Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RNA5SP87-201ENST00000384155 118 ntBASIC4.69□□□□□ -1.66
NFKB1P19838 RNU6-17P-201ENST00000384245 107 ntBASIC4.69□□□□□ -1.66
NFKB1P19838 RNU6-318P-201ENST00000384283 103 ntBASIC4.69□□□□□ -1.66
NFKB1P19838 RNU6-18P-201ENST00000384527 107 ntBASIC4.69□□□□□ -1.66
NFKB1P19838 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
NFKB1P19838 MIR550A3-201ENST00000390735 95 ntBASIC4.69□□□□□ -1.66
NFKB1P19838 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.69□□□□□ -1.66
NFKB1P19838 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.69□□□□□ -1.66
NFKB1P19838 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.69□□□□□ -1.66
NFKB1P19838 RN7SL610P-201ENST00000463845 291 ntBASIC4.69□□□□□ -1.66
NFKB1P19838 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.69□□□□□ -1.66
NFKB1P19838 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.69□□□□□ -1.66
NFKB1P19838 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.69□□□□□ -1.66
NFKB1P19838 RNA5SP290-201ENST00000517133 127 ntBASIC4.69□□□□□ -1.66
NFKB1P19838 RAB9BP1-201ENST00000519581 626 ntBASIC4.69□□□□□ -1.66
NFKB1P19838 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.69□□□□□ -1.66
NFKB1P19838 AP001485.1-201ENST00000604799 199 ntBASIC4.69□□□□□ -1.66
NFKB1P19838 AC131238.1-201ENST00000617135 328 ntBASIC4.69□□□□□ -1.66
NFKB1P19838 AC005086.4-201ENST00000623065 213 ntBASIC4.69□□□□□ -1.66
NFKB1P19838 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
NFKB1P19838 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
NFKB1P19838 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
NFKB1P19838 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NFKB1P19838 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.69□□□□□ -1.66
NFKB1P19838 AL139811.1-201ENST00000424779 2299 ntBASIC4.69□□□□□ -1.66
NFKB1P19838 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NFKB1P19838 AC015813.6-201ENST00000624409 5808 ntBASIC4.68□□□□□ -1.66
NFKB1P19838 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NFKB1P19838 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NFKB1P19838 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NFKB1P19838 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
NFKB1P19838 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
NFKB1P19838 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NFKB1P19838 Y_RNA.233-201ENST00000364407 101 ntBASIC4.68□□□□□ -1.66
NFKB1P19838 Y_RNA.275-201ENST00000364726 110 ntBASIC4.68□□□□□ -1.66
NFKB1P19838 Y_RNA.383-201ENST00000383855 97 ntBASIC4.68□□□□□ -1.66
NFKB1P19838 RNU6-926P-201ENST00000384075 107 ntBASIC4.68□□□□□ -1.66
NFKB1P19838 MIR921-201ENST00000401133 56 ntBASIC4.68□□□□□ -1.66
NFKB1P19838 Z98745.1-201ENST00000402553 494 ntBASIC4.68□□□□□ -1.66
NFKB1P19838 Y_RNA.590-201ENST00000410140 107 ntBASIC4.68□□□□□ -1.66
NFKB1P19838 RNU2-61P-201ENST00000411069 191 ntBASIC4.68□□□□□ -1.66
NFKB1P19838 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.68□□□□□ -1.66
NFKB1P19838 MTCO1P5-201ENST00000433573 344 ntBASIC4.68□□□□□ -1.66
NFKB1P19838 AC009296.1-201ENST00000443146 155 ntBASIC4.68□□□□□ -1.66
NFKB1P19838 AC016700.2-201ENST00000446011 156 ntBASIC4.68□□□□□ -1.66
NFKB1P19838 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.68□□□□□ -1.66
NFKB1P19838 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NFKB1P19838 AC092798.1-201ENST00000458542 409 ntBASIC4.68□□□□□ -1.66
NFKB1P19838 SCARNA10-201ENST00000459255 330 ntBASIC4.68□□□□□ -1.66
NFKB1P19838 RN7SKP272-201ENST00000516988 232 ntBASIC4.68□□□□□ -1.66
NFKB1P19838 MTND5P41-201ENST00000517498 206 ntBASIC4.68□□□□□ -1.66
NFKB1P19838 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.68□□□□□ -1.66
NFKB1P19838 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.68□□□□□ -1.66
NFKB1P19838 MIR3144-201ENST00000579460 79 ntBASIC4.68□□□□□ -1.66
NFKB1P19838 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC4.68□□□□□ -1.66
NFKB1P19838 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.68□□□□□ -1.66
NFKB1P19838 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.68□□□□□ -1.66
NFKB1P19838 MIR6730-201ENST00000622213 67 ntBASIC4.68□□□□□ -1.66
NFKB1P19838 MAPK10-303ENST00000641324 3959 ntBASIC4.68□□□□□ -1.66
NFKB1P19838 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NFKB1P19838 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
NFKB1P19838 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.68□□□□□ -1.66
NFKB1P19838 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
NFKB1P19838 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
NFKB1P19838 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NFKB1P19838 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.68□□□□□ -1.66
NFKB1P19838 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.67□□□□□ -1.66
NFKB1P19838 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
NFKB1P19838 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NFKB1P19838 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
NFKB1P19838 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NFKB1P19838 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NFKB1P19838 RNU6-78P-201ENST00000362897 107 ntBASIC4.67□□□□□ -1.66
NFKB1P19838 Y_RNA.82-201ENST00000363000 102 ntBASIC4.67□□□□□ -1.66
NFKB1P19838 Y_RNA.92-201ENST00000363043 102 ntBASIC4.67□□□□□ -1.66
NFKB1P19838 Y_RNA.235-201ENST00000364412 102 ntBASIC4.67□□□□□ -1.66
NFKB1P19838 Y_RNA.304-201ENST00000365011 112 ntBASIC4.67□□□□□ -1.66
NFKB1P19838 Y_RNA.306-201ENST00000365015 102 ntBASIC4.67□□□□□ -1.66
NFKB1P19838 Y_RNA.312-201ENST00000365089 102 ntBASIC4.67□□□□□ -1.66
NFKB1P19838 Y_RNA.322-201ENST00000365151 102 ntBASIC4.67□□□□□ -1.66
NFKB1P19838 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NFKB1P19838 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.67□□□□□ -1.66
NFKB1P19838 RNU6-804P-201ENST00000384286 107 ntBASIC4.67□□□□□ -1.66
NFKB1P19838 Y_RNA.569-201ENST00000384749 103 ntBASIC4.67□□□□□ -1.66
NFKB1P19838 RPS4XP3-201ENST00000398541 413 ntBASIC4.67□□□□□ -1.66
NFKB1P19838 RNU6-651P-201ENST00000411040 105 ntBASIC4.67□□□□□ -1.66
NFKB1P19838 RN7SKP216-201ENST00000411050 312 ntBASIC4.67□□□□□ -1.66
NFKB1P19838 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.67□□□□□ -1.66
NFKB1P19838 AC007560.1-201ENST00000426912 237 ntBASIC4.67□□□□□ -1.66
NFKB1P19838 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.67□□□□□ -1.66
NFKB1P19838 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.67□□□□□ -1.66
NFKB1P19838 RPS15AP7-201ENST00000439294 405 ntBASIC4.67□□□□□ -1.66
NFKB1P19838 AL078601.1-201ENST00000444542 271 ntBASIC4.67□□□□□ -1.66
NFKB1P19838 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.67□□□□□ -1.66
NFKB1P19838 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.67□□□□□ -1.66
NFKB1P19838 Y_RNA.650-201ENST00000459002 102 ntBASIC4.67□□□□□ -1.66
NFKB1P19838 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
NFKB1P19838 RNA5SP446-201ENST00000515955 82 ntBASIC4.67□□□□□ -1.66
NFKB1P19838 RNU6-1256P-201ENST00000516539 103 ntBASIC4.67□□□□□ -1.66
NFKB1P19838 Y_RNA.777-201ENST00000516982 102 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 249.4 ms