Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 RNU6-1286P-201ENST00000383871 107 ntBASIC6.94□□□□□ -1.3
CCDC61Q9Y6R9 MIR10A-201ENST00000385043 110 ntBASIC6.94□□□□□ -1.3
CCDC61Q9Y6R9 SNORA40.5-201ENST00000391061 128 ntBASIC6.94□□□□□ -1.3
CCDC61Q9Y6R9 HLFP1-201ENST00000402375 499 ntBASIC6.94□□□□□ -1.3
CCDC61Q9Y6R9 EIF4EBP2P3-201ENST00000403144 334 ntBASIC6.94□□□□□ -1.3
CCDC61Q9Y6R9 AL627311.1-201ENST00000431514 115 ntBASIC6.94□□□□□ -1.3
CCDC61Q9Y6R9 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.94□□□□□ -1.3
CCDC61Q9Y6R9 Y_RNA.637-201ENST00000459424 114 ntBASIC6.94□□□□□ -1.3
CCDC61Q9Y6R9 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC61Q9Y6R9 RN7SL481P-201ENST00000477764 299 ntBASIC6.94□□□□□ -1.3
CCDC61Q9Y6R9 ENSA-210ENST00000503241 574 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC61Q9Y6R9 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC61Q9Y6R9 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC61Q9Y6R9 RFPL4AP5-201ENST00000514977 504 ntBASIC6.94□□□□□ -1.3
CCDC61Q9Y6R9 AL358913.1-201ENST00000554342 121 ntBASIC6.94□□□□□ -1.3
CCDC61Q9Y6R9 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.94□□□□□ -1.3
CCDC61Q9Y6R9 MIR4782-201ENST00000577987 79 ntBASIC6.94□□□□□ -1.3
CCDC61Q9Y6R9 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.94□□□□□ -1.3
CCDC61Q9Y6R9 AC092628.2-201ENST00000622492 339 ntBASIC6.94□□□□□ -1.3
CCDC61Q9Y6R9 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC61Q9Y6R9 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC6.94□□□□□ -1.3
CCDC61Q9Y6R9 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
CCDC61Q9Y6R9 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC61Q9Y6R9 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC61Q9Y6R9 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.93□□□□□ -1.3
CCDC61Q9Y6R9 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.93□□□□□ -1.3
CCDC61Q9Y6R9 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC61Q9Y6R9 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CCDC61Q9Y6R9 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
CCDC61Q9Y6R9 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
CCDC61Q9Y6R9 Y_RNA.319-201ENST00000365138 92 ntBASIC6.93□□□□□ -1.3
CCDC61Q9Y6R9 RPS29P9-201ENST00000440360 171 ntBASIC6.93□□□□□ -1.3
CCDC61Q9Y6R9 RN7SKP122-201ENST00000515923 296 ntBASIC6.93□□□□□ -1.3
CCDC61Q9Y6R9 IGKV2D-36-201ENST00000518643 226 ntBASIC6.93□□□□□ -1.3
CCDC61Q9Y6R9 Y_RNA.757-201ENST00000578934 114 ntBASIC6.93□□□□□ -1.3
CCDC61Q9Y6R9 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC61Q9Y6R9 AL353748.2-201ENST00000622148 471 ntBASIC6.93□□□□□ -1.3
CCDC61Q9Y6R9 AP001642.1-201ENST00000624727 2117 ntBASIC6.93□□□□□ -1.3
CCDC61Q9Y6R9 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.93□□□□□ -1.3
CCDC61Q9Y6R9 AL034408.1-202ENST00000636088 415 ntBASIC6.93□□□□□ -1.3
CCDC61Q9Y6R9 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
CCDC61Q9Y6R9 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC61Q9Y6R9 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC61Q9Y6R9 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCDC61Q9Y6R9 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
CCDC61Q9Y6R9 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC61Q9Y6R9 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC61Q9Y6R9 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC61Q9Y6R9 RNU6-407P-201ENST00000365280 104 ntBASIC6.92□□□□□ -1.3
CCDC61Q9Y6R9 ENSAP1-201ENST00000392855 326 ntBASIC6.92□□□□□ -1.3
CCDC61Q9Y6R9 RPL21P67-201ENST00000402896 478 ntBASIC6.92□□□□□ -1.3
CCDC61Q9Y6R9 RNU4-64P-201ENST00000410795 131 ntBASIC6.92□□□□□ -1.3
CCDC61Q9Y6R9 EIF1AXP1-201ENST00000419267 435 ntBASIC6.92□□□□□ -1.3
CCDC61Q9Y6R9 AC099670.2-201ENST00000435130 321 ntBASIC6.92□□□□□ -1.3
CCDC61Q9Y6R9 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC6.92□□□□□ -1.3
CCDC61Q9Y6R9 AC087588.1-201ENST00000462203 316 ntBASIC6.92□□□□□ -1.3
CCDC61Q9Y6R9 RN7SL197P-201ENST00000466981 299 ntBASIC6.92□□□□□ -1.3
CCDC61Q9Y6R9 KRTAP5-14P-201ENST00000502328 121 ntBASIC6.92□□□□□ -1.3
CCDC61Q9Y6R9 BTF3L4P4-201ENST00000506381 449 ntBASIC6.92□□□□□ -1.3
CCDC61Q9Y6R9 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC61Q9Y6R9 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC6.92□□□□□ -1.3
CCDC61Q9Y6R9 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC6.92□□□□□ -1.3
CCDC61Q9Y6R9 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.92□□□□□ -1.3
CCDC61Q9Y6R9 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC61Q9Y6R9 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
CCDC61Q9Y6R9 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
CCDC61Q9Y6R9 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
CCDC61Q9Y6R9 THAP12P5-201ENST00000405864 2275 ntBASIC6.92□□□□□ -1.3
CCDC61Q9Y6R9 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC61Q9Y6R9 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.91□□□□□ -1.3
CCDC61Q9Y6R9 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC61Q9Y6R9 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC61Q9Y6R9 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC61Q9Y6R9 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC61Q9Y6R9 AC126755.2-208ENST00000327792 462 ntBASIC6.91□□□□□ -1.3
CCDC61Q9Y6R9 AC138969.1-213ENST00000331436 462 ntBASIC6.91□□□□□ -1.3
CCDC61Q9Y6R9 AC092017.2-201ENST00000427600 362 ntBASIC6.91□□□□□ -1.3
CCDC61Q9Y6R9 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC6.91□□□□□ -1.3
CCDC61Q9Y6R9 AC138761.5-201ENST00000433967 325 ntBASIC6.91□□□□□ -1.3
CCDC61Q9Y6R9 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6.91□□□□□ -1.3
CCDC61Q9Y6R9 AURKAPS2-201ENST00000454983 333 ntBASIC6.91□□□□□ -1.3
CCDC61Q9Y6R9 SNORD33.1-201ENST00000516213 88 ntBASIC6.91□□□□□ -1.3
CCDC61Q9Y6R9 AC136777.2-201ENST00000522979 358 ntBASIC6.91□□□□□ -1.3
CCDC61Q9Y6R9 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC6.91□□□□□ -1.3
CCDC61Q9Y6R9 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC6.91□□□□□ -1.3
CCDC61Q9Y6R9 AC106754.2-201ENST00000623006 233 ntBASIC6.91□□□□□ -1.3
CCDC61Q9Y6R9 AC000095.2-202ENST00000637415 154 ntBASIC6.91□□□□□ -1.3
CCDC61Q9Y6R9 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC61Q9Y6R9 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.91□□□□□ -1.3
CCDC61Q9Y6R9 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC61Q9Y6R9 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.9□□□□□ -1.3
CCDC61Q9Y6R9 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC61Q9Y6R9 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.9□□□□□ -1.3
CCDC61Q9Y6R9 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC6.9□□□□□ -1.3
CCDC61Q9Y6R9 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC61Q9Y6R9 RNU6-137P-201ENST00000363680 108 ntBASIC6.9□□□□□ -1.3
CCDC61Q9Y6R9 MIR34A-201ENST00000385130 110 ntBASIC6.9□□□□□ -1.3
CCDC61Q9Y6R9 SNORA48.4-201ENST00000391089 134 ntBASIC6.9□□□□□ -1.3
CCDC61Q9Y6R9 RPL19P16-201ENST00000433839 588 ntBASIC6.9□□□□□ -1.3
CCDC61Q9Y6R9 EEF1A1P1-201ENST00000447052 739 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms