Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5□□□□□ -1.61
TMEM88BA6NKF7 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TMEM88BA6NKF7 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TMEM88BA6NKF7 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5□□□□□ -1.61
TMEM88BA6NKF7 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 AP000542.2-201ENST00000623199 6179 ntBASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 RNU1-20P-201ENST00000363314 162 ntBASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 RNU4-50P-201ENST00000364361 141 ntBASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 RNU6-450P-201ENST00000364654 107 ntBASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 RNU6-713P-201ENST00000384761 107 ntBASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 RNA5SP31-201ENST00000411144 127 ntBASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 RN7SKP53-201ENST00000411337 315 ntBASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 HSPE1P12-201ENST00000412576 301 ntBASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 AL691449.1-201ENST00000426570 421 ntBASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 AP000907.1-201ENST00000428428 510 ntBASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 AL591043.1-201ENST00000432461 424 ntBASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 RPL35AP21-201ENST00000437667 333 ntBASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 AC133473.1-201ENST00000455173 299 ntBASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 U8.20-201ENST00000459445 131 ntBASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 RPL35AP15-201ENST00000468042 339 ntBASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 RNU1-61P-201ENST00000516107 151 ntBASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 RN7SKP289-201ENST00000517244 295 ntBASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 CASP1P1-201ENST00000526345 212 ntBASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 AC040926.1-201ENST00000530195 238 ntBASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 AL590705.4-201ENST00000532209 134 ntBASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 AC011602.1-201ENST00000546484 331 ntBASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 AC110588.1-201ENST00000559699 137 ntBASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 MIR5188-201ENST00000583467 113 ntBASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 AC009318.2-201ENST00000610917 651 ntBASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 AL022311.1-201ENST00000623726 19416 ntBASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TMEM88BA6NKF7 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
TMEM88BA6NKF7 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
TMEM88BA6NKF7 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
TMEM88BA6NKF7 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
TMEM88BA6NKF7 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
TMEM88BA6NKF7 RNU1-73P-201ENST00000383971 164 ntBASIC4.98□□□□□ -1.61
TMEM88BA6NKF7 U3.42-201ENST00000408746 214 ntBASIC4.98□□□□□ -1.61
TMEM88BA6NKF7 NDUFS5P4-201ENST00000412983 318 ntBASIC4.98□□□□□ -1.61
TMEM88BA6NKF7 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.98□□□□□ -1.61
TMEM88BA6NKF7 SNRPGP5-201ENST00000456003 220 ntBASIC4.98□□□□□ -1.61
TMEM88BA6NKF7 RPS29P2-201ENST00000479278 136 ntBASIC4.98□□□□□ -1.61
TMEM88BA6NKF7 SNORA31.18-201ENST00000517043 134 ntBASIC4.98□□□□□ -1.61
TMEM88BA6NKF7 Y_RNA.715-201ENST00000517082 110 ntBASIC4.98□□□□□ -1.61
TMEM88BA6NKF7 AC131281.1-201ENST00000522984 164 ntBASIC4.98□□□□□ -1.61
TMEM88BA6NKF7 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.98□□□□□ -1.61
TMEM88BA6NKF7 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.98□□□□□ -1.61
TMEM88BA6NKF7 AC024153.1-201ENST00000603103 365 ntBASIC4.98□□□□□ -1.61
TMEM88BA6NKF7 U2.1-201ENST00000618978 145 ntBASIC4.98□□□□□ -1.61
TMEM88BA6NKF7 AC048347.1-201ENST00000624621 427 ntBASIC4.98□□□□□ -1.61
TMEM88BA6NKF7 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.98□□□□□ -1.61
TMEM88BA6NKF7 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.98□□□□□ -1.61
TMEM88BA6NKF7 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.98□□□□□ -1.61
TMEM88BA6NKF7 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TMEM88BA6NKF7 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 RNU6-336P-201ENST00000364891 107 ntBASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 SET-203ENST00000372688 801 ntTSL 2 BASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 RNU6-784P-201ENST00000384330 106 ntBASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 RNVU1-14-201ENST00000384770 164 ntBASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 MIR30B-201ENST00000384850 88 ntBASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 RNU6-1109P-201ENST00000391187 107 ntBASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 OSTCP8-201ENST00000445117 448 ntBASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 RNU7-169P-201ENST00000459456 61 ntBASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 UBE2CP3-201ENST00000502715 450 ntBASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 RPL23AP94-201ENST00000512518 302 ntBASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 AC006349.1-201ENST00000555526 235 ntBASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 CYCSP39-201ENST00000565821 309 ntBASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 MIR5701-3-201ENST00000578890 82 ntBASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 MIR5701-1-201ENST00000585138 82 ntBASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 MIR1244-1-201ENST00000612829 85 ntBASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 MIR5701-2-201ENST00000615634 82 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 212.1 ms