST00000516441 93 ntBASIC3.99□□□□□ -1.77
NPHS1O60500 AC023157.2-201ENST00000540596 141 ntBASIC3.99□□□□□ -1.77
NPHS1O60500 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.99□□□□□ -1.77
NPHS1O60500 AC053481.4-201ENST00000583164 216 ntBASIC3.99□□□□□ -1.77
NPHS1O60500 AC136601.2-201ENST00000604356 474 ntBASIC3.99□□□□□ -1.77
NPHS1O60500 AC009318.2-201ENST00000610917 651 ntBASIC3.99□□□□□ -1.77
NPHS1O60500 MIR486-1-201ENST00000612171 68 ntBASIC3.99□□□□□ -1.77
NPHS1O60500 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.99□□□□□ -1.77
NPHS1O60500 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.99□□□□□ -1.77
NPHS1O60500 AL731566.2-201ENST00000618971 317 ntBASIC3.99□□□□□ -1.77
NPHS1O60500 AL159153.1-201ENST00000619688 317 ntBASIC3.99□□□□□ -1.77
NPHS1O60500 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.99□□□□□ -1.77
NPHS1O60500 MAPK10-373ENST00000641983 6772 ntBASIC3.99□□□□□ -1.77
NPHS1O60500 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NPHS1O60500 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.99□□□□□ -1.77
NPHS1O60500 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.99□□□□□ -1.77
NPHS1O60500 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.99□□□□□ -1.77
NPHS1O60500 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NPHS1O60500 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
NPHS1O60500 AC008568.2-201ENST00000623862 2313 ntBASIC3.99□□□□□ -1.77
NPHS1O60500 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.99□□□□□ -1.77
NPHS1O60500 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.98□□□□□ -1.77
NPHS1O60500 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.98□□□□□ -1.77
NPHS1O60500 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NPHS1O60500 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
NPHS1O60500 AC007785.2-201ENST00000598627 1916 ntBASIC3.98□□□□□ -1.77
NPHS1O60500 SNORA7.2-201ENST00000364446 145 ntBASIC3.98□□□□□ -1.77
NPHS1O60500 Y_RNA.257-201ENST00000364596 102 ntBASIC3.98□□□□□ -1.77
NPHS1O60500 Y_RNA.376-201ENST00000365638 108 ntBASIC3.98□□□□□ -1.77
NPHS1O60500 RNU6-708P-201ENST00000384217 107 ntBASIC3.98□□□□□ -1.77
NPHS1O60500 Y_RNA.483-201ENST00000384380 101 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 223.5 ms