Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 SNORA31.22-201ENST00000517204 135 ntBASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 AC005255.1-201ENST00000593748 216 ntBASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 AC083809.1-201ENST00000615051 472 ntBASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC61Q9Y6R9 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC61Q9Y6R9 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
CCDC61Q9Y6R9 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.82□□□□□ -1.32
CCDC61Q9Y6R9 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
CCDC61Q9Y6R9 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC61Q9Y6R9 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC61Q9Y6R9 SNORA70.6-201ENST00000383934 134 ntBASIC6.82□□□□□ -1.32
CCDC61Q9Y6R9 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC61Q9Y6R9 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC6.82□□□□□ -1.32
CCDC61Q9Y6R9 RNU6-625P-201ENST00000459412 107 ntBASIC6.82□□□□□ -1.32
CCDC61Q9Y6R9 RNU6-762P-201ENST00000517107 102 ntBASIC6.82□□□□□ -1.32
CCDC61Q9Y6R9 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC6.82□□□□□ -1.32
CCDC61Q9Y6R9 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC6.82□□□□□ -1.32
CCDC61Q9Y6R9 AL590392.1-201ENST00000604960 446 ntBASIC6.82□□□□□ -1.32
CCDC61Q9Y6R9 AL357075.2-201ENST00000614906 189 ntBASIC6.82□□□□□ -1.32
CCDC61Q9Y6R9 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC61Q9Y6R9 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC61Q9Y6R9 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC61Q9Y6R9 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.82□□□□□ -1.32
CCDC61Q9Y6R9 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
CCDC61Q9Y6R9 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC61Q9Y6R9 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC61Q9Y6R9 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC61Q9Y6R9 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
CCDC61Q9Y6R9 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.81□□□□□ -1.32
CCDC61Q9Y6R9 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC61Q9Y6R9 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
CCDC61Q9Y6R9 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC61Q9Y6R9 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.81□□□□□ -1.32
CCDC61Q9Y6R9 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC61Q9Y6R9 Y_RNA.293-201ENST00000364908 93 ntBASIC6.81□□□□□ -1.32
CCDC61Q9Y6R9 MIR15B-201ENST00000385045 98 ntBASIC6.81□□□□□ -1.32
CCDC61Q9Y6R9 SNORA75.5-201ENST00000391291 81 ntBASIC6.81□□□□□ -1.32
CCDC61Q9Y6R9 RNA5SP241-201ENST00000391326 114 ntBASIC6.81□□□□□ -1.32
CCDC61Q9Y6R9 AL714022.1-201ENST00000439897 151 ntBASIC6.81□□□□□ -1.32
CCDC61Q9Y6R9 BX276092.4-201ENST00000452056 248 ntBASIC6.81□□□□□ -1.32
CCDC61Q9Y6R9 SCARNA22-201ENST00000503991 125 ntBASIC6.81□□□□□ -1.32
CCDC61Q9Y6R9 RNU6-58P-201ENST00000517143 103 ntBASIC6.81□□□□□ -1.32
CCDC61Q9Y6R9 AC007390.2-201ENST00000606229 3803 ntBASIC6.81□□□□□ -1.32
CCDC61Q9Y6R9 AC004467.1-201ENST00000615678 330 ntBASIC6.81□□□□□ -1.32
CCDC61Q9Y6R9 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC61Q9Y6R9 AC134026.1-201ENST00000623249 2239 ntBASIC6.81□□□□□ -1.32
CCDC61Q9Y6R9 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC61Q9Y6R9 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
CCDC61Q9Y6R9 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC61Q9Y6R9 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC61Q9Y6R9 ZNF702P-202ENST00000434269 1966 ntBASIC6.8□□□□□ -1.32
CCDC61Q9Y6R9 AC018555.1-201ENST00000567548 1980 ntBASIC6.8□□□□□ -1.32
CCDC61Q9Y6R9 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC61Q9Y6R9 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC61Q9Y6R9 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC6.8□□□□□ -1.32
CCDC61Q9Y6R9 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC61Q9Y6R9 Y_RNA.393-201ENST00000383936 102 ntBASIC6.8□□□□□ -1.32
CCDC61Q9Y6R9 RNU6-880P-201ENST00000384526 107 ntBASIC6.8□□□□□ -1.32
CCDC61Q9Y6R9 MIR616-201ENST00000385293 97 ntBASIC6.8□□□□□ -1.32
CCDC61Q9Y6R9 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC6.8□□□□□ -1.32
CCDC61Q9Y6R9 snoU13.1-201ENST00000459157 104 ntBASIC6.8□□□□□ -1.32
CCDC61Q9Y6R9 RN7SL385P-201ENST00000468873 276 ntBASIC6.8□□□□□ -1.32
CCDC61Q9Y6R9 AC020593.1-201ENST00000507399 299 ntBASIC6.8□□□□□ -1.32
CCDC61Q9Y6R9 ENPP7P9-201ENST00000514456 627 ntBASIC6.8□□□□□ -1.32
CCDC61Q9Y6R9 CYCSP23-201ENST00000519781 313 ntBASIC6.8□□□□□ -1.32
CCDC61Q9Y6R9 AL391813.1-201ENST00000603098 260 ntBASIC6.8□□□□□ -1.32
CCDC61Q9Y6R9 AL161798.1-201ENST00000604630 131 ntBASIC6.8□□□□□ -1.32
CCDC61Q9Y6R9 uc_338.28-201ENST00000612082 187 ntBASIC6.8□□□□□ -1.32
CCDC61Q9Y6R9 AC013791.1-201ENST00000616619 62 ntBASIC6.8□□□□□ -1.32
CCDC61Q9Y6R9 MIR6853-201ENST00000619642 74 ntBASIC6.8□□□□□ -1.32
CCDC61Q9Y6R9 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
CCDC61Q9Y6R9 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.8□□□□□ -1.32
CCDC61Q9Y6R9 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC6.8□□□□□ -1.32
CCDC61Q9Y6R9 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC61Q9Y6R9 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
CCDC61Q9Y6R9 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC61Q9Y6R9 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC61Q9Y6R9 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC61Q9Y6R9 AL596211.1-201ENST00000569873 2277 ntBASIC6.79□□□□□ -1.32
CCDC61Q9Y6R9 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC61Q9Y6R9 AC114755.2-201ENST00000413520 361 ntBASIC6.79□□□□□ -1.32
CCDC61Q9Y6R9 AC010095.1-201ENST00000443543 144 ntBASIC6.79□□□□□ -1.32
CCDC61Q9Y6R9 RPS17P2-201ENST00000461663 408 ntBASIC6.79□□□□□ -1.32
CCDC61Q9Y6R9 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC6.79□□□□□ -1.32
CCDC61Q9Y6R9 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC6.79□□□□□ -1.32
CCDC61Q9Y6R9 AL121890.5-201ENST00000620848 304 ntBASIC6.79□□□□□ -1.32
CCDC61Q9Y6R9 PSMD5-AS1-215ENST00000640622 205 ntBASIC6.79□□□□□ -1.32
CCDC61Q9Y6R9 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC6.79□□□□□ -1.32
CCDC61Q9Y6R9 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC61Q9Y6R9 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC61Q9Y6R9 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC61Q9Y6R9 AL355834.1-201ENST00000556602 3965 ntBASIC6.79□□□□□ -1.32
CCDC61Q9Y6R9 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC61Q9Y6R9 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCDC61Q9Y6R9 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms