Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RAC1P7-201ENST00000445367 377 ntBASIC4.62□□□□□ -1.67
EPHB3P54753 RPL7L1P1-201ENST00000448259 785 ntBASIC4.62□□□□□ -1.67
EPHB3P54753 GSTA11P-201ENST00000452866 669 ntBASIC4.62□□□□□ -1.67
EPHB3P54753 AC068305.1-201ENST00000497406 726 ntBASIC4.62□□□□□ -1.67
EPHB3P54753 FTH1P24-201ENST00000503502 462 ntBASIC4.62□□□□□ -1.67
EPHB3P54753 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.62□□□□□ -1.67
EPHB3P54753 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.62□□□□□ -1.67
EPHB3P54753 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.62□□□□□ -1.67
EPHB3P54753 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.62□□□□□ -1.67
EPHB3P54753 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.62□□□□□ -1.67
EPHB3P54753 AC024619.4-201ENST00000580924 316 ntBASIC4.62□□□□□ -1.67
EPHB3P54753 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.62□□□□□ -1.67
EPHB3P54753 AC104695.3-201ENST00000604052 296 ntBASIC4.62□□□□□ -1.67
EPHB3P54753 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.62□□□□□ -1.67
EPHB3P54753 MTND5P27-201ENST00000428871 1720 ntBASIC4.62□□□□□ -1.67
EPHB3P54753 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
EPHB3P54753 AC007529.1-201ENST00000418574 2178 ntBASIC4.62□□□□□ -1.67
EPHB3P54753 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
EPHB3P54753 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
EPHB3P54753 MAPK10-304ENST00000641341 3984 ntBASIC4.62□□□□□ -1.67
EPHB3P54753 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
EPHB3P54753 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.62□□□□□ -1.67
EPHB3P54753 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
EPHB3P54753 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
EPHB3P54753 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.61□□□□□ -1.67
EPHB3P54753 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.61□□□□□ -1.67
EPHB3P54753 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
EPHB3P54753 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
EPHB3P54753 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.61□□□□□ -1.67
EPHB3P54753 RNU6-209P-201ENST00000384118 107 ntBASIC4.61□□□□□ -1.67
EPHB3P54753 RNU4-46P-201ENST00000410818 138 ntBASIC4.61□□□□□ -1.67
EPHB3P54753 AC080125.1-201ENST00000414888 684 ntBASIC4.61□□□□□ -1.67
EPHB3P54753 RPL7P10-201ENST00000417407 739 ntBASIC4.61□□□□□ -1.67
EPHB3P54753 AL139095.3-201ENST00000419672 1203 ntBASIC4.61□□□□□ -1.67
EPHB3P54753 Z74021.1-201ENST00000423610 407 ntBASIC4.61□□□□□ -1.67
EPHB3P54753 PSMA6P3-201ENST00000428242 164 ntBASIC4.61□□□□□ -1.67
EPHB3P54753 RPL21P91-201ENST00000429231 479 ntBASIC4.61□□□□□ -1.67
EPHB3P54753 RPL23AP52-201ENST00000439311 478 ntBASIC4.61□□□□□ -1.67
EPHB3P54753 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.61□□□□□ -1.67
EPHB3P54753 AC087879.1-201ENST00000474343 374 ntBASIC4.61□□□□□ -1.67
EPHB3P54753 RPL21P93-201ENST00000480465 489 ntBASIC4.61□□□□□ -1.67
EPHB3P54753 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.61□□□□□ -1.67
EPHB3P54753 RPL22P13-201ENST00000493291 347 ntBASIC4.61□□□□□ -1.67
EPHB3P54753 AC093767.1-201ENST00000504523 156 ntBASIC4.61□□□□□ -1.67
EPHB3P54753 Y_RNA.661-201ENST00000516003 99 ntBASIC4.61□□□□□ -1.67
EPHB3P54753 RNU6-189P-201ENST00000516120 101 ntBASIC4.61□□□□□ -1.67
EPHB3P54753 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
EPHB3P54753 TRAV8-5-201ENST00000537369 341 ntBASIC4.61□□□□□ -1.67
EPHB3P54753 GNAI2P1-201ENST00000541815 315 ntBASIC4.61□□□□□ -1.67
EPHB3P54753 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.61□□□□□ -1.67
EPHB3P54753 AC068446.3-201ENST00000555285 382 ntBASIC4.61□□□□□ -1.67
EPHB3P54753 AC025884.1-201ENST00000556034 378 ntBASIC4.61□□□□□ -1.67
EPHB3P54753 TVP23BP1-201ENST00000557500 617 ntBASIC4.61□□□□□ -1.67
EPHB3P54753 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.61□□□□□ -1.67
EPHB3P54753 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.61□□□□□ -1.67
EPHB3P54753 MIR4512-201ENST00000583257 77 ntBASIC4.61□□□□□ -1.67
EPHB3P54753 AL355365.1-201ENST00000616480 294 ntBASIC4.61□□□□□ -1.67
EPHB3P54753 MIR8069-1-201ENST00000616627 86 ntBASIC4.61□□□□□ -1.67
EPHB3P54753 ZYXP1-201ENST00000617638 118 ntBASIC4.61□□□□□ -1.67
EPHB3P54753 MIR8069-2-201ENST00000621412 86 ntBASIC4.61□□□□□ -1.67
EPHB3P54753 AC092608.2-201ENST00000624427 218 ntBASIC4.61□□□□□ -1.67
EPHB3P54753 MAPK10-303ENST00000641324 3959 ntBASIC4.61□□□□□ -1.67
EPHB3P54753 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.61□□□□□ -1.67
EPHB3P54753 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.61□□□□□ -1.67
EPHB3P54753 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
EPHB3P54753 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
EPHB3P54753 AL672167.1-204ENST00000641875 3017 ntBASIC4.61□□□□□ -1.67
EPHB3P54753 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.61□□□□□ -1.67
EPHB3P54753 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
EPHB3P54753 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
EPHB3P54753 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
EPHB3P54753 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
EPHB3P54753 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.6□□□□□ -1.67
EPHB3P54753 RNU6-238P-201ENST00000363313 106 ntBASIC4.6□□□□□ -1.67
EPHB3P54753 RNA5SP28-201ENST00000363841 119 ntBASIC4.6□□□□□ -1.67
EPHB3P54753 RNU1-115P-201ENST00000365329 160 ntBASIC4.6□□□□□ -1.67
EPHB3P54753 RNU1-63P-201ENST00000383902 164 ntBASIC4.6□□□□□ -1.67
EPHB3P54753 RNU6-1109P-201ENST00000391187 107 ntBASIC4.6□□□□□ -1.67
EPHB3P54753 SNORA57.1-201ENST00000391227 145 ntBASIC4.6□□□□□ -1.67
EPHB3P54753 MIR921-201ENST00000401133 56 ntBASIC4.6□□□□□ -1.67
EPHB3P54753 AL136372.1-201ENST00000403060 228 ntBASIC4.6□□□□□ -1.67
EPHB3P54753 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.6□□□□□ -1.67
EPHB3P54753 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.6□□□□□ -1.67
EPHB3P54753 AC016696.1-201ENST00000446949 318 ntBASIC4.6□□□□□ -1.67
EPHB3P54753 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.6□□□□□ -1.67
EPHB3P54753 RNA5SP103-201ENST00000459503 118 ntBASIC4.6□□□□□ -1.67
EPHB3P54753 PLGLA-201ENST00000465668 449 ntBASIC4.6□□□□□ -1.67
EPHB3P54753 AL136126.1-201ENST00000473603 402 ntBASIC4.6□□□□□ -1.67
EPHB3P54753 AC092451.1-201ENST00000480211 153 ntBASIC4.6□□□□□ -1.67
EPHB3P54753 AL139099.1-201ENST00000497398 403 ntBASIC4.6□□□□□ -1.67
EPHB3P54753 AC116337.1-201ENST00000509680 687 ntBASIC4.6□□□□□ -1.67
EPHB3P54753 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.6□□□□□ -1.67
EPHB3P54753 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.6□□□□□ -1.67
EPHB3P54753 AC024224.1-201ENST00000538284 609 ntBASIC4.6□□□□□ -1.67
EPHB3P54753 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.6□□□□□ -1.67
EPHB3P54753 AL354984.3-201ENST00000604803 325 ntBASIC4.6□□□□□ -1.67
EPHB3P54753 AC025034.2-201ENST00000623264 286 ntBASIC4.6□□□□□ -1.67
EPHB3P54753 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.6□□□□□ -1.67
EPHB3P54753 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
EPHB3P54753 AC104118.1-201ENST00000607625 1589 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 222.7 ms