Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.01□□□□□ -2.09
CCNB1IP1Q9NPC3 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.01□□□□□ -2.09
CCNB1IP1Q9NPC3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.01□□□□□ -2.09
CCNB1IP1Q9NPC3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.01□□□□□ -2.09
CCNB1IP1Q9NPC3 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.01□□□□□ -2.09
CCNB1IP1Q9NPC3 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.01□□□□□ -2.09
CCNB1IP1Q9NPC3 RNU6-1183P-201ENST00000517054 60 ntBASIC2.01□□□□□ -2.09
CCNB1IP1Q9NPC3 SNORA31.25-201ENST00000517242 134 ntBASIC2.01□□□□□ -2.09
CCNB1IP1Q9NPC3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
CCNB1IP1Q9NPC3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.01□□□□□ -2.09
CCNB1IP1Q9NPC3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.01□□□□□ -2.09
CCNB1IP1Q9NPC3 OR11H5P-201ENST00000554039 926 ntBASIC2.01□□□□□ -2.09
CCNB1IP1Q9NPC3 YWHAZP1-201ENST00000556286 722 ntBASIC2.01□□□□□ -2.09
CCNB1IP1Q9NPC3 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.01□□□□□ -2.09
CCNB1IP1Q9NPC3 AL138963.2-201ENST00000605137 226 ntBASIC2.01□□□□□ -2.09
CCNB1IP1Q9NPC3 AC068276.1-201ENST00000605793 379 ntBASIC2.01□□□□□ -2.09
CCNB1IP1Q9NPC3 AC018645.2-201ENST00000609151 472 ntBASIC2.01□□□□□ -2.09
CCNB1IP1Q9NPC3 AP001486.3-201ENST00000615334 372 ntBASIC2.01□□□□□ -2.09
CCNB1IP1Q9NPC3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CCNB1IP1Q9NPC3 AL109620.1-201ENST00000618738 1197 ntBASIC2.01□□□□□ -2.09
CCNB1IP1Q9NPC3 AC013470.4-201ENST00000619978 986 ntBASIC2.01□□□□□ -2.09
CCNB1IP1Q9NPC3 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.01□□□□□ -2.09
CCNB1IP1Q9NPC3 AP000776.1-201ENST00000530032 1663 ntBASIC2.01□□□□□ -2.09
CCNB1IP1Q9NPC3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 CDC27P3-201ENST00000635418 1910 ntBASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 RNU6-14P-201ENST00000384630 106 ntBASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 RNU6-748P-201ENST00000384648 107 ntBASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 RN7SKP158-201ENST00000410453 326 ntBASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 RNA5SP338-201ENST00000410495 85 ntBASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 AC009963.1-201ENST00000417265 157 ntBASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 AC005005.2-201ENST00000420779 380 ntBASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 UBE2D3P1-201ENST00000436669 444 ntBASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 MTCO2P20-201ENST00000437339 673 ntBASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 AC018437.1-201ENST00000492214 406 ntBASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 AC093281.2-201ENST00000510153 597 ntBASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 RNA5SP281-201ENST00000516504 135 ntBASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 RNA5SP364-201ENST00000516938 78 ntBASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 AP006587.4-201ENST00000526053 529 ntBASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 AC118273.2-201ENST00000532092 465 ntBASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 AC012435.1-202ENST00000568772 240 ntBASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 MTCYBP22-201ENST00000603788 447 ntBASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 RNU6-88P-201ENST00000606801 100 ntBASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 MIR6852-201ENST00000621699 66 ntBASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 DUXAP9-208ENST00000622815 614 ntBASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 AL136313.1-201ENST00000624804 202 ntBASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
CCNB1IP1Q9NPC3 AC092125.1-201ENST00000562568 1995 ntBASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 Y_RNA.111-201ENST00000363248 100 ntBASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 Z98749.2-208ENST00000381646 500 ntBASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 CIR1P3-201ENST00000405137 479 ntBASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 NDUFS5P1-201ENST00000405668 289 ntBASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 VN1R51P-201ENST00000411675 945 ntBASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 HMGB1P27-201ENST00000431429 603 ntBASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 BRK1P2-201ENST00000442875 223 ntBASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 AC092001.1-201ENST00000453012 261 ntBASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 RNA5SP233-201ENST00000459153 113 ntBASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 AC055731.1-201ENST00000474387 401 ntBASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 DEFB108A-201ENST00000530110 222 ntBASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 AP002770.2-201ENST00000543613 532 ntBASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 RPS3AP4-201ENST00000555161 764 ntBASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 AC136618.2-201ENST00000575091 400 ntBASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 AC090079.2-201ENST00000575289 768 ntBASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 MIR4672-201ENST00000583126 81 ntBASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 MIR3935-201ENST00000583472 104 ntBASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 AC007229.1-201ENST00000590455 412 ntBASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 AC002984.1-201ENST00000591692 448 ntBASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 AC068790.3-201ENST00000602988 553 ntBASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 AC009314.1-201ENST00000603871 304 ntBASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 APOOP1-201ENST00000604695 592 ntBASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 AL136981.2-201ENST00000617319 734 ntBASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 MIR6134-201ENST00000617606 109 ntBASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 SDR42E1P4-201ENST00000620894 481 ntBASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 MIR6132-201ENST00000622083 109 ntBASIC1.99□□□□□ -2.09
CCNB1IP1Q9NPC3 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CCNB1IP1Q9NPC3 AL359851.1-201ENST00000569460 4997 ntBASIC1.98□□□□□ -2.09
CCNB1IP1Q9NPC3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms