Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 AC090132.2-201ENST00000615881 347 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 AC108479.2-201ENST00000617314 601 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 U6.42-201ENST00000618440 107 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 AC138649.3-201ENST00000622154 254 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 CR381653.2-201ENST00000624041 768 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 AC124864.2-201ENST00000624736 186 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 ELF2P3-201ENST00000445099 1506 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 AC110774.1-201ENST00000623567 2018 ntBASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.32□□□□□ -1.88
DDX43Q9NXZ2 TPTE2P4-201ENST00000258589 1605 ntBASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 GNG5P1-201ENST00000255500 204 ntBASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 Y_RNA.111-201ENST00000363248 100 ntBASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 U3.6-201ENST00000363622 211 ntBASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 RNU6-853P-201ENST00000364306 107 ntBASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 MIR514A1-201ENST00000385133 98 ntBASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 U3.20-201ENST00000390909 217 ntBASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 RN7SKP123-201ENST00000410732 291 ntBASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 AC018630.2-202ENST00000422992 927 ntBASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 RPL7L1P10-201ENST00000427790 463 ntBASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 AC000111.3-201ENST00000433478 193 ntBASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 AP000542.1-201ENST00000448473 371 ntBASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 MTCO1P42-201ENST00000457379 726 ntBASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 AC013267.1-201ENST00000458227 267 ntBASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 AC034222.1-201ENST00000494052 532 ntBASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 FAM92A1P2-202ENST00000504766 877 ntBASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 AC010265.1-201ENST00000513509 211 ntBASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 SNORA18.6-201ENST00000516792 115 ntBASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 SCARNA20.6-201ENST00000517251 106 ntBASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 MTND4LP18-201ENST00000526864 291 ntBASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 SNORA59B-202ENST00000578183 701 ntBASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 MIR3609-201ENST00000582661 80 ntBASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 MIR4506-201ENST00000584693 77 ntBASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 AL591516.1-201ENST00000611326 274 ntBASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 AC091304.9-201ENST00000612091 226 ntBASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 AC008250.2-201ENST00000615261 205 ntBASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 AL603758.1-201ENST00000618654 241 ntBASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 AC079597.1-201ENST00000624306 508 ntBASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 MAPK10-362ENST00000641864 4484 ntBASIC3.31□□□□□ -1.88
DDX43Q9NXZ2 MTND5P19-201ENST00000424872 1794 ntBASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 U8.3-201ENST00000363321 132 ntBASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 SNORD67-201ENST00000390833 111 ntBASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 SNORA48.8-201ENST00000391324 134 ntBASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 CIR1P3-201ENST00000405137 479 ntBASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 AL138885.1-201ENST00000405921 675 ntBASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 MTCO1P17-201ENST00000411522 491 ntBASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 C1DP2-201ENST00000418167 426 ntBASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 TAAR7P-201ENST00000436141 242 ntBASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 AC009237.8-201ENST00000445492 379 ntBASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 GAPDHP27-201ENST00000447427 1020 ntBASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 RPS3AP17-201ENST00000472594 777 ntBASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 SCARNA15.2-201ENST00000516409 127 ntBASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 RNU6-314P-201ENST00000516574 104 ntBASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 RNU6-1003P-201ENST00000517099 105 ntBASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 AP003467.2-201ENST00000520175 319 ntBASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 HMGN1P28-201ENST00000521340 364 ntBASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 PSMA2P1-201ENST00000526365 646 ntBASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 SETP2-201ENST00000553886 926 ntBASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 RPL21P5-201ENST00000554662 472 ntBASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 AC103710.1-201ENST00000610003 901 ntBASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 AC090970.3-201ENST00000612566 866 ntBASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
DDX43Q9NXZ2 AC103988.1-201ENST00000566382 2177 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms