RNA–Protein interactions for RNA: ENST00000619128.4

PSMD1-213, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PSMD1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-213ENST00000619128 NISCHQ9Y2I1 1504 aa9.41□□□□□ -0.9
PSMD1-213ENST00000619128 CHIC1Q5VXU3 224 aa8.83□□□□□ -1
PSMD1-213ENST00000619128 AEBP2Q6ZN18 517 aaPredicted RBP8.59□□□□□ -1.04
PSMD1-213ENST00000619128 EHMT2Q96KQ7 1210 aa8.41□□□□□ -1.06
PSMD1-213ENST00000619128 SLC24A1O60721 1099 aa8.37□□□□□ -1.07
PSMD1-213ENST00000619128 PELP1Q8IZL8 1130 aaKnown RBP8.32□□□□□ -1.08
PSMD1-213ENST00000619128 CCDC180Q9P1Z9 1646 aa8.17□□□□□ -1.1
PSMD1-213ENST00000619128 MYT1Q01538 1121 aa8.14□□□□□ -1.11
PSMD1-213ENST00000619128 HRCP23327 699 aa8.13□□□□□ -1.11
PSMD1-213ENST00000619128 PHF23Q9BUL5 403 aaPredicted RBP8.11□□□□□ -1.11
PSMD1-213ENST00000619128 PLPPR3Q6T4P5 718 aa8.1□□□□□ -1.11
PSMD1-213ENST00000619128 ZCCHC6Q5VYS8 1495 aaKnown RBP8.02□□□□□ -1.13
PSMD1-213ENST00000619128 DCAF1Q9Y4B6 1507 aa7.99□□□□□ -1.13
PSMD1-213ENST00000619128 MYO15BQ96JP2 1530 aa7.89□□□□□ -1.15
PSMD1-213ENST00000619128 RTN4Q9NQC3 1192 aaKnown RBP7.88□□□□□ -1.15
PSMD1-213ENST00000619128 TTBK1Q5TCY1 1321 aaPredicted RBP7.86□□□□□ -1.15
PSMD1-213ENST00000619128 KCNA4P22459 653 aa7.77□□□□□ -1.17
PSMD1-213ENST00000619128 CSRNP3Q8WYN3 585 aa7.73□□□□□ -1.17
PSMD1-213ENST00000619128 SCAF1Q9H7N4 1312 aaKnown RBP7.7□□□□□ -1.18
PSMD1-213ENST00000619128 ZEB1P37275 1124 aaPredicted RBP7.63□□□□□ -1.19
PSMD1-213ENST00000619128 ABCC9O60706 1549 aa7.59□□□□□ -1.19
PSMD1-213ENST00000619128 SHROOM4Q9ULL8 1493 aa7.59□□□□□ -1.19
PSMD1-213ENST00000619128 PPARGC1BQ86YN6 1023 aaKnown RBP7.58□□□□□ -1.2
PSMD1-213ENST00000619128 PRKCSHP14314 528 aaPredicted RBP7.57□□□□□ -1.2
PSMD1-213ENST00000619128 SUPT5HO00267 1087 aaKnown RBP7.56□□□□□ -1.2
PSMD1-213ENST00000619128 DCAF8L2P0C7V8 631 aa7.53□□□□□ -1.2
PSMD1-213ENST00000619128 TRIM26Q12899 539 aaPredicted RBP7.5□□□□□ -1.21
PSMD1-213ENST00000619128 ACIN1Q9UKV3 1341 aaKnown RBP7.5□□□□□ -1.21
PSMD1-213ENST00000619128 RB1CC1Q8TDY2 1594 aa7.48□□□□□ -1.21
PSMD1-213ENST00000619128 PCGF6Q9BYE7 350 aa7.48□□□□□ -1.21
PSMD1-213ENST00000619128 NACADO15069 1562 aa7.46□□□□□ -1.22
PSMD1-213ENST00000619128 ADRA2BP18089 450 aa7.43□□□□□ -1.22
PSMD1-213ENST00000619128 AMER1Q5JTC6 1135 aaPredicted RBP7.43□□□□□ -1.22
PSMD1-213ENST00000619128 RSF1Q96T23 1441 aaPredicted RBP7.41□□□□□ -1.22
PSMD1-213ENST00000619128 NCBP3Q53F19 620 aaKnown RBP7.36□□□□□ -1.23
PSMD1-213ENST00000619128 CLSPNQ9HAW4 1339 aa7.36□□□□□ -1.23
PSMD1-213ENST00000619128 SLC4A1APQ9BWU0 796 aaKnown RBP7.35□□□□□ -1.23
PSMD1-213ENST00000619128 NEUROD1Q13562 356 aa7.35□□□□□ -1.23
PSMD1-213ENST00000619128 BAZ1AQ9NRL2 1556 aaPredicted RBP7.3□□□□□ -1.24
PSMD1-213ENST00000619128 EEA1Q15075 1411 aa7.29□□□□□ -1.24
PSMD1-213ENST00000619128 CENPBP07199 599 aaPredicted RBP7.28□□□□□ -1.24
PSMD1-213ENST00000619128 EIF4G1Q04637 1599 aaKnown RBP7.28□□□□□ -1.24
PSMD1-213ENST00000619128 WRNQ14191 1432 aaPredicted RBP eCLIP7.28□□□□□ -1.24
PSMD1-213ENST00000619128 APLP2Q06481 763 aa7.27□□□□□ -1.25
PSMD1-213ENST00000619128 TRIM41Q8WV44 630 aa7.27□□□□□ -1.25
PSMD1-213ENST00000619128 SCRIBQ14160 1630 aa7.27□□□□□ -1.25
PSMD1-213ENST00000619128 DAXXQ9UER7 740 aaPredicted RBP7.26□□□□□ -1.25
PSMD1-213ENST00000619128 BCL11AQ9H165 835 aa7.26□□□□□ -1.25
PSMD1-213ENST00000619128 GTF3C3Q9Y5Q9 886 aa7.26□□□□□ -1.25
PSMD1-213ENST00000619128 ZBTB22O15209 634 aa7.24□□□□□ -1.25
PSMD1-213ENST00000619128 TOP2AP11388 1531 aaKnown RBP7.22□□□□□ -1.25
PSMD1-213ENST00000619128 TIMELESSQ9UNS1 1208 aa7.21□□□□□ -1.25
PSMD1-213ENST00000619128 ANP32EQ9BTT0 268 aa7.2□□□□□ -1.26
PSMD1-213ENST00000619128 FAM9AQ8IZU1 332 aaPredicted RBP7.19□□□□□ -1.26
PSMD1-213ENST00000619128 MROH2BQ7Z745 1585 aa7.18□□□□□ -1.26
PSMD1-213ENST00000619128 LOC105371045A0A1W2PR82 267 aa7.18□□□□□ -1.26
PSMD1-213ENST00000619128 PEG3Q9GZU2 1588 aa7.16□□□□□ -1.26
PSMD1-213ENST00000619128 ERICH6Q7L0X2 663 aa7.16□□□□□ -1.26
PSMD1-213ENST00000619128 TNIKQ9UKE5 1360 aa7.15□□□□□ -1.26
PSMD1-213ENST00000619128 POTEDQ86YR6 584 aa7.15□□□□□ -1.26
PSMD1-213ENST00000619128 SMARCA4P51532 1647 aa7.14□□□□□ -1.27
PSMD1-213ENST00000619128 TULP1O00294 542 aaPredicted RBP7.13□□□□□ -1.27
PSMD1-213ENST00000619128 WIZO95785 1651 aa7.13□□□□□ -1.27
PSMD1-213ENST00000619128 TAOK2Q9UL54 1235 aa7.12□□□□□ -1.27
PSMD1-213ENST00000619128 DIEXFQ68CQ4 756 aaKnown RBP7.11□□□□□ -1.27
PSMD1-213ENST00000619128 CECR2Q9BXF3 1484 aa7.11□□□□□ -1.27
PSMD1-213ENST00000619128 SMARCA2P51531 1590 aa7.1□□□□□ -1.27
PSMD1-213ENST00000619128 KIF21BO75037 1637 aa7.1□□□□□ -1.27
PSMD1-213ENST00000619128 BAZ1BQ9UIG0 1483 aaKnown RBP7.1□□□□□ -1.27
PSMD1-213ENST00000619128 TPRNQ4KMQ1 711 aa7.1□□□□□ -1.27
PSMD1-213ENST00000619128 GOLGA3Q08378 1498 aa7.07□□□□□ -1.28
PSMD1-213ENST00000619128 TSHZ2Q9NRE2 1034 aa7.06□□□□□ -1.28
PSMD1-213ENST00000619128 CCDC88BA6NC98 1476 aa7.04□□□□□ -1.28
PSMD1-213ENST00000619128 CEP164Q9UPV0 1460 aa7.04□□□□□ -1.28
PSMD1-213ENST00000619128 ZNF316A6NFI3 1004 aaPredicted RBP7.04□□□□□ -1.28
PSMD1-213ENST00000619128 CEP162Q5TB80 1403 aa7.04□□□□□ -1.28
PSMD1-213ENST00000619128 PPP6R1Q9UPN7 881 aa7.04□□□□□ -1.28
PSMD1-213ENST00000619128 MYT1LQ9UL68 1186 aa7.01□□□□□ -1.29
PSMD1-213ENST00000619128 UNC13AQ9UPW8 1703 aa7.01□□□□□ -1.29
PSMD1-213ENST00000619128 SUPT16HQ9Y5B9 1047 aaKnown RBP7.01□□□□□ -1.29
PSMD1-213ENST00000619128 ERICH3Q5RHP9 1530 aa7□□□□□ -1.29
PSMD1-213ENST00000619128 HAP1P54257 671 aaPredicted RBP7□□□□□ -1.29
PSMD1-213ENST00000619128 PABPN1Q86U42 306 aaKnown RBP eCLIP6.99□□□□□ -1.29
PSMD1-213ENST00000619128 CUX2O14529 1486 aa6.98□□□□□ -1.29
PSMD1-213ENST00000619128 NPM3O75607 178 aaKnown RBP6.98□□□□□ -1.29
PSMD1-213ENST00000619128 CCER1Q8TC90 406 aaPredicted RBP6.98□□□□□ -1.29
PSMD1-213ENST00000619128 VPS8Q8N3P4 1428 aa6.96□□□□□ -1.29
PSMD1-213ENST00000619128 PLCB2Q00722 1185 aa6.96□□□□□ -1.3
PSMD1-213ENST00000619128 FKBP8Q14318 412 aa6.96□□□□□ -1.3
PSMD1-213ENST00000619128 BIVM-ERCC5R4GMW8 1640 aa6.96□□□□□ -1.3
PSMD1-213ENST00000619128 FANCIQ9NVI1 1328 aa6.94□□□□□ -1.3
PSMD1-213ENST00000619128 MAP3K1Q13233 1512 aa6.94□□□□□ -1.3
PSMD1-213ENST00000619128 ERICH6BQ5W0A0 696 aa6.94□□□□□ -1.3
PSMD1-213ENST00000619128 BCANQ96GW7 911 aa6.94□□□□□ -1.3
PSMD1-213ENST00000619128 TOP2BQ02880 1626 aa6.93□□□□□ -1.3
PSMD1-213ENST00000619128 BICRAQ9NZM4 1560 aa6.92□□□□□ -1.3
PSMD1-213ENST00000619128 ABCC8Q09428 1581 aa6.92□□□□□ -1.3
PSMD1-213ENST00000619128 HMGXB3Q12766 1538 aa6.91□□□□□ -1.3
PSMD1-213ENST00000619128 MIER1Q8N108 512 aa6.9□□□□□ -1.3
PSMD1-213ENST00000619128 DNAJC5BQ9UF47 199 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms