Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.96□□□□□ -1.78
PNKPQ96T60 AC091286.1-201ENST00000431233 461 ntBASIC3.96□□□□□ -1.78
PNKPQ96T60 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.96□□□□□ -1.78
PNKPQ96T60 AC090774.1-201ENST00000435925 246 ntBASIC3.96□□□□□ -1.78
PNKPQ96T60 CYCSP43-201ENST00000438233 310 ntBASIC3.96□□□□□ -1.78
PNKPQ96T60 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.96□□□□□ -1.78
PNKPQ96T60 AL133162.1-201ENST00000463228 453 ntBASIC3.96□□□□□ -1.78
PNKPQ96T60 AC110768.1-201ENST00000509222 400 ntBASIC3.96□□□□□ -1.78
PNKPQ96T60 SNORA19.2-201ENST00000516013 114 ntBASIC3.96□□□□□ -1.78
PNKPQ96T60 RNA5SP164-201ENST00000516533 110 ntBASIC3.96□□□□□ -1.78
PNKPQ96T60 SCARNA14-201ENST00000516903 136 ntBASIC3.96□□□□□ -1.78
PNKPQ96T60 RNU4-60P-201ENST00000517239 135 ntBASIC3.96□□□□□ -1.78
PNKPQ96T60 MTND4P7-201ENST00000523876 130 ntBASIC3.96□□□□□ -1.78
PNKPQ96T60 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.96□□□□□ -1.78
PNKPQ96T60 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PNKPQ96T60 AC011602.1-201ENST00000546484 331 ntBASIC3.96□□□□□ -1.78
PNKPQ96T60 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.96□□□□□ -1.78
PNKPQ96T60 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.96□□□□□ -1.78
PNKPQ96T60 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.96□□□□□ -1.78
PNKPQ96T60 AC010928.3-201ENST00000587712 541 ntBASIC3.96□□□□□ -1.78
PNKPQ96T60 HMGN2P28-201ENST00000606102 262 ntBASIC3.96□□□□□ -1.78
PNKPQ96T60 AC103710.3-201ENST00000608157 948 ntBASIC3.96□□□□□ -1.78
PNKPQ96T60 AC092807.2-201ENST00000609367 243 ntBASIC3.96□□□□□ -1.78
PNKPQ96T60 AC069200.1-201ENST00000609511 323 ntBASIC3.96□□□□□ -1.78
PNKPQ96T60 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.96□□□□□ -1.78
PNKPQ96T60 AC004825.2-201ENST00000616634 455 ntBASIC3.96□□□□□ -1.78
PNKPQ96T60 uc_338.11-201ENST00000619132 160 ntBASIC3.96□□□□□ -1.78
PNKPQ96T60 AL160413.1-201ENST00000622780 310 ntBASIC3.96□□□□□ -1.78
PNKPQ96T60 BMS1P21-201ENST00000634565 365 ntBASIC3.96□□□□□ -1.78
PNKPQ96T60 AC009093.8-201ENST00000641769 292 ntBASIC3.96□□□□□ -1.78
PNKPQ96T60 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PNKPQ96T60 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PNKPQ96T60 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PNKPQ96T60 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.96□□□□□ -1.78
PNKPQ96T60 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PNKPQ96T60 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PNKPQ96T60 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PNKPQ96T60 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.95□□□□□ -1.78
PNKPQ96T60 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PNKPQ96T60 XIAPP3-201ENST00000312918 795 ntBASIC3.95□□□□□ -1.78
PNKPQ96T60 SNORA63.1-201ENST00000362493 131 ntBASIC3.95□□□□□ -1.78
PNKPQ96T60 MIR199A2-201ENST00000385289 110 ntBASIC3.95□□□□□ -1.78
PNKPQ96T60 RNU2-43P-201ENST00000410306 190 ntBASIC3.95□□□□□ -1.78
PNKPQ96T60 RPS12P23-201ENST00000419579 400 ntBASIC3.95□□□□□ -1.78
PNKPQ96T60 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.95□□□□□ -1.78
PNKPQ96T60 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.95□□□□□ -1.78
PNKPQ96T60 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.95□□□□□ -1.78
PNKPQ96T60 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.95□□□□□ -1.78
PNKPQ96T60 AC020550.1-201ENST00000447385 163 ntBASIC3.95□□□□□ -1.78
PNKPQ96T60 HMGB3P8-201ENST00000449709 577 ntBASIC3.95□□□□□ -1.78
PNKPQ96T60 MTND4P17-201ENST00000470444 350 ntBASIC3.95□□□□□ -1.78
PNKPQ96T60 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.95□□□□□ -1.78
PNKPQ96T60 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.95□□□□□ -1.78
PNKPQ96T60 RPL23AP55-201ENST00000498163 452 ntBASIC3.95□□□□□ -1.78
PNKPQ96T60 UBE2CP3-201ENST00000502715 450 ntBASIC3.95□□□□□ -1.78
PNKPQ96T60 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.95□□□□□ -1.78
PNKPQ96T60 AC117522.3-201ENST00000507974 584 ntBASIC3.95□□□□□ -1.78
PNKPQ96T60 SCARNA15.1-201ENST00000516384 125 ntBASIC3.95□□□□□ -1.78
PNKPQ96T60 Y_RNA.691-201ENST00000516611 103 ntBASIC3.95□□□□□ -1.78
PNKPQ96T60 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.95□□□□□ -1.78
PNKPQ96T60 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.95□□□□□ -1.78
PNKPQ96T60 AL137161.1-201ENST00000532231 390 ntBASIC3.95□□□□□ -1.78
PNKPQ96T60 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.95□□□□□ -1.78
PNKPQ96T60 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.95□□□□□ -1.78
PNKPQ96T60 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.95□□□□□ -1.78
PNKPQ96T60 AL670379.6-201ENST00000603753 252 ntBASIC3.95□□□□□ -1.78
PNKPQ96T60 AL670379.11-201ENST00000604059 253 ntBASIC3.95□□□□□ -1.78
PNKPQ96T60 AC008162.1-201ENST00000604718 254 ntBASIC3.95□□□□□ -1.78
PNKPQ96T60 AL670379.1-201ENST00000604752 252 ntBASIC3.95□□□□□ -1.78
PNKPQ96T60 AL670379.5-201ENST00000605253 252 ntBASIC3.95□□□□□ -1.78
PNKPQ96T60 AL670379.12-201ENST00000605291 253 ntBASIC3.95□□□□□ -1.78
PNKPQ96T60 AL670379.8-201ENST00000605353 252 ntBASIC3.95□□□□□ -1.78
PNKPQ96T60 AL670379.7-201ENST00000605823 252 ntBASIC3.95□□□□□ -1.78
PNKPQ96T60 AC006065.5-201ENST00000623427 349 ntBASIC3.95□□□□□ -1.78
PNKPQ96T60 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.95□□□□□ -1.78
PNKPQ96T60 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
PNKPQ96T60 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.95□□□□□ -1.78
PNKPQ96T60 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
PNKPQ96T60 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.95□□□□□ -1.78
PNKPQ96T60 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PNKPQ96T60 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PNKPQ96T60 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PNKPQ96T60 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PNKPQ96T60 MIR208A-201ENST00000362287 71 ntBASIC3.94□□□□□ -1.78
PNKPQ96T60 Y_RNA.167-201ENST00000363735 109 ntBASIC3.94□□□□□ -1.78
PNKPQ96T60 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PNKPQ96T60 RNU6-550P-201ENST00000391057 101 ntBASIC3.94□□□□□ -1.78
PNKPQ96T60 NDUFS5P1-201ENST00000405668 289 ntBASIC3.94□□□□□ -1.78
PNKPQ96T60 AC093578.1-201ENST00000415219 368 ntBASIC3.94□□□□□ -1.78
PNKPQ96T60 AL354751.2-201ENST00000415471 210 ntBASIC3.94□□□□□ -1.78
PNKPQ96T60 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.94□□□□□ -1.78
PNKPQ96T60 PPP1R11P2-201ENST00000423543 382 ntBASIC3.94□□□□□ -1.78
PNKPQ96T60 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.94□□□□□ -1.78
PNKPQ96T60 AL162388.1-201ENST00000450912 352 ntBASIC3.94□□□□□ -1.78
PNKPQ96T60 RNU6-1208P-201ENST00000459588 107 ntBASIC3.94□□□□□ -1.78
PNKPQ96T60 RPL23AP14-201ENST00000468281 468 ntBASIC3.94□□□□□ -1.78
PNKPQ96T60 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.94□□□□□ -1.78
PNKPQ96T60 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.94□□□□□ -1.78
PNKPQ96T60 RN7SKP60-201ENST00000516985 239 ntBASIC3.94□□□□□ -1.78
PNKPQ96T60 AC022695.1-201ENST00000522089 237 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 159 ms