Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL1A2P08123 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.95■□□□□ 0.94
COL1A2P08123 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL1A2P08123 STARP1-201ENST00000397973 869 ntBASIC20.95■□□□□ 0.94
COL1A2P08123 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.95■□□□□ 0.94
COL1A2P08123 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.95■□□□□ 0.94
COL1A2P08123 MCCD1P1-208ENST00000445732 328 ntBASIC20.95■□□□□ 0.94
COL1A2P08123 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.95■□□□□ 0.94
COL1A2P08123 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL1A2P08123 AC091076.1-201ENST00000610741 619 ntBASIC20.95■□□□□ 0.94
COL1A2P08123 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL1A2P08123 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL1A2P08123 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.95■□□□□ 0.94
COL1A2P08123 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
COL1A2P08123 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL1A2P08123 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL1A2P08123 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL1A2P08123 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.94■□□□□ 0.94
COL1A2P08123 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
COL1A2P08123 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.94■□□□□ 0.94
COL1A2P08123 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL1A2P08123 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.94■□□□□ 0.94
COL1A2P08123 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL1A2P08123 KRT18P38-201ENST00000449496 1282 ntBASIC20.94■□□□□ 0.94
COL1A2P08123 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.94■□□□□ 0.94
COL1A2P08123 AL671277.2-201ENST00000458060 996 ntBASIC20.94■□□□□ 0.94
COL1A2P08123 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.94■□□□□ 0.94
COL1A2P08123 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.94■□□□□ 0.94
COL1A2P08123 GCSHP2-201ENST00000560971 527 ntBASIC20.94■□□□□ 0.94
COL1A2P08123 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL1A2P08123 MIR3180-5-201ENST00000583743 153 ntBASIC20.94■□□□□ 0.94
COL1A2P08123 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
COL1A2P08123 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.94■□□□□ 0.94
COL1A2P08123 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL1A2P08123 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL1A2P08123 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL1A2P08123 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL1A2P08123 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL1A2P08123 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL1A2P08123 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
COL1A2P08123 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL1A2P08123 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.93■□□□□ 0.94
COL1A2P08123 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL1A2P08123 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL1A2P08123 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.93■□□□□ 0.94
COL1A2P08123 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.93■□□□□ 0.94
COL1A2P08123 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.93■□□□□ 0.94
COL1A2P08123 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.93■□□□□ 0.94
COL1A2P08123 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL1A2P08123 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
COL1A2P08123 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.93■□□□□ 0.94
COL1A2P08123 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.93■□□□□ 0.94
COL1A2P08123 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.93■□□□□ 0.94
COL1A2P08123 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.93■□□□□ 0.94
COL1A2P08123 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
COL1A2P08123 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.93■□□□□ 0.94
COL1A2P08123 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.93■□□□□ 0.94
COL1A2P08123 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL1A2P08123 AC036111.1-201ENST00000533973 1582 ntBASIC20.93■□□□□ 0.94
COL1A2P08123 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
COL1A2P08123 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.93■□□□□ 0.94
COL1A2P08123 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL1A2P08123 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
COL1A2P08123 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL1A2P08123 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.92■□□□□ 0.94
COL1A2P08123 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL1A2P08123 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.92■□□□□ 0.94
COL1A2P08123 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL1A2P08123 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.92■□□□□ 0.94
COL1A2P08123 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL1A2P08123 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL1A2P08123 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL1A2P08123 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL1A2P08123 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL1A2P08123 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL1A2P08123 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL1A2P08123 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL1A2P08123 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.92■□□□□ 0.94
COL1A2P08123 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL1A2P08123 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
COL1A2P08123 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL1A2P08123 AL358472.4-201ENST00000633140 710 ntBASIC20.92■□□□□ 0.94
COL1A2P08123 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
COL1A2P08123 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL1A2P08123 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.92■□□□□ 0.94
COL1A2P08123 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL1A2P08123 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL1A2P08123 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL1A2P08123 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.91■□□□□ 0.94
COL1A2P08123 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.91■□□□□ 0.94
COL1A2P08123 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL1A2P08123 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL1A2P08123 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.91■□□□□ 0.94
COL1A2P08123 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.91■□□□□ 0.94
COL1A2P08123 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
COL1A2P08123 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL1A2P08123 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL1A2P08123 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL1A2P08123 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
COL1A2P08123 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms