Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 RN7SKP258-201ENST00000517151 304 ntBASIC4.03□□□□□ -1.76
KRT40Q6A162 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.03□□□□□ -1.76
KRT40Q6A162 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.03□□□□□ -1.76
KRT40Q6A162 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.03□□□□□ -1.76
KRT40Q6A162 SNRPGP18-201ENST00000553000 214 ntBASIC4.03□□□□□ -1.76
KRT40Q6A162 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.03□□□□□ -1.76
KRT40Q6A162 AC174048.1-201ENST00000603389 144 ntBASIC4.03□□□□□ -1.76
KRT40Q6A162 AC104763.2-201ENST00000604179 382 ntBASIC4.03□□□□□ -1.76
KRT40Q6A162 U2.17-201ENST00000611454 95 ntBASIC4.03□□□□□ -1.76
KRT40Q6A162 SDR42E1P2-201ENST00000614861 481 ntBASIC4.03□□□□□ -1.76
KRT40Q6A162 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KRT40Q6A162 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KRT40Q6A162 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.03□□□□□ -1.77
KRT40Q6A162 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
KRT40Q6A162 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRT40Q6A162 MTND5P19-201ENST00000424872 1794 ntBASIC4.02□□□□□ -1.77
KRT40Q6A162 Y_RNA.422-201ENST00000384054 114 ntBASIC4.02□□□□□ -1.77
KRT40Q6A162 RNU6-601P-201ENST00000384540 107 ntBASIC4.02□□□□□ -1.77
KRT40Q6A162 RNU6-310P-201ENST00000384655 107 ntBASIC4.02□□□□□ -1.77
KRT40Q6A162 RNA5SP111-201ENST00000411386 101 ntBASIC4.02□□□□□ -1.77
KRT40Q6A162 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.02□□□□□ -1.77
KRT40Q6A162 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.02□□□□□ -1.77
KRT40Q6A162 AC113618.1-201ENST00000416747 285 ntBASIC4.02□□□□□ -1.77
KRT40Q6A162 RPL26P6-201ENST00000440913 438 ntBASIC4.02□□□□□ -1.77
KRT40Q6A162 AC104472.2-201ENST00000469035 601 ntBASIC4.02□□□□□ -1.77
KRT40Q6A162 TRBV1-201ENST00000476502 284 ntBASIC4.02□□□□□ -1.77
KRT40Q6A162 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.02□□□□□ -1.77
KRT40Q6A162 AC079140.5-201ENST00000507882 310 ntBASIC4.02□□□□□ -1.77
KRT40Q6A162 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.02□□□□□ -1.77
KRT40Q6A162 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.02□□□□□ -1.77
KRT40Q6A162 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.02□□□□□ -1.77
KRT40Q6A162 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.02□□□□□ -1.77
KRT40Q6A162 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.02□□□□□ -1.77
KRT40Q6A162 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.02□□□□□ -1.77
KRT40Q6A162 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.02□□□□□ -1.77
KRT40Q6A162 AC136443.5-201ENST00000603741 370 ntBASIC4.02□□□□□ -1.77
KRT40Q6A162 AL359547.2-201ENST00000615810 418 ntBASIC4.02□□□□□ -1.77
KRT40Q6A162 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRT40Q6A162 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRT40Q6A162 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRT40Q6A162 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
KRT40Q6A162 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.02□□□□□ -1.77
KRT40Q6A162 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
KRT40Q6A162 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.01□□□□□ -1.77
KRT40Q6A162 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
KRT40Q6A162 MFSD8-233ENST00000641482 4860 ntBASIC4.01□□□□□ -1.77
KRT40Q6A162 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
KRT40Q6A162 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
KRT40Q6A162 HSPA8P1-201ENST00000425843 1833 ntBASIC4.01□□□□□ -1.77
KRT40Q6A162 AC009812.4-201ENST00000569134 1805 ntBASIC4.01□□□□□ -1.77
KRT40Q6A162 Y_RNA.145-201ENST00000363527 102 ntBASIC4.01□□□□□ -1.77
KRT40Q6A162 RNU6-288P-201ENST00000363690 104 ntBASIC4.01□□□□□ -1.77
KRT40Q6A162 SNORA36C-201ENST00000384289 132 ntBASIC4.01□□□□□ -1.77
KRT40Q6A162 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.01□□□□□ -1.77
KRT40Q6A162 MIR1183-201ENST00000408856 89 ntBASIC4.01□□□□□ -1.77
KRT40Q6A162 Y_RNA.646-201ENST00000410980 101 ntBASIC4.01□□□□□ -1.77
KRT40Q6A162 RPL7P10-201ENST00000417407 739 ntBASIC4.01□□□□□ -1.77
KRT40Q6A162 ATG3P1-201ENST00000419507 911 ntBASIC4.01□□□□□ -1.77
KRT40Q6A162 BX842559.1-201ENST00000419615 532 ntBASIC4.01□□□□□ -1.77
KRT40Q6A162 AL160275.3-201ENST00000423876 471 ntBASIC4.01□□□□□ -1.77
KRT40Q6A162 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.01□□□□□ -1.77
KRT40Q6A162 MTATP6P4-201ENST00000427725 675 ntBASIC4.01□□□□□ -1.77
KRT40Q6A162 MTND3P2-201ENST00000438452 342 ntBASIC4.01□□□□□ -1.77
KRT40Q6A162 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.01□□□□□ -1.77
KRT40Q6A162 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.01□□□□□ -1.77
KRT40Q6A162 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.01□□□□□ -1.77
KRT40Q6A162 RPL30P15-201ENST00000457129 321 ntBASIC4.01□□□□□ -1.77
KRT40Q6A162 Y_RNA.653-201ENST00000459091 95 ntBASIC4.01□□□□□ -1.77
KRT40Q6A162 RNU6-1137P-201ENST00000517073 99 ntBASIC4.01□□□□□ -1.77
KRT40Q6A162 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.01□□□□□ -1.77
KRT40Q6A162 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.01□□□□□ -1.77
KRT40Q6A162 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.01□□□□□ -1.77
KRT40Q6A162 AC012493.2-201ENST00000595083 291 ntBASIC4.01□□□□□ -1.77
KRT40Q6A162 AC008737.2-201ENST00000599446 118 ntBASIC4.01□□□□□ -1.77
KRT40Q6A162 YPEL5P2-201ENST00000605553 359 ntBASIC4.01□□□□□ -1.77
KRT40Q6A162 AP000654.2-201ENST00000605633 586 ntBASIC4.01□□□□□ -1.77
KRT40Q6A162 RNVU1-4-201ENST00000612985 164 ntBASIC4.01□□□□□ -1.77
KRT40Q6A162 AC008121.3-201ENST00000618726 433 ntBASIC4.01□□□□□ -1.77
KRT40Q6A162 AL713922.2-201ENST00000619384 716 ntBASIC4.01□□□□□ -1.77
KRT40Q6A162 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.01□□□□□ -1.77
KRT40Q6A162 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
KRT40Q6A162 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
KRT40Q6A162 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
KRT40Q6A162 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
KRT40Q6A162 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4□□□□□ -1.77
KRT40Q6A162 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
KRT40Q6A162 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
KRT40Q6A162 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
KRT40Q6A162 MIR30E-201ENST00000362104 92 ntBASIC4□□□□□ -1.77
KRT40Q6A162 RNU6-562P-201ENST00000362731 107 ntBASIC4□□□□□ -1.77
KRT40Q6A162 Y_RNA.112-201ENST00000363250 102 ntBASIC4□□□□□ -1.77
KRT40Q6A162 SNORA38.1-201ENST00000364172 131 ntBASIC4□□□□□ -1.77
KRT40Q6A162 RNU1-33P-201ENST00000364249 162 ntBASIC4□□□□□ -1.77
KRT40Q6A162 RNU6-1303P-201ENST00000364841 107 ntBASIC4□□□□□ -1.77
KRT40Q6A162 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
KRT40Q6A162 RNU6-629P-201ENST00000384061 103 ntBASIC4□□□□□ -1.77
KRT40Q6A162 RNU6-434P-201ENST00000384376 107 ntBASIC4□□□□□ -1.77
KRT40Q6A162 Y_RNA.510-201ENST00000384511 114 ntBASIC4□□□□□ -1.77
KRT40Q6A162 RPS4XP7-201ENST00000406274 780 ntBASIC4□□□□□ -1.77
KRT40Q6A162 Z98941.1-201ENST00000407764 100 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 161.7 ms