Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.97□□□□□ -2.25
TRAV13-1A0A0B4J241 AL590365.1-201ENST00000450788 243 ntBASIC0.97□□□□□ -2.25
TRAV13-1A0A0B4J241 AC013267.1-201ENST00000458227 267 ntBASIC0.97□□□□□ -2.25
TRAV13-1A0A0B4J241 RNU7-140P-201ENST00000459546 60 ntBASIC0.97□□□□□ -2.25
TRAV13-1A0A0B4J241 AC112771.1-201ENST00000463581 102 ntBASIC0.97□□□□□ -2.25
TRAV13-1A0A0B4J241 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.97□□□□□ -2.25
TRAV13-1A0A0B4J241 RNA5SP61-201ENST00000516453 100 ntBASIC0.97□□□□□ -2.25
TRAV13-1A0A0B4J241 RNU6-667P-201ENST00000517186 102 ntBASIC0.97□□□□□ -2.25
TRAV13-1A0A0B4J241 CA1-215ENST00000522389 551 ntTSL 3 BASIC0.97□□□□□ -2.25
TRAV13-1A0A0B4J241 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC0.97□□□□□ -2.25
TRAV13-1A0A0B4J241 AC005832.3-201ENST00000537929 631 ntBASIC0.97□□□□□ -2.25
TRAV13-1A0A0B4J241 PSMA3P-201ENST00000555485 635 ntBASIC0.97□□□□□ -2.25
TRAV13-1A0A0B4J241 MIR4422-201ENST00000581938 83 ntBASIC0.97□□□□□ -2.25
TRAV13-1A0A0B4J241 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC0.97□□□□□ -2.25
TRAV13-1A0A0B4J241 AL035411.2-201ENST00000604022 421 ntBASIC0.97□□□□□ -2.25
TRAV13-1A0A0B4J241 AC010900.2-201ENST00000604508 210 ntBASIC0.97□□□□□ -2.25
TRAV13-1A0A0B4J241 AC084824.4-201ENST00000620106 731 ntBASIC0.97□□□□□ -2.25
TRAV13-1A0A0B4J241 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.97□□□□□ -2.25
TRAV13-1A0A0B4J241 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 RNU6-661P-201ENST00000362409 107 ntBASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 SUGT1P1-201ENST00000379514 476 ntBASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 RNU6-658P-201ENST00000384606 106 ntBASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 MIR597-201ENST00000384968 97 ntBASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 RNU11-3P-201ENST00000391111 133 ntBASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 RNU2-36P-201ENST00000410361 191 ntBASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 RNU2-68P-201ENST00000410878 191 ntBASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 RNU2-41P-201ENST00000410991 178 ntBASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 AL358453.1-201ENST00000422522 250 ntBASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 AL121882.1-201ENST00000422893 417 ntBASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 MTCYBP11-201ENST00000447254 1109 ntBASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 BX322784.1-201ENST00000455793 1077 ntBASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 RPL21P47-201ENST00000483696 477 ntBASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 AC011005.2-201ENST00000487324 359 ntBASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 FAM92A1P2-202ENST00000504766 877 ntBASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 AC119751.5-201ENST00000514077 770 ntBASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 SNORA48.9-201ENST00000516419 162 ntBASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 AC073544.2-201ENST00000601155 540 ntBASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 BNIP3P19-201ENST00000605397 577 ntBASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 AP003476.1-201ENST00000623984 516 ntBASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 AC087821.2-201ENST00000637086 450 ntBASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.96□□□□□ -2.26
TRAV13-1A0A0B4J241 AC091812.1-201ENST00000432235 1948 ntBASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 Y_RNA.111-201ENST00000363248 100 ntBASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 RNU6-1066P-201ENST00000363573 105 ntBASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 RNU6-203P-201ENST00000384038 104 ntBASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 MIR506-201ENST00000384998 124 ntBASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 RNU1-78P-201ENST00000391248 165 ntBASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 HMGB3P12-201ENST00000438745 556 ntBASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 RPL39P6-201ENST00000448289 150 ntBASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 MTND5P8-201ENST00000449817 1083 ntBASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 RN7SKP179-201ENST00000516126 217 ntBASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 RNU6-703P-201ENST00000516946 107 ntBASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 AC022861.1-201ENST00000522981 663 ntBASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 AC125611.1-201ENST00000549563 229 ntBASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 MRPS36P5-201ENST00000551909 298 ntBASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 MIR4255-201ENST00000579351 72 ntBASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 AL139344.1-201ENST00000605228 195 ntBASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 AC021755.4-201ENST00000616620 456 ntBASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 AC138627.2-201ENST00000624202 601 ntBASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 ATM-230ENST00000640388 578 ntTSL 5 BASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.95□□□□□ -2.26
TRAV13-1A0A0B4J241 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC0.94□□□□□ -2.26
TRAV13-1A0A0B4J241 RBBP8P1-201ENST00000449447 1844 ntBASIC0.94□□□□□ -2.26
TRAV13-1A0A0B4J241 RNA5SP190-201ENST00000365222 118 ntBASIC0.94□□□□□ -2.26
TRAV13-1A0A0B4J241 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC0.94□□□□□ -2.26
TRAV13-1A0A0B4J241 AL139421.1-201ENST00000423010 169 ntBASIC0.94□□□□□ -2.26
TRAV13-1A0A0B4J241 TOMM22P2-201ENST00000430735 237 ntBASIC0.94□□□□□ -2.26
TRAV13-1A0A0B4J241 RNFT1P2-201ENST00000443064 757 ntBASIC0.94□□□□□ -2.26
TRAV13-1A0A0B4J241 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.94□□□□□ -2.26
TRAV13-1A0A0B4J241 AC007677.1-201ENST00000445757 515 ntBASIC0.94□□□□□ -2.26
TRAV13-1A0A0B4J241 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 189.2 ms