Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AL592291.1-201ENST00000403830 352 ntBASIC4.86□□□□□ -1.63
NFKB1P19838 MIR1271-201ENST00000408537 86 ntBASIC4.86□□□□□ -1.63
NFKB1P19838 Y_RNA.602-201ENST00000410535 92 ntBASIC4.86□□□□□ -1.63
NFKB1P19838 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.86□□□□□ -1.63
NFKB1P19838 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.86□□□□□ -1.63
NFKB1P19838 CKS1BP5-201ENST00000434172 273 ntBASIC4.86□□□□□ -1.63
NFKB1P19838 PIGFP3-201ENST00000441918 722 ntBASIC4.86□□□□□ -1.63
NFKB1P19838 AL359073.1-201ENST00000448036 403 ntBASIC4.86□□□□□ -1.63
NFKB1P19838 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.86□□□□□ -1.63
NFKB1P19838 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
NFKB1P19838 RNU6-496P-201ENST00000516145 99 ntBASIC4.86□□□□□ -1.63
NFKB1P19838 AF186190.1-201ENST00000517470 480 ntBASIC4.86□□□□□ -1.63
NFKB1P19838 AC025755.1-201ENST00000521306 278 ntBASIC4.86□□□□□ -1.63
NFKB1P19838 CASP1P1-201ENST00000526345 212 ntBASIC4.86□□□□□ -1.63
NFKB1P19838 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.86□□□□□ -1.63
NFKB1P19838 MIR548AI-201ENST00000579940 88 ntBASIC4.86□□□□□ -1.63
NFKB1P19838 AC011487.3-201ENST00000593607 453 ntBASIC4.86□□□□□ -1.63
NFKB1P19838 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.86□□□□□ -1.63
NFKB1P19838 SRGNP1-201ENST00000603392 451 ntBASIC4.86□□□□□ -1.63
NFKB1P19838 AC073657.2-201ENST00000605661 303 ntBASIC4.86□□□□□ -1.63
NFKB1P19838 FAM27B-201ENST00000610601 213 ntBASIC4.86□□□□□ -1.63
NFKB1P19838 AC087385.3-201ENST00000620477 187 ntBASIC4.86□□□□□ -1.63
NFKB1P19838 AP001642.1-201ENST00000624727 2117 ntBASIC4.86□□□□□ -1.63
NFKB1P19838 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NFKB1P19838 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NFKB1P19838 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.86□□□□□ -1.63
NFKB1P19838 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.86□□□□□ -1.63
NFKB1P19838 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
NFKB1P19838 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
NFKB1P19838 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NFKB1P19838 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
NFKB1P19838 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
NFKB1P19838 DHX9P1-201ENST00000436565 3076 ntBASIC4.86□□□□□ -1.63
NFKB1P19838 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
NFKB1P19838 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NFKB1P19838 RNA5SP191-201ENST00000362585 102 ntBASIC4.85□□□□□ -1.63
NFKB1P19838 Y_RNA.76-201ENST00000362931 109 ntBASIC4.85□□□□□ -1.63
NFKB1P19838 RNU6-102P-201ENST00000384485 104 ntBASIC4.85□□□□□ -1.63
NFKB1P19838 RNU1-82P-201ENST00000390851 165 ntBASIC4.85□□□□□ -1.63
NFKB1P19838 COX6B1P1-201ENST00000415962 213 ntBASIC4.85□□□□□ -1.63
NFKB1P19838 COX6CP10-201ENST00000416832 224 ntBASIC4.85□□□□□ -1.63
NFKB1P19838 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.85□□□□□ -1.63
NFKB1P19838 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.85□□□□□ -1.63
NFKB1P19838 RNU7-87P-201ENST00000459343 62 ntBASIC4.85□□□□□ -1.63
NFKB1P19838 RPS29P27-201ENST00000463711 170 ntBASIC4.85□□□□□ -1.63
NFKB1P19838 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.85□□□□□ -1.63
NFKB1P19838 SEPT14P8-201ENST00000508026 178 ntBASIC4.85□□□□□ -1.63
NFKB1P19838 AC091868.1-201ENST00000508746 304 ntBASIC4.85□□□□□ -1.63
NFKB1P19838 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.85□□□□□ -1.63
NFKB1P19838 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.85□□□□□ -1.63
NFKB1P19838 Y_RNA.706-201ENST00000516933 99 ntBASIC4.85□□□□□ -1.63
NFKB1P19838 AC109479.2-201ENST00000517842 174 ntBASIC4.85□□□□□ -1.63
NFKB1P19838 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.85□□□□□ -1.63
NFKB1P19838 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.85□□□□□ -1.63
NFKB1P19838 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.85□□□□□ -1.63
NFKB1P19838 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.85□□□□□ -1.63
NFKB1P19838 MRPS36P4-201ENST00000534436 298 ntBASIC4.85□□□□□ -1.63
NFKB1P19838 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.85□□□□□ -1.63
NFKB1P19838 EDDM3DP-201ENST00000554692 434 ntBASIC4.85□□□□□ -1.63
NFKB1P19838 AC044860.2-201ENST00000561005 179 ntBASIC4.85□□□□□ -1.63
NFKB1P19838 AC022968.1-201ENST00000567372 442 ntBASIC4.85□□□□□ -1.63
NFKB1P19838 AC120057.2-201ENST00000571520 271 ntBASIC4.85□□□□□ -1.63
NFKB1P19838 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.85□□□□□ -1.63
NFKB1P19838 RPL23AP78-201ENST00000599928 470 ntBASIC4.85□□□□□ -1.63
NFKB1P19838 Z83818.1-201ENST00000603584 150 ntBASIC4.85□□□□□ -1.63
NFKB1P19838 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.85□□□□□ -1.63
NFKB1P19838 AL161629.2-201ENST00000615347 275 ntBASIC4.85□□□□□ -1.63
NFKB1P19838 AC240442.1-201ENST00000616055 283 ntBASIC4.85□□□□□ -1.63
NFKB1P19838 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NFKB1P19838 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
NFKB1P19838 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NFKB1P19838 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.85□□□□□ -1.63
NFKB1P19838 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.85□□□□□ -1.63
NFKB1P19838 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.85□□□□□ -1.63
NFKB1P19838 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NFKB1P19838 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NFKB1P19838 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NFKB1P19838 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
NFKB1P19838 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NFKB1P19838 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NFKB1P19838 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.84□□□□□ -1.63
NFKB1P19838 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.84□□□□□ -1.63
NFKB1P19838 RNU6-290P-201ENST00000365212 101 ntBASIC4.84□□□□□ -1.63
NFKB1P19838 AL022722.2-201ENST00000402519 180 ntBASIC4.84□□□□□ -1.63
NFKB1P19838 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.84□□□□□ -1.63
NFKB1P19838 AC017079.2-201ENST00000416102 485 ntBASIC4.84□□□□□ -1.63
NFKB1P19838 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.84□□□□□ -1.63
NFKB1P19838 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.84□□□□□ -1.63
NFKB1P19838 TDGF1P1-201ENST00000445734 527 ntBASIC4.84□□□□□ -1.63
NFKB1P19838 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.84□□□□□ -1.63
NFKB1P19838 U8.22-201ENST00000459141 133 ntBASIC4.84□□□□□ -1.63
NFKB1P19838 AC034236.1-201ENST00000469891 373 ntBASIC4.84□□□□□ -1.63
NFKB1P19838 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.84□□□□□ -1.63
NFKB1P19838 ANXA2P1-201ENST00000505539 926 ntBASIC4.84□□□□□ -1.63
NFKB1P19838 AK3P2-201ENST00000507976 429 ntBASIC4.84□□□□□ -1.63
NFKB1P19838 RNU6-1012P-201ENST00000516606 109 ntBASIC4.84□□□□□ -1.63
NFKB1P19838 HMGB1P14-201ENST00000557424 591 ntBASIC4.84□□□□□ -1.63
NFKB1P19838 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.84□□□□□ -1.63
NFKB1P19838 AC002545.1-201ENST00000592511 181 ntBASIC4.84□□□□□ -1.63
NFKB1P19838 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 247.2 ms