Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.39□□□□□ -1.55
TMEM88BA6NKF7 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TMEM88BA6NKF7 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TMEM88BA6NKF7 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TMEM88BA6NKF7 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.39□□□□□ -1.55
TMEM88BA6NKF7 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 MIR412-201ENST00000362142 91 ntBASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 RNU6-741P-201ENST00000383889 107 ntBASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 RNU6-933P-201ENST00000384424 107 ntBASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 AC093578.1-201ENST00000415219 368 ntBASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 AC018865.2-201ENST00000423631 129 ntBASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 AC015911.1-201ENST00000495111 156 ntBASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 SUMO2P6-201ENST00000505273 288 ntBASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 RNU6-1073P-201ENST00000517182 106 ntBASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 RN7SL703P-201ENST00000578485 302 ntBASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 RN7SL435P-201ENST00000584418 282 ntBASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 BNIP3P16-201ENST00000589779 534 ntBASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 AP000787.2-201ENST00000604432 568 ntBASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 ELOCP5-201ENST00000604924 333 ntBASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 RMST_4.1-201ENST00000616886 107 ntBASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 AC140479.6-201ENST00000633535 357 ntBASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 AC012442.3-202ENST00000636742 206 ntBASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 AP002512.4-202ENST00000641599 4530 ntBASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 AC006971.1-201ENST00000407916 4486 ntBASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
TMEM88BA6NKF7 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 Y_RNA.158-201ENST00000363651 101 ntBASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 RNU6-1279P-201ENST00000383917 103 ntBASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 Y_RNA.428-201ENST00000384078 102 ntBASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 RNU6-1032P-201ENST00000384100 107 ntBASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 RNU6-306P-201ENST00000384617 107 ntBASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 MIR491-201ENST00000384877 84 ntBASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 MIR517A-201ENST00000385001 87 ntBASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 AL445529.1-201ENST00000398713 389 ntBASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 U3.35-201ENST00000408405 208 ntBASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 RNU6-1025P-201ENST00000410629 104 ntBASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 RPL7AP61-201ENST00000443410 636 ntBASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 BTF3P15-201ENST00000455606 336 ntBASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 AC018437.1-201ENST00000492214 406 ntBASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 PTP4A1P4-201ENST00000512479 322 ntBASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 RNU6-470P-201ENST00000515954 104 ntBASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 TRAV8-5-201ENST00000537369 341 ntBASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 AC113403.1-201ENST00000604910 193 ntBASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 SNORD39.4-201ENST00000620099 78 ntBASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 ANKRD26P2-201ENST00000445530 1710 ntBASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
TMEM88BA6NKF7 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 AC008568.2-201ENST00000623862 2313 ntBASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 Y_RNA.463-201ENST00000384271 102 ntBASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 RN7SKP177-201ENST00000410567 355 ntBASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 MCFD2P1-201ENST00000417812 300 ntBASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.36□□□□□ -1.55
TMEM88BA6NKF7 EIF4EP1-201ENST00000422311 642 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms