Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 RPL9P7-201ENST00000330965 580 ntBASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 SNORA31-201ENST00000362607 130 ntBASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 Y_RNA.401-201ENST00000383965 117 ntBASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 Y_RNA.455-201ENST00000384230 98 ntBASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 RNU11-201ENST00000387069 134 ntBASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 RN7SKP16-201ENST00000410180 299 ntBASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 Z92545.1-201ENST00000411782 234 ntBASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 AL592148.1-201ENST00000413568 445 ntBASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 PGBD4P6-201ENST00000421501 610 ntBASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 AC096644.2-201ENST00000429278 159 ntBASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 AL513043.1-201ENST00000439124 535 ntBASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 RPL9P9-202ENST00000466501 579 ntBASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 AC093815.1-201ENST00000508637 280 ntBASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 RNU6-1137P-201ENST00000517073 99 ntBASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 AL360012.1-201ENST00000602813 131 ntBASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 AC006363.1-201ENST00000603806 463 ntBASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 AC123912.5-201ENST00000605470 343 ntBASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 AL121917.1-203ENST00000605534 577 ntBASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 AL158196.1-201ENST00000616786 434 ntBASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 AC087588.2-201ENST00000617667 426 ntBASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 AL359922.3-201ENST00000624779 1670 ntBASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 AC005005.4-201ENST00000623789 16698 ntBASIC5.2□□□□□ -1.58
TMEM88BA6NKF7 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 AC118273.1-201ENST00000525324 3006 ntBASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 RNU6-384P-201ENST00000364900 104 ntBASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 Y_RNA.424-201ENST00000384063 103 ntBASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 Y_RNA.577-201ENST00000384794 101 ntBASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 SNORA40C-201ENST00000391285 128 ntBASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 AP000580.1-201ENST00000404439 358 ntBASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 RNU6-101P-201ENST00000410323 104 ntBASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 RNU2-23P-201ENST00000410545 195 ntBASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 SNORD56-201ENST00000413522 71 ntBASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 AC093151.1-201ENST00000427711 313 ntBASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 SNRPEP9-201ENST00000436794 238 ntBASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 AP000873.1-201ENST00000463987 400 ntBASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 AC104164.2-201ENST00000496953 495 ntBASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 MTCO2P24-201ENST00000515611 426 ntBASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 RNU6-572P-201ENST00000516724 80 ntBASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 AC107016.1-201ENST00000550463 337 ntBASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 AL359219.2-201ENST00000555184 348 ntBASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 AC004817.2-201ENST00000561794 651 ntBASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 MIR3124-201ENST00000582636 67 ntBASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 AL355598.1-201ENST00000604169 202 ntBASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 AC004805.2-201ENST00000605382 482 ntBASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 USP8P1-201ENST00000494673 3183 ntBASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.19□□□□□ -1.58
TMEM88BA6NKF7 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TMEM88BA6NKF7 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TMEM88BA6NKF7 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.18□□□□□ -1.58
TMEM88BA6NKF7 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.18□□□□□ -1.58
TMEM88BA6NKF7 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
TMEM88BA6NKF7 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TMEM88BA6NKF7 RNA5SP453-201ENST00000362503 119 ntBASIC5.18□□□□□ -1.58
TMEM88BA6NKF7 Y_RNA.152-201ENST00000363578 100 ntBASIC5.18□□□□□ -1.58
TMEM88BA6NKF7 Y_RNA.176-201ENST00000363815 109 ntBASIC5.18□□□□□ -1.58
TMEM88BA6NKF7 Y_RNA.314-201ENST00000365114 102 ntBASIC5.18□□□□□ -1.58
TMEM88BA6NKF7 Y_RNA.389-201ENST00000383924 113 ntBASIC5.18□□□□□ -1.58
TMEM88BA6NKF7 Y_RNA.527-201ENST00000384573 102 ntBASIC5.18□□□□□ -1.58
TMEM88BA6NKF7 RNU6-1197P-201ENST00000391183 107 ntBASIC5.18□□□□□ -1.58
TMEM88BA6NKF7 PTMAP5-201ENST00000393073 333 ntBASIC5.18□□□□□ -1.58
TMEM88BA6NKF7 AL591034.2-201ENST00000402839 359 ntBASIC5.18□□□□□ -1.58
TMEM88BA6NKF7 UBE2Q2P12-201ENST00000414573 204 ntBASIC5.18□□□□□ -1.58
TMEM88BA6NKF7 AC243428.1-201ENST00000421099 264 ntBASIC5.18□□□□□ -1.58
TMEM88BA6NKF7 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC5.18□□□□□ -1.58
TMEM88BA6NKF7 MTCYBP9-201ENST00000431021 303 ntBASIC5.18□□□□□ -1.58
TMEM88BA6NKF7 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.18□□□□□ -1.58
TMEM88BA6NKF7 AC004938.1-201ENST00000438468 308 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 255.6 ms