Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.12□□□□□ -1.59
NFKB1P19838 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NFKB1P19838 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NFKB1P19838 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
NFKB1P19838 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.12□□□□□ -1.59
NFKB1P19838 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.12□□□□□ -1.59
NFKB1P19838 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NFKB1P19838 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NFKB1P19838 RPL23P2-201ENST00000320371 421 ntBASIC5.12□□□□□ -1.59
NFKB1P19838 Y_RNA.297-201ENST00000364950 91 ntBASIC5.12□□□□□ -1.59
NFKB1P19838 RNU6-933P-201ENST00000384424 107 ntBASIC5.12□□□□□ -1.59
NFKB1P19838 SNORA70.10-201ENST00000384515 134 ntBASIC5.12□□□□□ -1.59
NFKB1P19838 Y_RNA.533-201ENST00000384596 114 ntBASIC5.12□□□□□ -1.59
NFKB1P19838 AL513475.1-201ENST00000406602 315 ntBASIC5.12□□□□□ -1.59
NFKB1P19838 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.12□□□□□ -1.59
NFKB1P19838 U3.36-201ENST00000408418 213 ntBASIC5.12□□□□□ -1.59
NFKB1P19838 U3.42-201ENST00000408746 214 ntBASIC5.12□□□□□ -1.59
NFKB1P19838 AC007738.1-201ENST00000413892 348 ntBASIC5.12□□□□□ -1.59
NFKB1P19838 CYCSP33-201ENST00000414485 327 ntBASIC5.12□□□□□ -1.59
NFKB1P19838 AC092423.1-201ENST00000430165 186 ntBASIC5.12□□□□□ -1.59
NFKB1P19838 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC5.12□□□□□ -1.59
NFKB1P19838 AL450023.3-201ENST00000440592 271 ntBASIC5.12□□□□□ -1.59
NFKB1P19838 RPL34P20-201ENST00000442771 351 ntBASIC5.12□□□□□ -1.59
NFKB1P19838 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.12□□□□□ -1.59
NFKB1P19838 IGHV5-78-201ENST00000450948 295 ntBASIC5.12□□□□□ -1.59
NFKB1P19838 AC097484.1-201ENST00000471148 389 ntBASIC5.12□□□□□ -1.59
NFKB1P19838 HMGN2P13-201ENST00000476476 274 ntBASIC5.12□□□□□ -1.59
NFKB1P19838 BX284632.1-201ENST00000478218 541 ntBASIC5.12□□□□□ -1.59
NFKB1P19838 SNRPCP2-201ENST00000504370 475 ntBASIC5.12□□□□□ -1.59
NFKB1P19838 SNORA31.6-201ENST00000516241 130 ntBASIC5.12□□□□□ -1.59
NFKB1P19838 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.12□□□□□ -1.59
NFKB1P19838 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.12□□□□□ -1.59
NFKB1P19838 MIR5701-3-201ENST00000578890 82 ntBASIC5.12□□□□□ -1.59
NFKB1P19838 MIR5701-1-201ENST00000585138 82 ntBASIC5.12□□□□□ -1.59
NFKB1P19838 AC105254.2-201ENST00000603636 436 ntBASIC5.12□□□□□ -1.59
NFKB1P19838 SUMO2P15-201ENST00000604285 278 ntBASIC5.12□□□□□ -1.59
NFKB1P19838 MIR5701-2-201ENST00000615634 82 ntBASIC5.12□□□□□ -1.59
NFKB1P19838 MIR6826-201ENST00000617808 98 ntBASIC5.12□□□□□ -1.59
NFKB1P19838 SNORD39.4-201ENST00000620099 78 ntBASIC5.12□□□□□ -1.59
NFKB1P19838 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.12□□□□□ -1.59
NFKB1P19838 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.12□□□□□ -1.59
NFKB1P19838 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
NFKB1P19838 PCAT14-202ENST00000627127 3935 ntBASIC5.12□□□□□ -1.59
NFKB1P19838 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NFKB1P19838 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.12□□□□□ -1.59
NFKB1P19838 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NFKB1P19838 ZNF285B-201ENST00000561698 1767 ntBASIC5.11□□□□□ -1.59
NFKB1P19838 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NFKB1P19838 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NFKB1P19838 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NFKB1P19838 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NFKB1P19838 SNURFL-201ENST00000309296 343 ntBASIC5.11□□□□□ -1.59
NFKB1P19838 RNU1-76P-201ENST00000362903 159 ntBASIC5.11□□□□□ -1.59
NFKB1P19838 U8.8-201ENST00000365399 135 ntBASIC5.11□□□□□ -1.59
NFKB1P19838 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.11□□□□□ -1.59
NFKB1P19838 HSPE1P8-201ENST00000406997 288 ntBASIC5.11□□□□□ -1.59
NFKB1P19838 RN7SKP229-201ENST00000410465 302 ntBASIC5.11□□□□□ -1.59
NFKB1P19838 AP000275.1-201ENST00000411943 390 ntBASIC5.11□□□□□ -1.59
NFKB1P19838 AC007098.1-201ENST00000420122 367 ntBASIC5.11□□□□□ -1.59
NFKB1P19838 DDX39BP1-205ENST00000422507 192 ntBASIC5.11□□□□□ -1.59
NFKB1P19838 AC096920.1-201ENST00000423991 241 ntBASIC5.11□□□□□ -1.59
NFKB1P19838 AC008065.1-201ENST00000428525 348 ntBASIC5.11□□□□□ -1.59
NFKB1P19838 RPS29P9-201ENST00000440360 171 ntBASIC5.11□□□□□ -1.59
NFKB1P19838 KNOP1P3-201ENST00000446933 426 ntBASIC5.11□□□□□ -1.59
NFKB1P19838 AL354714.3-201ENST00000447284 493 ntBASIC5.11□□□□□ -1.59
NFKB1P19838 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.11□□□□□ -1.59
NFKB1P19838 PPIAP21-201ENST00000464473 501 ntBASIC5.11□□□□□ -1.59
NFKB1P19838 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NFKB1P19838 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.11□□□□□ -1.59
NFKB1P19838 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.11□□□□□ -1.59
NFKB1P19838 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.11□□□□□ -1.59
NFKB1P19838 RNU6-1095P-201ENST00000516148 108 ntBASIC5.11□□□□□ -1.59
NFKB1P19838 RNU4-71P-201ENST00000516258 113 ntBASIC5.11□□□□□ -1.59
NFKB1P19838 SCARNA21.2-201ENST00000516600 166 ntBASIC5.11□□□□□ -1.59
NFKB1P19838 RN7SKP260-201ENST00000516907 149 ntBASIC5.11□□□□□ -1.59
NFKB1P19838 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.11□□□□□ -1.59
NFKB1P19838 AC073410.2-201ENST00000603240 332 ntBASIC5.11□□□□□ -1.59
NFKB1P19838 AL512624.1-201ENST00000613638 469 ntBASIC5.11□□□□□ -1.59
NFKB1P19838 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.11□□□□□ -1.59
NFKB1P19838 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
NFKB1P19838 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NFKB1P19838 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.1□□□□□ -1.59
NFKB1P19838 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.1□□□□□ -1.59
NFKB1P19838 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NFKB1P19838 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NFKB1P19838 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NFKB1P19838 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NFKB1P19838 Y_RNA.237-201ENST00000364439 102 ntBASIC5.1□□□□□ -1.59
NFKB1P19838 Y_RNA.352-201ENST00000365439 102 ntBASIC5.1□□□□□ -1.59
NFKB1P19838 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.1□□□□□ -1.59
NFKB1P19838 RNU6-662P-201ENST00000384253 104 ntBASIC5.1□□□□□ -1.59
NFKB1P19838 Y_RNA.534-201ENST00000384599 112 ntBASIC5.1□□□□□ -1.59
NFKB1P19838 SNORA66-201ENST00000384792 133 ntBASIC5.1□□□□□ -1.59
NFKB1P19838 SNORA69.1-201ENST00000390904 137 ntBASIC5.1□□□□□ -1.59
NFKB1P19838 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NFKB1P19838 ZNF299P-201ENST00000406845 1804 ntBASIC5.1□□□□□ -1.59
NFKB1P19838 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NFKB1P19838 AL353621.1-201ENST00000418219 243 ntBASIC5.1□□□□□ -1.59
NFKB1P19838 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.1□□□□□ -1.59
NFKB1P19838 HMGB1P27-201ENST00000431429 603 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms