Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AL138825.1-201ENST00000618587 192 ntBASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 AL732372.2-225ENST00000642124 456 ntBASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TMEM88BA6NKF7 AC007785.2-201ENST00000598627 1916 ntBASIC5.25□□□□□ -1.57
TMEM88BA6NKF7 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
TMEM88BA6NKF7 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.25□□□□□ -1.57
TMEM88BA6NKF7 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TMEM88BA6NKF7 Y_RNA.133-201ENST00000363428 110 ntBASIC5.25□□□□□ -1.57
TMEM88BA6NKF7 SNORA73.2-201ENST00000364946 201 ntBASIC5.25□□□□□ -1.57
TMEM88BA6NKF7 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TMEM88BA6NKF7 ADAM24P-201ENST00000398655 2101 ntBASIC5.25□□□□□ -1.57
TMEM88BA6NKF7 NDUFB4P4-201ENST00000404822 243 ntBASIC5.25□□□□□ -1.57
TMEM88BA6NKF7 RPL23AP52-201ENST00000439311 478 ntBASIC5.25□□□□□ -1.57
TMEM88BA6NKF7 Z82210.1-201ENST00000440037 231 ntBASIC5.25□□□□□ -1.57
TMEM88BA6NKF7 AL645939.1-201ENST00000453429 797 ntBASIC5.25□□□□□ -1.57
TMEM88BA6NKF7 RPL12P25-201ENST00000455592 494 ntBASIC5.25□□□□□ -1.57
TMEM88BA6NKF7 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.25□□□□□ -1.57
TMEM88BA6NKF7 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.25□□□□□ -1.57
TMEM88BA6NKF7 AC011471.1-201ENST00000585766 187 ntBASIC5.25□□□□□ -1.57
TMEM88BA6NKF7 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.25□□□□□ -1.57
TMEM88BA6NKF7 AC004852.3-201ENST00000614131 326 ntBASIC5.25□□□□□ -1.57
TMEM88BA6NKF7 FP236240.3-201ENST00000623061 327 ntBASIC5.25□□□□□ -1.57
TMEM88BA6NKF7 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TMEM88BA6NKF7 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
TMEM88BA6NKF7 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TMEM88BA6NKF7 AC073346.2-201ENST00000624724 2058 ntBASIC5.25□□□□□ -1.57
TMEM88BA6NKF7 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
TMEM88BA6NKF7 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TMEM88BA6NKF7 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
TMEM88BA6NKF7 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TMEM88BA6NKF7 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 AL079305.1-201ENST00000623159 3008 ntBASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 AC005592.1-201ENST00000566527 1640 ntBASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 Y_RNA.39-201ENST00000362620 98 ntBASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 RNA5SP124-201ENST00000362739 110 ntBASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 AL513475.1-201ENST00000406602 315 ntBASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 ISCUP1-201ENST00000454451 448 ntBASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 AP000942.1-201ENST00000463969 747 ntBASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 AC133134.1-201ENST00000466800 359 ntBASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 AC128713.1-201ENST00000471495 306 ntBASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 RNA5SP49-201ENST00000516450 115 ntBASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 AC025755.1-201ENST00000521306 278 ntBASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 AC040958.1-201ENST00000561102 201 ntBASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 SUB1P3-201ENST00000564581 315 ntBASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 AL162373.1-201ENST00000620433 407 ntBASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TMEM88BA6NKF7 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TMEM88BA6NKF7 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TMEM88BA6NKF7 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.23□□□□□ -1.57
TMEM88BA6NKF7 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TMEM88BA6NKF7 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
TMEM88BA6NKF7 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TMEM88BA6NKF7 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
TMEM88BA6NKF7 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
TMEM88BA6NKF7 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TMEM88BA6NKF7 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TMEM88BA6NKF7 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.23□□□□□ -1.57
TMEM88BA6NKF7 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.23□□□□□ -1.57
TMEM88BA6NKF7 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
TMEM88BA6NKF7 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TMEM88BA6NKF7 Y_RNA.149-201ENST00000363558 117 ntBASIC5.23□□□□□ -1.57
TMEM88BA6NKF7 RNU6-1059P-201ENST00000363752 98 ntBASIC5.23□□□□□ -1.57
TMEM88BA6NKF7 RNU6-842P-201ENST00000384269 107 ntBASIC5.23□□□□□ -1.57
TMEM88BA6NKF7 RNU6-325P-201ENST00000411132 105 ntBASIC5.23□□□□□ -1.57
TMEM88BA6NKF7 RAB9AP3-201ENST00000412737 573 ntBASIC5.23□□□□□ -1.57
TMEM88BA6NKF7 AC108032.1-201ENST00000416706 207 ntBASIC5.23□□□□□ -1.57
TMEM88BA6NKF7 AC007560.1-201ENST00000426912 237 ntBASIC5.23□□□□□ -1.57
TMEM88BA6NKF7 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.23□□□□□ -1.57
TMEM88BA6NKF7 RAB9AP1-201ENST00000449393 573 ntBASIC5.23□□□□□ -1.57
TMEM88BA6NKF7 AL031274.1-201ENST00000450334 232 ntBASIC5.23□□□□□ -1.57
TMEM88BA6NKF7 ANP32BP2-201ENST00000454525 545 ntBASIC5.23□□□□□ -1.57
TMEM88BA6NKF7 AL583843.1-201ENST00000456070 346 ntBASIC5.23□□□□□ -1.57
TMEM88BA6NKF7 RNU6-475P-201ENST00000516073 104 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 162.6 ms