Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
KLF4O43474 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
KLF4O43474 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
KLF4O43474 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
KLF4O43474 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
KLF4O43474 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.26□□□□□ -1.73
KLF4O43474 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
KLF4O43474 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
KLF4O43474 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
KLF4O43474 RNU1-32P-201ENST00000363937 159 ntBASIC4.25□□□□□ -1.73
KLF4O43474 RNA5SP151-201ENST00000365632 117 ntBASIC4.25□□□□□ -1.73
KLF4O43474 Y_RNA.394-201ENST00000383942 103 ntBASIC4.25□□□□□ -1.73
KLF4O43474 Y_RNA.445-201ENST00000384168 102 ntBASIC4.25□□□□□ -1.73
KLF4O43474 RNU6-306P-201ENST00000384617 107 ntBASIC4.25□□□□□ -1.73
KLF4O43474 MIR548P-201ENST00000408336 84 ntBASIC4.25□□□□□ -1.73
KLF4O43474 Y_RNA.594-201ENST00000410373 140 ntBASIC4.25□□□□□ -1.73
KLF4O43474 RN7SKP106-201ENST00000410832 272 ntBASIC4.25□□□□□ -1.73
KLF4O43474 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.25□□□□□ -1.73
KLF4O43474 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
KLF4O43474 AC079168.2-201ENST00000453977 416 ntBASIC4.25□□□□□ -1.73
KLF4O43474 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.25□□□□□ -1.73
KLF4O43474 AC008571.1-201ENST00000467232 300 ntBASIC4.25□□□□□ -1.73
KLF4O43474 RPL23AP45-201ENST00000476406 468 ntBASIC4.25□□□□□ -1.73
KLF4O43474 AC114801.2-201ENST00000503825 781 ntBASIC4.25□□□□□ -1.73
KLF4O43474 SCARNA22-201ENST00000503991 125 ntBASIC4.25□□□□□ -1.73
KLF4O43474 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.25□□□□□ -1.73
KLF4O43474 AC026782.1-201ENST00000512952 449 ntBASIC4.25□□□□□ -1.73
KLF4O43474 RNU6-377P-201ENST00000515965 102 ntBASIC4.25□□□□□ -1.73
KLF4O43474 ACA59.1-201ENST00000515966 143 ntBASIC4.25□□□□□ -1.73
KLF4O43474 RNU6-928P-201ENST00000516876 104 ntBASIC4.25□□□□□ -1.73
KLF4O43474 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.25□□□□□ -1.73
KLF4O43474 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.25□□□□□ -1.73
KLF4O43474 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.25□□□□□ -1.73
KLF4O43474 AC133555.2-201ENST00000550213 292 ntBASIC4.25□□□□□ -1.73
KLF4O43474 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.25□□□□□ -1.73
KLF4O43474 AC008962.1-201ENST00000605729 304 ntBASIC4.25□□□□□ -1.73
KLF4O43474 AC023043.4-201ENST00000612081 449 ntBASIC4.25□□□□□ -1.73
KLF4O43474 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
KLF4O43474 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
KLF4O43474 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.24□□□□□ -1.73
KLF4O43474 AC007656.2-201ENST00000624902 4547 ntBASIC4.24□□□□□ -1.73
KLF4O43474 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KLF4O43474 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
KLF4O43474 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
KLF4O43474 MIR369-201ENST00000362155 70 ntBASIC4.24□□□□□ -1.73
KLF4O43474 RNU6-778P-201ENST00000363269 103 ntBASIC4.24□□□□□ -1.73
KLF4O43474 Y_RNA.138-201ENST00000363462 102 ntBASIC4.24□□□□□ -1.73
KLF4O43474 Y_RNA.151-201ENST00000363566 112 ntBASIC4.24□□□□□ -1.73
KLF4O43474 Y_RNA.197-201ENST00000364004 102 ntBASIC4.24□□□□□ -1.73
KLF4O43474 SNORD42.2-201ENST00000365570 69 ntBASIC4.24□□□□□ -1.73
KLF4O43474 RNU6-310P-201ENST00000384655 107 ntBASIC4.24□□□□□ -1.73
KLF4O43474 MIR559-201ENST00000385188 96 ntBASIC4.24□□□□□ -1.73
KLF4O43474 RNU1-82P-201ENST00000390851 165 ntBASIC4.24□□□□□ -1.73
KLF4O43474 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.24□□□□□ -1.73
KLF4O43474 MIR298-201ENST00000401212 88 ntBASIC4.24□□□□□ -1.73
KLF4O43474 U3.37-201ENST00000408528 213 ntBASIC4.24□□□□□ -1.73
KLF4O43474 AC009237.10-201ENST00000414112 510 ntBASIC4.24□□□□□ -1.73
KLF4O43474 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.24□□□□□ -1.73
KLF4O43474 AC005154.2-201ENST00000438110 379 ntBASIC4.24□□□□□ -1.73
KLF4O43474 SNORA71B-202ENST00000439232 272 ntBASIC4.24□□□□□ -1.73
KLF4O43474 MTCYBP6-201ENST00000441810 138 ntBASIC4.24□□□□□ -1.73
KLF4O43474 HIGD1AP2-201ENST00000446367 280 ntBASIC4.24□□□□□ -1.73
KLF4O43474 RPS5P7-201ENST00000456664 608 ntBASIC4.24□□□□□ -1.73
KLF4O43474 RPL26P9-201ENST00000457466 433 ntBASIC4.24□□□□□ -1.73
KLF4O43474 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.24□□□□□ -1.73
KLF4O43474 AC010326.1-201ENST00000462726 602 ntBASIC4.24□□□□□ -1.73
KLF4O43474 RPL23AP65-201ENST00000475608 468 ntBASIC4.24□□□□□ -1.73
KLF4O43474 PPIAP15-201ENST00000479662 484 ntBASIC4.24□□□□□ -1.73
KLF4O43474 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.24□□□□□ -1.73
KLF4O43474 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.24□□□□□ -1.73
KLF4O43474 SMURF2P1-201ENST00000514992 481 ntBASIC4.24□□□□□ -1.73
KLF4O43474 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.24□□□□□ -1.73
KLF4O43474 AP003072.1-201ENST00000531740 145 ntBASIC4.24□□□□□ -1.73
KLF4O43474 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.24□□□□□ -1.73
KLF4O43474 H3F3AP1-201ENST00000559984 334 ntBASIC4.24□□□□□ -1.73
KLF4O43474 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.24□□□□□ -1.73
KLF4O43474 FAM27B-201ENST00000610601 213 ntBASIC4.24□□□□□ -1.73
KLF4O43474 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.24□□□□□ -1.73
KLF4O43474 AL161629.2-201ENST00000615347 275 ntBASIC4.24□□□□□ -1.73
KLF4O43474 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.24□□□□□ -1.73
KLF4O43474 U2.21-201ENST00000637295 81 ntBASIC4.24□□□□□ -1.73
KLF4O43474 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KLF4O43474 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KLF4O43474 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KLF4O43474 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.24□□□□□ -1.73
KLF4O43474 MTND5P19-201ENST00000424872 1794 ntBASIC4.24□□□□□ -1.73
KLF4O43474 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KLF4O43474 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.24□□□□□ -1.73
KLF4O43474 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.24□□□□□ -1.73
KLF4O43474 AL133243.3-201ENST00000617415 3004 ntBASIC4.24□□□□□ -1.73
KLF4O43474 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KLF4O43474 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.23□□□□□ -1.73
KLF4O43474 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
KLF4O43474 MAPK10-286ENST00000641208 8747 ntBASIC4.23□□□□□ -1.73
KLF4O43474 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
KLF4O43474 AF127577.6-201ENST00000623352 2191 ntBASIC4.23□□□□□ -1.73
KLF4O43474 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KLF4O43474 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
KLF4O43474 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
KLF4O43474 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 178.3 ms