Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 Y_RNA.539-201ENST00000384635 107 ntBASIC4.22□□□□□ -1.73
EPHB3P54753 MIR625-201ENST00000385047 85 ntBASIC4.22□□□□□ -1.73
EPHB3P54753 LAP3P1-201ENST00000403648 294 ntBASIC4.22□□□□□ -1.73
EPHB3P54753 RNA5SP146-201ENST00000410743 123 ntBASIC4.22□□□□□ -1.73
EPHB3P54753 AC073063.1-201ENST00000434352 607 ntBASIC4.22□□□□□ -1.73
EPHB3P54753 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.22□□□□□ -1.73
EPHB3P54753 AC004383.1-201ENST00000438135 289 ntBASIC4.22□□□□□ -1.73
EPHB3P54753 LINC01399-202ENST00000458450 244 ntBASIC4.22□□□□□ -1.73
EPHB3P54753 AC069499.1-201ENST00000489433 509 ntBASIC4.22□□□□□ -1.73
EPHB3P54753 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.22□□□□□ -1.73
EPHB3P54753 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.22□□□□□ -1.73
EPHB3P54753 HIGD1AP3-201ENST00000515857 278 ntBASIC4.22□□□□□ -1.73
EPHB3P54753 AC104576.1-201ENST00000524225 88 ntBASIC4.22□□□□□ -1.73
EPHB3P54753 CBX3P8-201ENST00000532412 525 ntBASIC4.22□□□□□ -1.73
EPHB3P54753 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.22□□□□□ -1.73
EPHB3P54753 MIR3910-1-201ENST00000580936 111 ntBASIC4.22□□□□□ -1.73
EPHB3P54753 AL355812.1-201ENST00000603215 216 ntBASIC4.22□□□□□ -1.73
EPHB3P54753 AL390123.1-201ENST00000603216 237 ntBASIC4.22□□□□□ -1.73
EPHB3P54753 AL160281.1-201ENST00000605307 311 ntBASIC4.22□□□□□ -1.73
EPHB3P54753 AC064801.1-201ENST00000612025 407 ntBASIC4.22□□□□□ -1.73
EPHB3P54753 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
EPHB3P54753 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
EPHB3P54753 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
EPHB3P54753 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
EPHB3P54753 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
EPHB3P54753 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.22□□□□□ -1.73
EPHB3P54753 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.22□□□□□ -1.73
EPHB3P54753 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
EPHB3P54753 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
EPHB3P54753 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.21□□□□□ -1.74
EPHB3P54753 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
EPHB3P54753 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
EPHB3P54753 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.21□□□□□ -1.74
EPHB3P54753 RNU6-371P-201ENST00000364283 108 ntBASIC4.21□□□□□ -1.74
EPHB3P54753 RNA5SP97-201ENST00000365006 84 ntBASIC4.21□□□□□ -1.74
EPHB3P54753 RNU6-338P-201ENST00000383888 105 ntBASIC4.21□□□□□ -1.74
EPHB3P54753 RNU6-356P-201ENST00000384140 107 ntBASIC4.21□□□□□ -1.74
EPHB3P54753 RNU6-611P-201ENST00000384276 104 ntBASIC4.21□□□□□ -1.74
EPHB3P54753 MIR708-201ENST00000390708 88 ntBASIC4.21□□□□□ -1.74
EPHB3P54753 SNORD58.1-201ENST00000391313 66 ntBASIC4.21□□□□□ -1.74
EPHB3P54753 SAR1AP2-201ENST00000392696 594 ntBASIC4.21□□□□□ -1.74
EPHB3P54753 RNU2-14P-201ENST00000411053 191 ntBASIC4.21□□□□□ -1.74
EPHB3P54753 AL030996.1-201ENST00000411430 235 ntBASIC4.21□□□□□ -1.74
EPHB3P54753 MTCO3P19-201ENST00000415864 321 ntBASIC4.21□□□□□ -1.74
EPHB3P54753 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.21□□□□□ -1.74
EPHB3P54753 NDUFB1P2-201ENST00000449477 176 ntBASIC4.21□□□□□ -1.74
EPHB3P54753 RPL21P41-201ENST00000459863 264 ntBASIC4.21□□□□□ -1.74
EPHB3P54753 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.21□□□□□ -1.74
EPHB3P54753 RNU6-397P-201ENST00000516226 104 ntBASIC4.21□□□□□ -1.74
EPHB3P54753 RNU6-911P-201ENST00000516523 104 ntBASIC4.21□□□□□ -1.74
EPHB3P54753 RNA5SP179-201ENST00000517284 121 ntBASIC4.21□□□□□ -1.74
EPHB3P54753 AC034114.1-201ENST00000520293 285 ntBASIC4.21□□□□□ -1.74
EPHB3P54753 AC087369.1-201ENST00000520775 996 ntBASIC4.21□□□□□ -1.74
EPHB3P54753 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.21□□□□□ -1.74
EPHB3P54753 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.21□□□□□ -1.74
EPHB3P54753 CYCSP30-201ENST00000546447 172 ntBASIC4.21□□□□□ -1.74
EPHB3P54753 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.21□□□□□ -1.74
EPHB3P54753 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.21□□□□□ -1.74
EPHB3P54753 AC130289.1-201ENST00000577321 73 ntBASIC4.21□□□□□ -1.74
EPHB3P54753 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.21□□□□□ -1.74
EPHB3P54753 AL034351.1-201ENST00000605288 668 ntBASIC4.21□□□□□ -1.74
EPHB3P54753 RNA5SP108-201ENST00000605921 117 ntBASIC4.21□□□□□ -1.74
EPHB3P54753 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.21□□□□□ -1.74
EPHB3P54753 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.21□□□□□ -1.74
EPHB3P54753 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
EPHB3P54753 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
EPHB3P54753 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.21□□□□□ -1.74
EPHB3P54753 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
EPHB3P54753 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
EPHB3P54753 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
EPHB3P54753 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.2□□□□□ -1.74
EPHB3P54753 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.2□□□□□ -1.74
EPHB3P54753 Y_RNA.150-201ENST00000363562 102 ntBASIC4.2□□□□□ -1.74
EPHB3P54753 MIR200C-201ENST00000384980 68 ntBASIC4.2□□□□□ -1.74
EPHB3P54753 RNU6-817P-201ENST00000391083 104 ntBASIC4.2□□□□□ -1.74
EPHB3P54753 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.2□□□□□ -1.74
EPHB3P54753 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.2□□□□□ -1.74
EPHB3P54753 RN7SL271P-201ENST00000487601 295 ntBASIC4.2□□□□□ -1.74
EPHB3P54753 NDUFB4P9-201ENST00000511646 388 ntBASIC4.2□□□□□ -1.74
EPHB3P54753 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.2□□□□□ -1.74
EPHB3P54753 Y_RNA.687-201ENST00000516558 91 ntBASIC4.2□□□□□ -1.74
EPHB3P54753 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.2□□□□□ -1.74
EPHB3P54753 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.2□□□□□ -1.74
EPHB3P54753 AC144568.1-201ENST00000520139 137 ntBASIC4.2□□□□□ -1.74
EPHB3P54753 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.2□□□□□ -1.74
EPHB3P54753 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.2□□□□□ -1.74
EPHB3P54753 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.2□□□□□ -1.74
EPHB3P54753 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.2□□□□□ -1.74
EPHB3P54753 AC091167.4-201ENST00000605079 184 ntBASIC4.2□□□□□ -1.74
EPHB3P54753 RNU6-85P-201ENST00000605989 107 ntBASIC4.2□□□□□ -1.74
EPHB3P54753 AC005344.1-201ENST00000613391 459 ntBASIC4.2□□□□□ -1.74
EPHB3P54753 AP001282.2-201ENST00000616149 309 ntBASIC4.2□□□□□ -1.74
EPHB3P54753 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.2□□□□□ -1.74
EPHB3P54753 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
EPHB3P54753 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
EPHB3P54753 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
EPHB3P54753 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
EPHB3P54753 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
EPHB3P54753 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
EPHB3P54753 MIR335-201ENST00000362173 94 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 197.9 ms