Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 MTCO1P5-201ENST00000433573 344 ntBASIC5.15□□□□□ -1.59
PCDHB9Q9Y5E1 RPL23AP81-201ENST00000455252 467 ntBASIC5.15□□□□□ -1.59
PCDHB9Q9Y5E1 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDHB9Q9Y5E1 RPL30P1-201ENST00000488676 339 ntBASIC5.15□□□□□ -1.59
PCDHB9Q9Y5E1 RN7SL244P-201ENST00000493405 297 ntBASIC5.15□□□□□ -1.59
PCDHB9Q9Y5E1 RNU7-200P-201ENST00000516105 62 ntBASIC5.15□□□□□ -1.59
PCDHB9Q9Y5E1 RN7SKP276-201ENST00000516242 268 ntBASIC5.15□□□□□ -1.59
PCDHB9Q9Y5E1 AC008033.2-201ENST00000542626 177 ntBASIC5.15□□□□□ -1.59
PCDHB9Q9Y5E1 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDHB9Q9Y5E1 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.15□□□□□ -1.59
PCDHB9Q9Y5E1 AC099506.2-201ENST00000623074 221 ntBASIC5.15□□□□□ -1.59
PCDHB9Q9Y5E1 Clostridiales-1.2-201ENST00000636724 160 ntBASIC5.15□□□□□ -1.59
PCDHB9Q9Y5E1 AC241585.2-209ENST00000638217 143 ntBASIC5.15□□□□□ -1.59
PCDHB9Q9Y5E1 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PCDHB9Q9Y5E1 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.59
PCDHB9Q9Y5E1 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PCDHB9Q9Y5E1 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PCDHB9Q9Y5E1 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PCDHB9Q9Y5E1 SAMMSON-226ENST00000642089 1582 ntBASIC5.15□□□□□ -1.59
PCDHB9Q9Y5E1 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PCDHB9Q9Y5E1 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
PCDHB9Q9Y5E1 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PCDHB9Q9Y5E1 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PCDHB9Q9Y5E1 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDHB9Q9Y5E1 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PCDHB9Q9Y5E1 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PCDHB9Q9Y5E1 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
PCDHB9Q9Y5E1 AC099654.2-201ENST00000433031 1980 ntBASIC5.15□□□□□ -1.59
PCDHB9Q9Y5E1 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 SNORA2.3-201ENST00000383920 135 ntBASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 MIR153-2-201ENST00000385225 87 ntBASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 AL035079.1-201ENST00000405210 287 ntBASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 Y_RNA.590-201ENST00000410140 107 ntBASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 SNORD12B-201ENST00000410433 91 ntBASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 RNU6-651P-201ENST00000411040 105 ntBASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 RNU2-61P-201ENST00000411069 191 ntBASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 EIF1AXP1-201ENST00000419267 435 ntBASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 RPS12P23-201ENST00000419579 400 ntBASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 OR2AM1P-201ENST00000422137 422 ntBASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 DDX39BP1-205ENST00000422507 192 ntBASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 AC068287.1-201ENST00000430283 295 ntBASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 AC073901.1-201ENST00000462471 408 ntBASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 AC091021.1-201ENST00000468051 388 ntBASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 RN7SL354P-201ENST00000469282 294 ntBASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 AP000870.1-201ENST00000472927 406 ntBASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 TRAV28-201ENST00000557548 323 ntBASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 AC063976.2-201ENST00000425667 3556 ntBASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 SDAD1P1-202ENST00000524156 2051 ntBASIC5.14□□□□□ -1.59
PCDHB9Q9Y5E1 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB9Q9Y5E1 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB9Q9Y5E1 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB9Q9Y5E1 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
PCDHB9Q9Y5E1 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB9Q9Y5E1 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
PCDHB9Q9Y5E1 Y_RNA.82-201ENST00000363000 102 ntBASIC5.13□□□□□ -1.59
PCDHB9Q9Y5E1 Y_RNA.92-201ENST00000363043 102 ntBASIC5.13□□□□□ -1.59
PCDHB9Q9Y5E1 Y_RNA.235-201ENST00000364412 102 ntBASIC5.13□□□□□ -1.59
PCDHB9Q9Y5E1 Y_RNA.240-201ENST00000364469 95 ntBASIC5.13□□□□□ -1.59
PCDHB9Q9Y5E1 Y_RNA.306-201ENST00000365015 102 ntBASIC5.13□□□□□ -1.59
PCDHB9Q9Y5E1 Y_RNA.312-201ENST00000365089 102 ntBASIC5.13□□□□□ -1.59
PCDHB9Q9Y5E1 Y_RNA.322-201ENST00000365151 102 ntBASIC5.13□□□□□ -1.59
PCDHB9Q9Y5E1 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDHB9Q9Y5E1 SNORA11-201ENST00000408789 128 ntBASIC5.13□□□□□ -1.59
PCDHB9Q9Y5E1 RN7SKP51-201ENST00000410781 304 ntBASIC5.13□□□□□ -1.59
PCDHB9Q9Y5E1 RNA5SP31-201ENST00000411144 127 ntBASIC5.13□□□□□ -1.59
PCDHB9Q9Y5E1 AL451074.5-201ENST00000415894 435 ntBASIC5.13□□□□□ -1.59
PCDHB9Q9Y5E1 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDHB9Q9Y5E1 HMGN2P27-201ENST00000427352 270 ntBASIC5.13□□□□□ -1.59
PCDHB9Q9Y5E1 AL590383.1-201ENST00000428602 75 ntBASIC5.13□□□□□ -1.59
PCDHB9Q9Y5E1 BX323845.1-201ENST00000432417 179 ntBASIC5.13□□□□□ -1.59
PCDHB9Q9Y5E1 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDHB9Q9Y5E1 AC011753.3-201ENST00000443436 406 ntBASIC5.13□□□□□ -1.59
PCDHB9Q9Y5E1 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDHB9Q9Y5E1 snoU13.24-201ENST00000458998 104 ntBASIC5.13□□□□□ -1.59
PCDHB9Q9Y5E1 Y_RNA.650-201ENST00000459002 102 ntBASIC5.13□□□□□ -1.59
PCDHB9Q9Y5E1 RPL31P13-201ENST00000484151 370 ntBASIC5.13□□□□□ -1.59
PCDHB9Q9Y5E1 RNU6-346P-201ENST00000516288 111 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 191 ms